Cow genome map
| Conread name: | Thy1-THY010090H02 |
| Conread position: | 62-548 |
| Cow position: | chr21:45297645-45297154 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 62-605 |
| Cow position: | chr21:30649881-30649326 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 27 |
| Conread position: | 62-803 |
| Cow position: | chr21:39796788-39797522 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 71-519 |
| Cow position: | chr21:14744577-14745014 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 297 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 127, 31 |
| Conread position: | 71-772 |
| Cow position: | chr21:436700-437382 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 31 |
| Conread position: | 72-799 |
| Cow position: | chr21:37612985-37613684 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 30 |
| Conread position: | 73-689 |
| Cow position: | chr21:32389534-32390111 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 403 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 182, 11 |
| Conread position: | 84-626 |
| Cow position: | chr21:30313018-30313557 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 87, 100 |
| Conread position: | 98-383 |
| Cow position: | chr21:45911283-45910986 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 79, 133 |
| Conread position: | 130-714 |
| Cow position: | chr21:4141261-4140689 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 364 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 92 |
| Conread position: | 131-685 |
| Cow position: | chr21:404256-403703 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 5 |
| Conread position: | 137-799 |
| Cow position: | chr21:40618562-40617911 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 419 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 140, 13 |
| Conread position: | 153-505 |
| Cow position: | chr21:20236340-20235989 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 113, 102 |
| Conread position: | 160-798 |
| Cow position: | chr21:27176718-27176100 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 73 |
| Conread position: | 160-799 |
| Cow position: | chr21:10093208-10093841 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 229 |
| Conread position: | 161-490 |
| Cow position: | chr21:44874261-44873932 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 72, 178 |
| Conread position: | 164-486 |
| Cow position: | chr21:45868734-45868422 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 138, 111 |
| Conread position: | 195-670 |
| Cow position: | chr21:25660885-25661374 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 308 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 107 |
| Conread position: | 208-517 |
| Cow position: | chr21:25293350-25293654 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 228-765 |
| Cow position: | chr21:30966474-30965934 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 154 |
| Conread position: | 258-572 |
| Cow position: | chr21:18787009-18786700 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 122 |
| Conread position: | 268-742 |
| Cow position: | chr21:31499513-31499979 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 306 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 33, 130 |
| Conread position: | 277-569 |
| Cow position: | chr21:30159543-30159257 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 202, 105 |
| Conread position: | 283-775 |
| Cow position: | chr21:81268-81757 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 320 |
| Conread position: | 296-625 |
| Cow position: | chr21:2419737-2420061 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 300-708 |
| Cow position: | chr21:37086722-37087115 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 300-801 |
| Cow position: | chr21:2289596-2290085 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 79 |
Show alignments to all cow chromosomes.