Cow genome map


           Conread name:
           Thy1-THY010090H02
        

               Conread position:
               59-776
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 10
               

               Conread position:
               61-635
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               358
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               107, 19
               

               Conread position:
               62-551
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               325
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               165, 34
               

               Conread position:
               62-558
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               333
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               213, 40
               

               Conread position:
               62-581
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               332
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               147, 15
               

               Conread position:
               70-803
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 38
               

               Conread position:
               71-342
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               71-362
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               71-435
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               275
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               71-509
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 31
               

               Conread position:
               71-517
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 31
               

               Conread position:
               71-718
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               71-774
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               71-802
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 31
               

               Conread position:
               75-799
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 27
               

               Conread position:
               82-766
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 20
               

               Conread position:
               84-555
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               89-538
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               91-508
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               280
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               94-495
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               275
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               57, 199
               

               Conread position:
               102-660
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               360
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 85
               

               Conread position:
               131-725
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 174
               

               Conread position:
               137-440
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               137-502
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               137, 29
               

               Conread position:
               137-770
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 252
               

               Conread position:
               148-633
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               303
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               29, 5
               

               Conread position:
               153-733
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 77
               

               Conread position:
               153-795
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               402
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               115, 234
               

               Conread position:
               154-771
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               391
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               235, 25
               

               Conread position:
               160-539
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               131, 101
               

               Conread position:
               160-696
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               348
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               142, 73
               

               Conread position:
               160-799
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 230
               

               Conread position:
               160-802
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 11
               

               Conread position:
               161-342
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               110, 139
               

               Conread position:
               161-542
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               106, 61
               

               Conread position:
               164-761
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               373
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               164-802
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 50
               

               Conread position:
               168-773
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               370
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               112, 139
               

               Conread position:
               187-572
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               76, 64
               

               Conread position:
               190-548
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 213
               

               Conread position:
               194-802
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 162
               

               Conread position:
               202-797
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 187
               

               Conread position:
               228-538
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 152
               

               Conread position:
               228-759
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 154
               

               Conread position:
               235-552
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 106
               

               Conread position:
               237-802
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               239-760
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               349
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               251-791
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               360
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               24, 140
               

               Conread position:
               252-738
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 130
               

               Conread position:
               254-697
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               293
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               22, 114
               

               Conread position:
               267-570
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 114
               

               Conread position:
               267-650
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               212, 118
               

               Conread position:
               267-760
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               313
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               273-673
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               272
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               29, 117
               

               Conread position:
               275-677
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 111
               

               Conread position:
               293-715
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               186, 210
               

               Conread position:
               293-715
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               186, 210
               

               Conread position:
               294-758
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               302
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               296-726
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               150, 89
               

               Conread position:
               296-760
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               186, 89
               

               Conread position:
               296-760
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               304
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               183, 89
               

               Conread position:
               302-799
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 41
               

               Conread position:
               302-799
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               98, 80
               

               Conread position:
               305-758
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               294
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               8, 92
               

               Conread position:
               308-744
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 70
               

               Conread position:
               318-716
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               137, 67
               
Show alignments to all cow chromosomes.