Cow genome map
| Conread name: | Thy1-THY010090H02 |
| Conread position: | 23-691 |
| Cow position: | chr4:33198312-33197660 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 56-587 |
| Cow position: | chr4:2599566-2599023 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 62-288 |
| Cow position: | chr4:39221955-39222193 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 9 |
| Conread position: | 62-538 |
| Cow position: | chr4:67649208-67648726 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 320 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 173, 40 |
| Conread position: | 62-592 |
| Cow position: | chr4:51980004-51980545 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 9 |
| Conread position: | 62-802 |
| Cow position: | chr4:29134857-29134140 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 32 |
| Conread position: | 62-802 |
| Cow position: | chr4:44380735-44380001 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 62-802 |
| Cow position: | chr4:61080106-61080843 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 33 |
| Conread position: | 71-314 |
| Cow position: | chr4:36480734-36480482 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 71-501 |
| Cow position: | chr4:44081813-44082261 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 71-509 |
| Cow position: | chr4:62397145-62397582 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 61, 31 |
| Conread position: | 71-517 |
| Cow position: | chr4:59557416-59556960 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 88-789 |
| Cow position: | chr4:49906922-49907637 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 459 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 116, 305 |
| Conread position: | 102-550 |
| Cow position: | chr4:3331600-3331167 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 76, 200 |
| Conread position: | 125-705 |
| Cow position: | chr4:39233765-39233197 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 383 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 128-383 |
| Cow position: | chr4:35122968-35122708 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 147, 107 |
| Conread position: | 131-649 |
| Cow position: | chr4:52017920-52017402 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 318 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 81, 46 |
| Conread position: | 131-791 |
| Cow position: | chr4:50808977-50809633 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 160-792 |
| Cow position: | chr4:26625648-26625014 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 416 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 139, 36 |
| Conread position: | 161-399 |
| Cow position: | chr4:66635710-66635463 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 105, 66 |
| Conread position: | 164-383 |
| Cow position: | chr4:46293589-46293812 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 128, 42 |
| Conread position: | 164-565 |
| Cow position: | chr4:66327224-66327606 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 110, 221 |
| Conread position: | 182-802 |
| Cow position: | chr4:23381050-23380432 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 396 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 27 |
| Conread position: | 193-781 |
| Cow position: | chr4:20586365-20585785 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 359 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 182 |
| Conread position: | 199-586 |
| Cow position: | chr4:62418854-62419247 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 202-507 |
| Cow position: | chr4:67609377-67609676 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 144 |
| Conread position: | 206-544 |
| Cow position: | chr4:12613226-12613562 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 206-690 |
| Cow position: | chr4:45917886-45918367 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 207-799 |
| Cow position: | chr4:44046535-44047117 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 210-558 |
| Cow position: | chr4:13588721-13588381 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 91, 52 |
| Conread position: | 215-648 |
| Cow position: | chr4:43658035-43658460 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 301 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 64, 164 |
| Conread position: | 216-581 |
| Cow position: | chr4:30508212-30508580 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 53, 145 |
| Conread position: | 220-519 |
| Cow position: | chr4:35160963-35161253 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 50, 150 |
| Conread position: | 234-803 |
| Cow position: | chr4:46579069-46579632 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 131 |
| Conread position: | 247-759 |
| Cow position: | chr4:33496605-33497117 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 265-800 |
| Cow position: | chr4:49828293-49828808 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 341 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 120 |
| Conread position: | 267-606 |
| Cow position: | chr4:11498829-11499154 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 215, 115 |
| Conread position: | 296-548 |
| Cow position: | chr4:39018357-39018606 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 104, 75 |
| Conread position: | 298-799 |
| Cow position: | chr4:23889096-23888604 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 325 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 169, 84 |
| Conread position: | 299-759 |
| Cow position: | chr4:10044664-10044211 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 77 |
| Conread position: | 312-691 |
| Cow position: | chr4:5284725-5284350 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 124, 67 |
| Conread position: | 320-761 |
| Cow position: | chr4:19790248-19790673 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.