Cow genome map
| Conread name: | Thy1-THY010098B08 |
| Conread position: | 119-691 |
| Cow position: | chr22:13210123-13209534 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 371 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 112, 140 |
| Conread position: | 122-697 |
| Cow position: | chr22:25336899-25336297 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 377 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 109, 165 |
| Conread position: | 123-573 |
| Cow position: | chr22:23716053-23716496 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 304 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 106, 203 |
| Conread position: | 125-774 |
| Cow position: | chr22:44654263-44653597 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 436 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 95, 63 |
| Conread position: | 127-554 |
| Cow position: | chr22:10161475-10161024 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 195 |
| Conread position: | 127-613 |
| Cow position: | chr22:23010510-23011023 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 337 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 135 |
| Conread position: | 127-622 |
| Cow position: | chr22:37996577-37997061 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 14 |
| Conread position: | 127-644 |
| Cow position: | chr22:6678000-6678525 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 346 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 104, 196 |
| Conread position: | 127-654 |
| Cow position: | chr22:15656107-15656647 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 340 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 23 |
| Conread position: | 127-661 |
| Cow position: | chr22:39133605-39133056 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 352 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 127-697 |
| Cow position: | chr22:3274616-3275211 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 379 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 85 |
| Conread position: | 127-715 |
| Cow position: | chr22:29885408-29886002 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 61 |
| Conread position: | 127-716 |
| Cow position: | chr22:20236831-20237447 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 383 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-859 |
| Cow position: | chr22:10550618-10549859 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 451 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 78, 169 |
| Conread position: | 127-890 |
| Cow position: | chr22:44924601-44925368 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 485 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 38 |
| Conread position: | 127-912 |
| Cow position: | chr22:22107785-22106979 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 508 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-921 |
| Cow position: | chr22:30674994-30675800 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 503 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-921 |
| Cow position: | chr22:31111146-31110344 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 195 |
| Conread position: | 128-414 |
| Cow position: | chr22:23951145-23951436 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 12 |
| Conread position: | 128-479 |
| Cow position: | chr22:42976461-42976102 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 23 |
| Conread position: | 128-652 |
| Cow position: | chr22:25842473-25843016 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 39 |
| Conread position: | 130-689 |
| Cow position: | chr22:12631112-12631676 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 373 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 101, 61 |
| Conread position: | 135-708 |
| Cow position: | chr22:30755967-30755380 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 391 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 141-516 |
| Cow position: | chr22:36319981-36319599 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 194, 86 |
| Conread position: | 141-552 |
| Cow position: | chr22:41407743-41408166 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 89, 170 |
| Conread position: | 141-624 |
| Cow position: | chr22:38919804-38920288 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 306 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 90, 180 |
| Conread position: | 141-708 |
| Cow position: | chr22:9048318-9047758 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 374 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 67 |
| Conread position: | 142-702 |
| Cow position: | chr22:43261589-43261009 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 362 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 90, 167 |
| Conread position: | 144-543 |
| Cow position: | chr22:33798293-33798700 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 145-572 |
| Cow position: | chr22:29209081-29209505 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 285 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 191, 73 |
| Conread position: | 147-695 |
| Cow position: | chr22:33219890-33219340 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 362 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 243, 77 |
| Conread position: | 155-716 |
| Cow position: | chr22:9638522-9637960 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 367 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 171-716 |
| Cow position: | chr22:23206941-23207502 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 345 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 177-697 |
| Cow position: | chr22:25240839-25241380 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 345 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 192-921 |
| Cow position: | chr22:36365558-36364803 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 483 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 206-688 |
| Cow position: | chr22:23507230-23506771 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 211-581 |
| Cow position: | chr22:41157321-41157705 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 215-615 |
| Cow position: | chr22:42488753-42489158 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 286 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 221-514 |
| Cow position: | chr22:29883596-29883901 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 238-863 |
| Cow position: | chr22:12094775-12095394 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 410 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 239-697 |
| Cow position: | chr22:8881763-8881292 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 244-697 |
| Cow position: | chr22:25968050-25968514 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 301 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 290 |
| Conread position: | 249-532 |
| Cow position: | chr22:37726801-37726501 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 260-560 |
| Cow position: | chr22:34901473-34901152 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 271-577 |
| Cow position: | chr22:9462781-9462453 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 276-715 |
| Cow position: | chr22:44389369-44388918 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 278-582 |
| Cow position: | chr22:26705147-26704840 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 56 |
| Conread position: | 280-870 |
| Cow position: | chr22:31154844-31155457 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 406 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 308-623 |
| Cow position: | chr22:46859341-46859017 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 313-697 |
| Cow position: | chr22:52069-51658 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 9, 121 |
| Conread position: | 401-870 |
| Cow position: | chr22:6420179-6420646 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 71, 100 |
| Conread position: | 490-709 |
| Cow position: | chr22:11353745-11353975 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 491-709 |
| Cow position: | chr22:31353705-31353930 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 25 |
Show alignments to all cow chromosomes.