Cow genome map
| Conread name: | Thy1-THY010098B08 |
| Conread position: | 98-814 |
| Cow position: | chr18:3229622-3228892 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 228 |
| Conread position: | 126-697 |
| Cow position: | chr18:24037013-24037606 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 372 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 105, 183 |
| Conread position: | 127-548 |
| Cow position: | chr18:24587080-24587510 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 280 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 30, 199 |
| Conread position: | 127-697 |
| Cow position: | chr18:13270739-13270150 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 375 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-697 |
| Cow position: | chr18:17334909-17335495 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 361 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 46 |
| Conread position: | 127-697 |
| Cow position: | chr18:29072254-29071661 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 375 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 104, 196 |
| Conread position: | 127-921 |
| Cow position: | chr18:602629-603443 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 509 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 104, 48 |
| Conread position: | 127-921 |
| Cow position: | chr18:50092611-50093422 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 508 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 104, 95 |
| Conread position: | 127-921 |
| Cow position: | chr18:52629421-52630236 (view UCSC Genome Browser custom track) |
| Alignm length: | 835 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 128-697 |
| Cow position: | chr18:18215186-18215773 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 371 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 103, 159 |
| Conread position: | 128-913 |
| Cow position: | chr18:51247486-51246693 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 31 |
| Conread position: | 131-486 |
| Cow position: | chr18:45663420-45663057 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 100, 28 |
| Conread position: | 131-539 |
| Cow position: | chr18:183612-183177 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 402 |
| Conread position: | 134-870 |
| Cow position: | chr18:34210391-34211129 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 91 |
| Conread position: | 141-581 |
| Cow position: | chr18:54059026-54059481 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 182 |
| Conread position: | 141-660 |
| Cow position: | chr18:37406375-37406891 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 348 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 90, 47 |
| Conread position: | 141-697 |
| Cow position: | chr18:19356330-19355753 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 363 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 141-784 |
| Cow position: | chr18:25200565-25199922 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 415 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 147-579 |
| Cow position: | chr18:21236614-21237058 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 298 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 84, 108 |
| Conread position: | 151-419 |
| Cow position: | chr18:54274726-54274468 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 163-533 |
| Cow position: | chr18:10411402-10411787 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 177-921 |
| Cow position: | chr18:21455858-21455099 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 25 |
| Conread position: | 178-538 |
| Cow position: | chr18:10802115-10802475 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 60, 49 |
| Conread position: | 197-691 |
| Cow position: | chr18:41958285-41957762 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 340 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 199-529 |
| Cow position: | chr18:18382086-18382422 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 206-492 |
| Cow position: | chr18:42239981-42239680 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 82 |
| Conread position: | 213-492 |
| Cow position: | chr18:41498609-41498320 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 213-684 |
| Cow position: | chr18:37678447-37677954 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 133 |
| Conread position: | 222-525 |
| Cow position: | chr18:34820896-34820576 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 81 |
| Conread position: | 223-626 |
| Cow position: | chr18:23880109-23879684 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 237-703 |
| Cow position: | chr18:51309623-51309137 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 118, 106 |
| Conread position: | 245-566 |
| Cow position: | chr18:11732114-11731795 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 249-574 |
| Cow position: | chr18:35883711-35884044 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 28, 82 |
| Conread position: | 254-629 |
| Cow position: | chr18:8685233-8684830 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 294 |
| Conread position: | 277-700 |
| Cow position: | chr18:35852903-35853344 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 291-704 |
| Cow position: | chr18:4540363-4540788 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 310-581 |
| Cow position: | chr18:44541372-44541652 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 362-785 |
| Cow position: | chr18:7388011-7388456 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 390 |
| Conread position: | 377-693 |
| Cow position: | chr18:252553-252221 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 78, 176 |
| Conread position: | 394-862 |
| Cow position: | chr18:31382595-31382132 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 104 |
| Conread position: | 409-626 |
| Cow position: | chr18:43895664-43895434 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 47, 139 |
| Conread position: | 450-716 |
| Cow position: | chr18:33347580-33347311 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 470-816 |
| Cow position: | chr18:35796888-35797243 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 5, 81 |
Show alignments to all cow chromosomes.