Cow genome map
| Conread name: | Thy1-THY010098B08 |
| Conread position: | 113-654 |
| Cow position: | chr21:4140715-4141255 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 372 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 50 |
| Conread position: | 118-551 |
| Cow position: | chr21:44823948-44824383 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 103, 92 |
| Conread position: | 122-697 |
| Cow position: | chr21:26875512-26874911 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 385 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 109, 201 |
| Conread position: | 127-551 |
| Cow position: | chr21:13190020-13189576 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 99, 63 |
| Conread position: | 127-697 |
| Cow position: | chr21:5021054-5020465 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-697 |
| Cow position: | chr21:13735246-13735840 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 377 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-697 |
| Cow position: | chr21:22719188-22719778 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 365 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 104, 42 |
| Conread position: | 127-697 |
| Cow position: | chr21:25598580-25597992 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 368 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-697 |
| Cow position: | chr21:27619604-27620181 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 373 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-783 |
| Cow position: | chr21:26506285-26505636 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 419 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 81, 87 |
| Conread position: | 127-916 |
| Cow position: | chr21:37924092-37923292 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 519 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 106, 160 |
| Conread position: | 131-645 |
| Cow position: | chr21:208172-207660 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 348 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 100, 54 |
| Conread position: | 131-674 |
| Cow position: | chr21:431575-432131 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 134-660 |
| Cow position: | chr21:6564810-6565328 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 73 |
| Conread position: | 136-700 |
| Cow position: | chr21:40618045-40618627 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 360 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 139-651 |
| Cow position: | chr21:10093708-10093173 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 141-697 |
| Cow position: | chr21:34899783-34900355 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 364 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 137, 33 |
| Conread position: | 141-697 |
| Cow position: | chr21:36376882-36376309 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 353 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 141-787 |
| Cow position: | chr21:29253315-29253963 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 419 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 90, 140 |
| Conread position: | 141-795 |
| Cow position: | chr21:15444153-15444802 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 425 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 107, 59 |
| Conread position: | 141-870 |
| Cow position: | chr21:4098461-4097735 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 445 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 141-921 |
| Cow position: | chr21:7047283-7048082 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 504 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 145-421 |
| Cow position: | chr21:21290586-21290860 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 114 |
| Conread position: | 146-627 |
| Cow position: | chr21:47970898-47971415 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 339 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 8, 187 |
| Conread position: | 149-467 |
| Cow position: | chr21:45003379-45003053 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 151-694 |
| Cow position: | chr21:1994939-1994390 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 353 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 78, 112 |
| Conread position: | 152-570 |
| Cow position: | chr21:15519976-15520412 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 38 |
| Conread position: | 175-645 |
| Cow position: | chr21:19127578-19127092 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 192-848 |
| Cow position: | chr21:30906946-30907611 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 435 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 208-713 |
| Cow position: | chr21:42454905-42454399 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 211-646 |
| Cow position: | chr21:26105090-26105536 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 219-716 |
| Cow position: | chr21:21668027-21667527 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 326 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 234-569 |
| Cow position: | chr21:46837542-46837865 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 239-700 |
| Cow position: | chr21:13300616-13300145 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 309 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 247-783 |
| Cow position: | chr21:45297150-45297697 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 366 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 247-870 |
| Cow position: | chr21:40083324-40082694 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 412 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 6, 74 |
| Conread position: | 252-708 |
| Cow position: | chr21:9934074-9933633 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 313 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 268-697 |
| Cow position: | chr21:38865838-38866293 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 279-618 |
| Cow position: | chr21:2460596-2460242 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 261 |
| Conread position: | 281-711 |
| Cow position: | chr21:48034579-48035013 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 374-713 |
| Cow position: | chr21:24055194-24055546 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 87, 236 |
| Conread position: | 377-654 |
| Cow position: | chr21:38804161-38804443 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 402-914 |
| Cow position: | chr21:24869186-24868666 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 343 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 121 |
| Conread position: | 440-870 |
| Cow position: | chr21:30873334-30872901 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 467-875 |
| Cow position: | chr21:11217831-11218217 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 59 |
Show alignments to all cow chromosomes.