Cow genome map
| Conread name: | Thy1-THY010090H02 |
| Conread position: | 36-505 |
| Cow position: | chr7:66273954-66273479 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 317 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 61-732 |
| Cow position: | chr7:23478337-23477679 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 418 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 62-738 |
| Cow position: | chr7:55964582-55965245 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 37 |
| Conread position: | 62-792 |
| Cow position: | chr7:55634913-55634196 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 40 |
| Conread position: | 68-795 |
| Cow position: | chr7:61434242-61434958 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 70-342 |
| Cow position: | chr7:54294810-54295091 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 127, 12 |
| Conread position: | 71-368 |
| Cow position: | chr7:59086120-59086430 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 71-523 |
| Cow position: | chr7:67631278-67630819 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 72-524 |
| Cow position: | chr7:40125818-40126269 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 96, 30 |
| Conread position: | 72-548 |
| Cow position: | chr7:24534041-24534526 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 30 |
| Conread position: | 72-772 |
| Cow position: | chr7:34832209-34832913 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 450 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 7, 161 |
| Conread position: | 75-799 |
| Cow position: | chr7:42505235-42505950 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 89-488 |
| Cow position: | chr7:56680409-56680021 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 213, 54 |
| Conread position: | 93-792 |
| Cow position: | chr7:4152522-4151843 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 126-492 |
| Cow position: | chr7:31526170-31525802 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 257 |
| Conread position: | 133-753 |
| Cow position: | chr7:6172777-6173379 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 27 |
| Conread position: | 137-543 |
| Cow position: | chr7:12657988-12658397 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 239 |
| Conread position: | 137-690 |
| Cow position: | chr7:23239649-23240191 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 356 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 16, 202 |
| Conread position: | 160-790 |
| Cow position: | chr7:68547900-68548535 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 395 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 115, 234 |
| Conread position: | 161-413 |
| Cow position: | chr7:752424-752177 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 161-792 |
| Cow position: | chr7:31438159-31438791 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 164-797 |
| Cow position: | chr7:21914478-21915083 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 165-441 |
| Cow position: | chr7:5531022-5531295 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 102, 187 |
| Conread position: | 165-570 |
| Cow position: | chr7:33963086-33962681 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 36 |
| Conread position: | 167-791 |
| Cow position: | chr7:28536029-28536635 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 397 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 103, 73 |
| Conread position: | 205-756 |
| Cow position: | chr7:43208568-43208032 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 356 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 99, 77 |
| Conread position: | 215-464 |
| Cow position: | chr7:12317667-12317425 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 160 |
| Conread position: | 246-761 |
| Cow position: | chr7:62792921-62793435 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 326 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 250-526 |
| Cow position: | chr7:3242940-3242670 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 150, 134 |
| Conread position: | 265-563 |
| Cow position: | chr7:64355416-64355711 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 127 |
| Conread position: | 265-760 |
| Cow position: | chr7:68928686-68929171 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 308 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 34, 143 |
| Conread position: | 267-802 |
| Cow position: | chr7:29744007-29743477 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 273-592 |
| Cow position: | chr7:39095116-39094803 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 62 |
| Conread position: | 275-759 |
| Cow position: | chr7:35061161-35061639 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 101 |
| Conread position: | 302-572 |
| Cow position: | chr7:28162510-28162775 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 177, 77 |
| Conread position: | 302-625 |
| Cow position: | chr7:66012032-66012354 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 178, 119 |
| Conread position: | 308-555 |
| Cow position: | chr7:47166380-47166611 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 320-587 |
| Cow position: | chr7:11640524-11640779 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 160, 59 |
| Conread position: | 324-801 |
| Cow position: | chr7:54895751-54895293 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 55 |
Show alignments to all cow chromosomes.