Cow genome map
| Conread name: | Thy1-THY010098B08 |
| Conread position: | 126-921 |
| Cow position: | chr13:43117433-43118223 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 127-580 |
| Cow position: | chr13:36075734-36076205 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 127-697 |
| Cow position: | chr13:5498277-5498871 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 381 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 104, 159 |
| Conread position: | 127-697 |
| Cow position: | chr13:16808110-16807528 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 374 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 104, 129 |
| Conread position: | 127-715 |
| Cow position: | chr13:38625716-38625119 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 127-921 |
| Cow position: | chr13:60646057-60646873 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 196 |
| Conread position: | 135-705 |
| Cow position: | chr13:20538047-20538621 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 370 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 187 |
| Conread position: | 141-455 |
| Cow position: | chr13:11129739-11130058 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 43 |
| Conread position: | 141-494 |
| Cow position: | chr13:6602169-6601807 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 90, 125 |
| Conread position: | 141-795 |
| Cow position: | chr13:571339-570671 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 182 |
| Conread position: | 141-870 |
| Cow position: | chr13:56454714-56455445 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 59 |
| Conread position: | 163-766 |
| Cow position: | chr13:59654982-59654364 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 169-921 |
| Cow position: | chr13:17048771-17049521 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 66 |
| Conread position: | 170-553 |
| Cow position: | chr13:3184521-3184127 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 119, 42 |
| Conread position: | 178-914 |
| Cow position: | chr13:34094457-34095197 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 181-564 |
| Cow position: | chr13:13313062-13312662 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 183-715 |
| Cow position: | chr13:21723388-21722844 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 356 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 50, 75 |
| Conread position: | 197-921 |
| Cow position: | chr13:28341554-28342288 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 476 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 205-715 |
| Cow position: | chr13:20907500-20907004 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 334 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 26, 8 |
| Conread position: | 214-625 |
| Cow position: | chr13:45886045-45885649 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 215-696 |
| Cow position: | chr13:23151947-23151451 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 105 |
| Conread position: | 220-864 |
| Cow position: | chr13:19141951-19141312 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 405 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 229-695 |
| Cow position: | chr13:53182105-53182579 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 325 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 51, 302 |
| Conread position: | 229-697 |
| Cow position: | chr13:837982-838476 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 319 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 229-697 |
| Cow position: | chr13:52251322-52250850 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 297 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 229-781 |
| Cow position: | chr13:12906519-12905943 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 381 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 29 |
| Conread position: | 230-462 |
| Cow position: | chr13:831618-831855 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 105, 89 |
| Conread position: | 233-920 |
| Cow position: | chr13:30771106-30771786 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 436 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 62 |
| Conread position: | 238-701 |
| Cow position: | chr13:392755-393212 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 305 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 250-570 |
| Cow position: | chr13:48253014-48253359 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 216 |
| Conread position: | 250-921 |
| Cow position: | chr13:26587704-26588384 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 121 |
| Conread position: | 252-784 |
| Cow position: | chr13:25884088-25883537 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 360 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 27, 313 |
| Conread position: | 257-716 |
| Cow position: | chr13:33584339-33583874 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 321 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 260-816 |
| Cow position: | chr13:34016712-34017279 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 369 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 265-921 |
| Cow position: | chr13:44426416-44427081 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 442 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 279-616 |
| Cow position: | chr13:49255944-49255608 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 100 |
| Conread position: | 279-902 |
| Cow position: | chr13:34793109-34792506 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 416 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 72, 57 |
| Conread position: | 279-921 |
| Cow position: | chr13:47570445-47569801 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 414 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 29 |
| Conread position: | 281-554 |
| Cow position: | chr13:44645350-44645631 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 8, 42 |
| Conread position: | 287-917 |
| Cow position: | chr13:42002929-42002286 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 417 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 377-870 |
| Cow position: | chr13:6530626-6530138 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 329 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 80, 107 |
| Conread position: | 739-921 |
| Cow position: | chr13:24289459-24289643 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 39 |
Show alignments to all cow chromosomes.