Cow genome map
| Conread name: | Thy1-THY010090H02 |
| Conread position: | 51-567 |
| Cow position: | chr8:54381405-54380886 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 343 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 86, 227 |
| Conread position: | 59-355 |
| Cow position: | chr8:11795292-11795595 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 108, 37 |
| Conread position: | 62-260 |
| Cow position: | chr8:8102941-8102735 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 166 |
| Conread position: | 62-358 |
| Cow position: | chr8:45566933-45566631 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 62-771 |
| Cow position: | chr8:8224999-8224274 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 448 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 63, 96 |
| Conread position: | 62-802 |
| Cow position: | chr8:30031896-30031175 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 455 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 168, 40 |
| Conread position: | 71-467 |
| Cow position: | chr8:34270980-34271369 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 109, 37 |
| Conread position: | 71-487 |
| Cow position: | chr8:5473832-5474253 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 71-764 |
| Cow position: | chr8:8871998-8871309 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 72-565 |
| Cow position: | chr8:12454574-12455067 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 30 |
| Conread position: | 80-663 |
| Cow position: | chr8:11300806-11301392 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 84-573 |
| Cow position: | chr8:39048938-39048435 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 330 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 87-679 |
| Cow position: | chr8:30346491-30347086 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 250 |
| Conread position: | 97-802 |
| Cow position: | chr8:6377476-6376782 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 5 |
| Conread position: | 98-575 |
| Cow position: | chr8:40108580-40109056 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 79, 168 |
| Conread position: | 102-772 |
| Cow position: | chr8:58881653-58881007 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 416 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 168, 69 |
| Conread position: | 103-467 |
| Cow position: | chr8:22380412-22380051 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 140 |
| Conread position: | 137-660 |
| Cow position: | chr8:50974064-50973561 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 28 |
| Conread position: | 144-410 |
| Cow position: | chr8:45445417-45445687 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 237 |
| Conread position: | 153-456 |
| Cow position: | chr8:55737643-55737342 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 160-539 |
| Cow position: | chr8:46529954-46530340 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 141, 79 |
| Conread position: | 161-536 |
| Cow position: | chr8:21343195-21343571 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 161-748 |
| Cow position: | chr8:1498678-1499246 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 378 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 112, 221 |
| Conread position: | 161-796 |
| Cow position: | chr8:39461097-39461717 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 87 |
| Conread position: | 161-801 |
| Cow position: | chr8:5663993-5663378 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 18 |
| Conread position: | 163-571 |
| Cow position: | chr8:10465492-10465906 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 182-496 |
| Cow position: | chr8:78392-78085 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 108, 95 |
| Conread position: | 188-799 |
| Cow position: | chr8:45072123-45072711 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 56 |
| Conread position: | 209-799 |
| Cow position: | chr8:26886031-26886613 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 142 |
| Conread position: | 210-380 |
| Cow position: | chr8:46979444-46979270 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 130 |
| Conread position: | 210-549 |
| Cow position: | chr8:6491957-6491619 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 91, 52 |
| Conread position: | 224-451 |
| Cow position: | chr8:19714119-19714345 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 164 |
| Conread position: | 240-802 |
| Cow position: | chr8:24671821-24671265 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 252-738 |
| Cow position: | chr8:22030679-22031164 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 133 |
| Conread position: | 252-759 |
| Cow position: | chr8:11118392-11117885 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 129 |
| Conread position: | 267-760 |
| Cow position: | chr8:53450626-53451119 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 117 |
| Conread position: | 281-799 |
| Cow position: | chr8:37552604-37552093 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 332 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 296-756 |
| Cow position: | chr8:46480712-46480244 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 215 |
| Conread position: | 300-595 |
| Cow position: | chr8:34172809-34172526 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 188, 82 |
| Conread position: | 302-747 |
| Cow position: | chr8:8914346-8914784 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 180, 74 |
| Conread position: | 302-773 |
| Cow position: | chr8:22153863-22153409 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 173, 73 |
| Conread position: | 310-768 |
| Cow position: | chr8:16685486-16685041 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 78 |
| Conread position: | 317-715 |
| Cow position: | chr8:1618581-1618179 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 272 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 62, 108 |
| Conread position: | 324-773 |
| Cow position: | chr8:26496393-26495955 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 58 |
Show alignments to all cow chromosomes.