Cow genome map
| Conread name: | Thy1-THY010098B08 |
| Conread position: | 1-913 |
| Cow position: | chr10:9608431-9609369 (view UCSC Genome Browser custom track) |
| Alignm length: | 969 |
| Alignm identity: | 613 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 28 |
| Conread position: | 85-546 |
| Cow position: | chr10:2611427-2610949 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 320 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 21, 129 |
| Conread position: | 99-581 |
| Cow position: | chr10:59347499-59346997 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 119-700 |
| Cow position: | chr10:33902555-33903148 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 392 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 125-697 |
| Cow position: | chr10:21449383-21449981 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 375 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 105, 193 |
| Conread position: | 126-653 |
| Cow position: | chr10:24099334-24099877 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 112 |
| Conread position: | 127-524 |
| Cow position: | chr10:58265058-58265466 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 38 |
| Conread position: | 127-697 |
| Cow position: | chr10:11111063-11110487 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 364 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 104, 118 |
| Conread position: | 127-697 |
| Cow position: | chr10:21736863-21737458 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 368 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-697 |
| Cow position: | chr10:32365754-32365157 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 377 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-697 |
| Cow position: | chr10:55286758-55286163 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 364 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 107, 169 |
| Conread position: | 127-697 |
| Cow position: | chr10:55975356-55974755 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 375 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 164 |
| Conread position: | 127-697 |
| Cow position: | chr10:64304225-64304808 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 375 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 103, 128 |
| Conread position: | 127-697 |
| Cow position: | chr10:66495587-66496184 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 381 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-700 |
| Cow position: | chr10:17868457-17869035 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 379 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 84, 25 |
| Conread position: | 127-701 |
| Cow position: | chr10:42636477-42635905 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 361 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 113 |
| Conread position: | 127-716 |
| Cow position: | chr10:44113485-44114101 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 394 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-716 |
| Cow position: | chr10:50192589-50192003 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 393 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 127-912 |
| Cow position: | chr10:6222060-6221253 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 511 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-912 |
| Cow position: | chr10:21728886-21729695 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 507 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-912 |
| Cow position: | chr10:37138489-37139296 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 509 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 130-694 |
| Cow position: | chr10:7851947-7851371 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 395 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 51, 56 |
| Conread position: | 130-697 |
| Cow position: | chr10:49504745-49504151 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 346 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 130-859 |
| Cow position: | chr10:45309426-45310142 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 11 |
| Conread position: | 131-416 |
| Cow position: | chr10:53326339-53326629 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 132-702 |
| Cow position: | chr10:20201652-20202228 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 377 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 145, 93 |
| Conread position: | 135-758 |
| Cow position: | chr10:8518137-8518749 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 106 |
| Conread position: | 141-455 |
| Cow position: | chr10:52278214-52277890 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 127 |
| Conread position: | 141-697 |
| Cow position: | chr10:35353275-35353852 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 384 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 90, 145 |
| Conread position: | 141-816 |
| Cow position: | chr10:14807737-14807047 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 445 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 141-870 |
| Cow position: | chr10:15758795-15758056 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 107 |
| Conread position: | 141-921 |
| Cow position: | chr10:4120397-4119617 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 509 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 55, 134 |
| Conread position: | 141-921 |
| Cow position: | chr10:26291686-26292489 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 507 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 90, 182 |
| Conread position: | 184-548 |
| Cow position: | chr10:9626716-9627087 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 32, 48 |
| Conread position: | 185-715 |
| Cow position: | chr10:54891352-54891879 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 204-681 |
| Cow position: | chr10:23350672-23351156 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 207-697 |
| Cow position: | chr10:10173637-10173120 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 334 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 208-652 |
| Cow position: | chr10:752679-753130 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 117 |
| Conread position: | 213-861 |
| Cow position: | chr10:57743919-57743273 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 426 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 213-921 |
| Cow position: | chr10:62587503-62586775 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 218-654 |
| Cow position: | chr10:42475891-42476322 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 110 |
| Conread position: | 221-690 |
| Cow position: | chr10:17128397-17127940 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 229-554 |
| Cow position: | chr10:3114668-3114325 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 238-697 |
| Cow position: | chr10:11623026-11623508 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 315 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 243-914 |
| Cow position: | chr10:60703348-60704022 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 438 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 244-691 |
| Cow position: | chr10:24935861-24936328 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 309 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 337-903 |
| Cow position: | chr10:41455488-41454929 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 377 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 108, 33 |
| Conread position: | 353-716 |
| Cow position: | chr10:63849873-63849517 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 362-571 |
| Cow position: | chr10:47553435-47553653 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 57 |
| Conread position: | 378-715 |
| Cow position: | chr10:22268676-22269021 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 402-724 |
| Cow position: | chr10:483663-484005 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 450-887 |
| Cow position: | chr10:37309604-37309174 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 9, 191 |
| Conread position: | 478-921 |
| Cow position: | chr10:24737267-24737700 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 492-715 |
| Cow position: | chr10:59543372-59543147 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 517-870 |
| Cow position: | chr10:17151215-17150881 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 44 |
Show alignments to all cow chromosomes.