Cow genome map
| Conread name: | Thy1-THY010098B08 |
| Conread position: | 106-844 |
| Cow position: | chr19:15060222-15060947 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 463 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 98, 72 |
| Conread position: | 118-481 |
| Cow position: | chr19:38439612-38439251 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 160, 23 |
| Conread position: | 127-570 |
| Cow position: | chr19:41213701-41214155 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 51 |
| Conread position: | 127-695 |
| Cow position: | chr19:33625410-33624827 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 380 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 45, 41 |
| Conread position: | 127-697 |
| Cow position: | chr19:9704349-9704940 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 373 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 105, 133 |
| Conread position: | 127-697 |
| Cow position: | chr19:10196251-10195659 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 383 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 11, 15 |
| Conread position: | 127-697 |
| Cow position: | chr19:10614068-10613474 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 385 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 104, 131 |
| Conread position: | 127-697 |
| Cow position: | chr19:40848647-40849243 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 376 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 104, 146 |
| Conread position: | 127-705 |
| Cow position: | chr19:36037479-36036895 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 123 |
| Conread position: | 128-443 |
| Cow position: | chr19:39884222-39884553 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 128-545 |
| Cow position: | chr19:35835428-35835011 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 331, 62 |
| Conread position: | 128-870 |
| Cow position: | chr19:22860006-22860779 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 23 |
| Conread position: | 131-685 |
| Cow position: | chr19:55366976-55367560 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 373 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 64, 89 |
| Conread position: | 131-696 |
| Cow position: | chr19:38846750-38847307 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 361 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 146, 79 |
| Conread position: | 131-870 |
| Cow position: | chr19:9114882-9115637 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 111 |
| Conread position: | 134-620 |
| Cow position: | chr19:49401805-49401318 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 330 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 135-702 |
| Cow position: | chr19:41851663-41852251 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 379 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 100, 69 |
| Conread position: | 137-467 |
| Cow position: | chr19:3584366-3584707 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 139 |
| Conread position: | 141-546 |
| Cow position: | chr19:14581111-14580682 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 183 |
| Conread position: | 141-716 |
| Cow position: | chr19:42165-41560 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 377 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 90, 148 |
| Conread position: | 142-584 |
| Cow position: | chr19:29627876-29628323 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 170 |
| Conread position: | 145-716 |
| Cow position: | chr19:35982577-35981998 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 368 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 134, 80 |
| Conread position: | 149-459 |
| Cow position: | chr19:3410236-3410561 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 167-422 |
| Cow position: | chr19:23770559-23770822 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 167-691 |
| Cow position: | chr19:6614875-6614331 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 348 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 176-717 |
| Cow position: | chr19:1579546-1580109 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 62 |
| Conread position: | 183-625 |
| Cow position: | chr19:28980247-28979796 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 137 |
| Conread position: | 184-437 |
| Cow position: | chr19:2481053-2481320 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 193-652 |
| Cow position: | chr19:42779353-42778878 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 210-538 |
| Cow position: | chr19:41166925-41166579 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 79 |
| Conread position: | 211-717 |
| Cow position: | chr19:41786067-41786571 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 60 |
| Conread position: | 213-679 |
| Cow position: | chr19:19462278-19461795 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 311 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 215-479 |
| Cow position: | chr19:30565301-30565022 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 221-716 |
| Cow position: | chr19:23257217-23256697 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 344 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 10, 100 |
| Conread position: | 233-551 |
| Cow position: | chr19:25555927-25556261 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 252-464 |
| Cow position: | chr19:39794175-39793948 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 279-626 |
| Cow position: | chr19:5940090-5940433 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 74, 29 |
| Conread position: | 285-715 |
| Cow position: | chr19:17732292-17731856 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 296 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 68, 57 |
| Conread position: | 347-782 |
| Cow position: | chr19:13456980-13457421 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 293 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 5, 46 |
| Conread position: | 353-577 |
| Cow position: | chr19:44609217-44608990 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 110, 23 |
| Conread position: | 357-643 |
| Cow position: | chr19:25018854-25019144 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 357-716 |
| Cow position: | chr19:24671899-24672267 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 28 |
| Conread position: | 379-715 |
| Cow position: | chr19:47127008-47126671 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 386-921 |
| Cow position: | chr19:17804261-17803728 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 356 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 148, 23 |
| Conread position: | 400-900 |
| Cow position: | chr19:2701020-2701534 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 48 |
Show alignments to all cow chromosomes.