Cow genome map


           Conread name:
           Thy1-THY010098B08
        

               Conread position:
               2-572
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               362
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               69-770
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               94-697
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               399
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               49, 195
               

               Conread position:
               102-568
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               128, 166
               

               Conread position:
               105-697
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 228
               

               Conread position:
               114-700
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               385
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               118, 40
               

               Conread position:
               119-455
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               75, 67
               

               Conread position:
               119-710
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               383
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               112, 55
               

               Conread position:
               123-716
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               393
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               108, 164
               

               Conread position:
               126-580
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               295
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               91, 39
               

               Conread position:
               126-816
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 133
               

               Conread position:
               127-646
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               346
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               102, 84
               

               Conread position:
               127-654
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               356
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               152, 36
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               372
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               380
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               104, 196
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               379
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               380
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               384
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               381
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               378
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               151, 159
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               372
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               104, 86
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               381
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               377
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               353
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               104, 191
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               380
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               381
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               376
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-700
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               373
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               127-701
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               377
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-716
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               372
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-816
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 196
               

               Conread position:
               128-697
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               378
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               103, 197
               

               Conread position:
               128-897
               

               Cow position:
               
               

               Alignm length:
               812
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 148
               

               Conread position:
               131-686
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               367
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               90, 78
               

               Conread position:
               133-516
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               98, 55
               

               Conread position:
               135-708
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               379
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               96, 75
               

               Conread position:
               141-552
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               141-554
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               293
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               118, 185
               

               Conread position:
               141-697
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 72
               

               Conread position:
               141-912
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               500
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               90, 146
               

               Conread position:
               141-921
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 118
               

               Conread position:
               142-560
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 114
               

               Conread position:
               144-552
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               14, 6
               

               Conread position:
               146-708
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               382
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               162-511
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               165-551
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 134
               

               Conread position:
               167-576
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               300
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               27, 31
               

               Conread position:
               167-576
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               27, 31
               

               Conread position:
               170-472
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               170-697
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               361
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               61, 89
               

               Conread position:
               174-916
               

               Cow position:
               
               

               Alignm length:
               772
               

               Alignm identity:
               493
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               175-551
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               176-771
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               399
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               183-573
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 26
               

               Conread position:
               187-685
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               331
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               44, 98
               

               Conread position:
               195-686
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               333
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               35, 52
               

               Conread position:
               210-418
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 90
               

               Conread position:
               213-699
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               317
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               214-416
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               215-890
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 46
               

               Conread position:
               229-495
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               229-716
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               342
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               230-695
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 70
               

               Conread position:
               236-552
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               238-688
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               313
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               40, 82
               

               Conread position:
               238-717
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               320
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               98, 44
               

               Conread position:
               239-915
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               457
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               41, 71
               

               Conread position:
               240-547
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               242-624
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               245-697
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               302
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               33, 77
               

               Conread position:
               258-685
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               28, 64
               

               Conread position:
               266-921
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               433
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               347-905
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               376
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               33, 190
               

               Conread position:
               354-692
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               377-890
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               346
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               10, 163
               

               Conread position:
               382-582
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               387-708
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               64, 127
               

               Conread position:
               402-646
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               39, 127
               

               Conread position:
               430-900
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               321
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               27, 90
               

               Conread position:
               465-902
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               14, 19
               

               Conread position:
               470-686
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               5, 131
               

               Conread position:
               493-712
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               128, 6
               

               Conread position:
               497-920
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               82, 105
               

               Conread position:
               502-718
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               154, 87
               
Show alignments to all cow chromosomes.