Cow genome map


           Conread name:
           Thy1-THY010090H02
        

               Conread position:
               61-270
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               107, 134
               

               Conread position:
               62-467
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               120, 40
               

               Conread position:
               62-517
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               310
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               104, 20
               

               Conread position:
               70-802
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               71-379
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               71-800
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 31
               

               Conread position:
               84-757
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               424
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               10, 222
               

               Conread position:
               87-434
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               183, 15
               

               Conread position:
               88-801
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               97-787
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 5
               

               Conread position:
               102-798
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               443
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               69, 166
               

               Conread position:
               108-496
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 72
               

               Conread position:
               108-568
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               291
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               137-775
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 39
               

               Conread position:
               160-539
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               145, 106
               

               Conread position:
               160-738
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 175
               

               Conread position:
               160-802
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 110
               

               Conread position:
               162-790
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               408
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               107, 57
               

               Conread position:
               204-370
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               210-792
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               380
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               73, 166
               

               Conread position:
               215-689
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               57, 77
               

               Conread position:
               227-538
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               245-738
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 145
               

               Conread position:
               251-675
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               283
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               38, 136
               

               Conread position:
               251-760
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               339
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               26, 140
               

               Conread position:
               252-759
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 258
               

               Conread position:
               257-797
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               265-757
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 121
               

               Conread position:
               266-598
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               300-490
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               29, 83
               

               Conread position:
               300-545
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               100, 82
               

               Conread position:
               302-792
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               177, 80
               

               Conread position:
               320-602
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               80, 62
               

               Conread position:
               323-772
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               299
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               77, 51
               
Show alignments to all cow chromosomes.