Cow genome map


           Conread name:
           Thy1-THY010098B08
        

               Conread position:
               1-913
               

               Cow position:
               
               

               Alignm length:
               969
               

               Alignm identity:
               613
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               85-546
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               320
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               21, 129
               

               Conread position:
               99-581
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               119-700
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               392
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               125-697
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               375
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               105, 193
               

               Conread position:
               126-653
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 112
               

               Conread position:
               127-524
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 38
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               364
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               104, 118
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               368
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               377
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               364
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               107, 169
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               375
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 164
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               375
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               103, 128
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               381
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-700
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               379
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               84, 25
               

               Conread position:
               127-701
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               361
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               104, 113
               

               Conread position:
               127-716
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               394
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-716
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               393
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               105, 65
               

               Conread position:
               127-912
               

               Cow position:
               
               

               Alignm length:
               826
               

               Alignm identity:
               511
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-912
               

               Cow position:
               
               

               Alignm length:
               826
               

               Alignm identity:
               507
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-912
               

               Cow position:
               
               

               Alignm length:
               826
               

               Alignm identity:
               509
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               130-694
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               395
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               51, 56
               

               Conread position:
               130-697
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               346
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               130-859
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 11
               

               Conread position:
               131-416
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               132-702
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               377
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               145, 93
               

               Conread position:
               135-758
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 106
               

               Conread position:
               141-455
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               90, 127
               

               Conread position:
               141-697
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               384
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               90, 145
               

               Conread position:
               141-816
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               445
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               90, 146
               

               Conread position:
               141-870
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 107
               

               Conread position:
               141-921
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               509
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               141-921
               

               Cow position:
               
               

               Alignm length:
               823
               

               Alignm identity:
               507
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               90, 182
               

               Conread position:
               184-548
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               185-715
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               204-681
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               207-697
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               334
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               10, 80
               

               Conread position:
               208-652
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 117
               

               Conread position:
               213-861
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               426
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               213-921
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               218-654
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 110
               

               Conread position:
               221-690
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               229-554
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 87
               

               Conread position:
               238-697
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 71
               

               Conread position:
               243-914
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               438
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               244-691
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               309
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               337-903
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               377
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               108, 33
               

               Conread position:
               353-716
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               362-571
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               378-715
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               84, 55
               

               Conread position:
               402-724
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               51, 28
               

               Conread position:
               450-887
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               287
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               9, 191
               

               Conread position:
               478-921
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               17, 86
               

               Conread position:
               492-715
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               517-870
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 44
               
Show alignments to all cow chromosomes.