Cow genome map


           Conread name:
           Thy1-THY010098B08
        

               Conread position:
               89-551
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               315
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               49, 41
               

               Conread position:
               89-921
               

               Cow position:
               
               

               Alignm length:
               852
               

               Alignm identity:
               672
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 457
               

               Conread position:
               99-442
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               135, 68
               

               Conread position:
               102-709
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               122-697
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               378
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               109, 165
               

               Conread position:
               122-912
               

               Cow position:
               
               

               Alignm length:
               832
               

               Alignm identity:
               515
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               109, 165
               

               Conread position:
               126-623
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               324
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               105, 64
               

               Conread position:
               127-455
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               104, 134
               

               Conread position:
               127-457
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 213
               

               Conread position:
               127-546
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               104, 84
               

               Conread position:
               127-554
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 135
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               373
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               379
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               104, 48
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               374
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               87, 129
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               379
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               105, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               382
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               359
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               106, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               386
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               105, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               372
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               105, 82
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               385
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               33, 163
               

               Conread position:
               127-701
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               376
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               104, 145
               

               Conread position:
               127-702
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               378
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               104, 68
               

               Conread position:
               127-704
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               390
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               86, 103
               

               Conread position:
               127-718
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               379
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               152, 104
               

               Conread position:
               127-843
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 59
               

               Conread position:
               127-912
               

               Cow position:
               
               

               Alignm length:
               825
               

               Alignm identity:
               510
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-914
               

               Cow position:
               
               

               Alignm length:
               827
               

               Alignm identity:
               510
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-921
               

               Cow position:
               
               

               Alignm length:
               828
               

               Alignm identity:
               512
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-921
               

               Cow position:
               
               

               Alignm length:
               832
               

               Alignm identity:
               517
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               128-465
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               93, 117
               

               Conread position:
               128-564
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 65
               

               Conread position:
               128-699
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               376
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               103, 159
               

               Conread position:
               128-921
               

               Cow position:
               
               

               Alignm length:
               842
               

               Alignm identity:
               528
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               58, 109
               

               Conread position:
               131-618
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               340
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               80, 168
               

               Conread position:
               131-697
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               365
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               100, 187
               

               Conread position:
               134-411
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               91, 170
               

               Conread position:
               136-482
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 125
               

               Conread position:
               141-421
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 183
               

               Conread position:
               141-557
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 54
               

               Conread position:
               141-697
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               363
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               92, 182
               

               Conread position:
               146-818
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 176
               

               Conread position:
               159-494
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 163
               

               Conread position:
               160-556
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 100
               

               Conread position:
               162-517
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               173, 42
               

               Conread position:
               170-552
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               34, 61
               

               Conread position:
               170-554
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               61, 142
               

               Conread position:
               192-618
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               47, 101
               

               Conread position:
               219-581
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               229-452
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               234-714
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 68
               

               Conread position:
               238-870
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               429
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               36, 86
               

               Conread position:
               244-465
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               248-825
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               250-720
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               325
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               161, 33
               

               Conread position:
               253-715
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               263-690
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               278-817
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               376
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               280-715
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 36
               

               Conread position:
               298-843
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               374
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               347-654
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 201
               

               Conread position:
               376-702
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               85, 120
               

               Conread position:
               377-816
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               89, 74
               

               Conread position:
               378-678
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 170
               

               Conread position:
               379-626
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               204, 34
               

               Conread position:
               385-915
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 172
               

               Conread position:
               408-833
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 171
               

               Conread position:
               474-870
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               537-921
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 12
               
Show alignments to all cow chromosomes.