Cow genome map


           Conread name:
           Thy1-THY010090H02
        

               Conread position:
               36-505
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               317
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               61-732
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               418
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               62-738
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 37
               

               Conread position:
               62-792
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 40
               

               Conread position:
               68-795
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 34
               

               Conread position:
               70-342
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               127, 12
               

               Conread position:
               71-368
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               71-523
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 9
               

               Conread position:
               72-524
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               319
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               96, 30
               

               Conread position:
               72-548
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               72-772
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               450
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               7, 161
               

               Conread position:
               75-799
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               89-488
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               213, 54
               

               Conread position:
               93-792
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               126-492
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 257
               

               Conread position:
               133-753
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 27
               

               Conread position:
               137-543
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               23, 239
               

               Conread position:
               137-690
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               356
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               16, 202
               

               Conread position:
               160-790
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               395
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               115, 234
               

               Conread position:
               161-413
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               161-792
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 58
               

               Conread position:
               164-797
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               165-441
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               102, 187
               

               Conread position:
               165-570
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               119, 36
               

               Conread position:
               167-791
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               397
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               103, 73
               

               Conread position:
               205-756
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               356
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               99, 77
               

               Conread position:
               215-464
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 160
               

               Conread position:
               246-761
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               326
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               250-526
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               150, 134
               

               Conread position:
               265-563
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 127
               

               Conread position:
               265-760
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               308
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               267-802
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 120
               

               Conread position:
               273-592
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 62
               

               Conread position:
               275-759
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 101
               

               Conread position:
               302-572
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               177, 77
               

               Conread position:
               302-625
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               178, 119
               

               Conread position:
               308-555
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               320-587
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               160, 59
               

               Conread position:
               324-801
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 55
               
Show alignments to all cow chromosomes.