Cow genome map


           Conread name:
           Thy1-THY010090H02
        

               Conread position:
               61-729
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               428
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               62-791
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 45
               

               Conread position:
               62-803
               

               Cow position:
               
               

               Alignm length:
               767
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 40
               

               Conread position:
               63-755
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 39
               

               Conread position:
               71-353
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               81, 31
               

               Conread position:
               71-380
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               95, 11
               

               Conread position:
               71-383
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               106, 31
               

               Conread position:
               71-417
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               71-472
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               71-536
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 31
               

               Conread position:
               71-611
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               71-720
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 31
               

               Conread position:
               73-780
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               76-796
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 26
               

               Conread position:
               78-559
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               301
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               131, 181
               

               Conread position:
               82-798
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 26
               

               Conread position:
               84-772
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 14
               

               Conread position:
               87-761
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               427
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               165, 21
               

               Conread position:
               96-350
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               70, 6
               

               Conread position:
               102-729
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               108-738
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               407
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               42, 279
               

               Conread position:
               130-546
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               131-442
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               131-539
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 34
               

               Conread position:
               137-380
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               41, 65
               

               Conread position:
               159-762
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 32
               

               Conread position:
               160-793
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               414
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               112, 79
               

               Conread position:
               161-500
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               107, 58
               

               Conread position:
               161-797
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 80
               

               Conread position:
               166-505
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 95
               

               Conread position:
               196-761
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               205-799
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               391
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               6, 178
               

               Conread position:
               210-570
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 194
               

               Conread position:
               212-776
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               365
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               217-792
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 125
               

               Conread position:
               224-467
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               22, 163
               

               Conread position:
               228-801
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               372
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               46, 154
               

               Conread position:
               234-504
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               244-799
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               364
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               54, 135
               

               Conread position:
               258-760
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               323
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               267-755
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               47, 109
               

               Conread position:
               296-658
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               186, 93
               

               Conread position:
               296-758
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 78
               

               Conread position:
               300-799
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 71
               

               Conread position:
               301-540
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               177, 81
               

               Conread position:
               302-559
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               177, 77
               

               Conread position:
               302-715
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               106, 73
               

               Conread position:
               302-759
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 74
               

               Conread position:
               302-800
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               335
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               47, 60
               

               Conread position:
               310-548
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               90, 69
               

               Conread position:
               310-772
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 73
               

               Conread position:
               320-758
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 183
               

               Conread position:
               320-798
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               312
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               93, 76
               
Show alignments to all cow chromosomes.