Cow genome map
| Conread name: | Thy1-THY010098B08 |
| Conread position: | 91-552 |
| Cow position: | chr29:2409998-2410474 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 188, 40 |
| Conread position: | 94-708 |
| Cow position: | chr29:45467163-45467813 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 19 |
| Conread position: | 127-421 |
| Cow position: | chr29:20493806-20493502 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 86 |
| Conread position: | 127-697 |
| Cow position: | chr29:727483-726886 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 378 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-697 |
| Cow position: | chr29:7427387-7427985 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 196 |
| Conread position: | 127-697 |
| Cow position: | chr29:32543892-32543295 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 378 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 104, 165 |
| Conread position: | 127-697 |
| Cow position: | chr29:32555993-32556587 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 373 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 104, 134 |
| Conread position: | 127-697 |
| Cow position: | chr29:42255225-42255821 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 378 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 106, 160 |
| Conread position: | 127-716 |
| Cow position: | chr29:24982817-24983429 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 389 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-870 |
| Cow position: | chr29:5311004-5311744 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 183 |
| Conread position: | 127-912 |
| Cow position: | chr29:21474903-21474096 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 515 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 128-912 |
| Cow position: | chr29:21227728-21226924 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 513 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 103, 159 |
| Conread position: | 128-917 |
| Cow position: | chr29:28656621-28657426 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 501 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 103, 58 |
| Conread position: | 130-697 |
| Cow position: | chr29:4490237-4489661 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 374 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 101, 35 |
| Conread position: | 131-488 |
| Cow position: | chr29:19394922-19394553 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 80, 50 |
| Conread position: | 133-921 |
| Cow position: | chr29:30432450-30433255 (view UCSC Genome Browser custom track) |
| Alignm length: | 829 |
| Alignm identity: | 512 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 134-714 |
| Cow position: | chr29:19529249-19529829 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 398 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 141-514 |
| Cow position: | chr29:27309946-27310330 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 90, 180 |
| Conread position: | 141-547 |
| Cow position: | chr29:2298597-2299007 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 90, 61 |
| Conread position: | 141-696 |
| Cow position: | chr29:36323768-36323183 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 375 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 119 |
| Conread position: | 141-697 |
| Cow position: | chr29:16185039-16185622 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 374 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 143-568 |
| Cow position: | chr29:3692140-3691739 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 88, 147 |
| Conread position: | 153-572 |
| Cow position: | chr29:36733583-36733168 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 68, 102 |
| Conread position: | 164-697 |
| Cow position: | chr29:32808074-32807525 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 351 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 114, 67 |
| Conread position: | 168-715 |
| Cow position: | chr29:7801584-7802161 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 382 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 23, 143 |
| Conread position: | 184-713 |
| Cow position: | chr29:39326347-39325814 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 357 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 210-702 |
| Cow position: | chr29:5506846-5507334 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 211-655 |
| Cow position: | chr29:14388908-14389381 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 8 |
| Conread position: | 243-624 |
| Cow position: | chr29:13672389-13672006 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 48 |
| Conread position: | 245-912 |
| Cow position: | chr29:4164323-4163635 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 439 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 251-687 |
| Cow position: | chr29:23005037-23004606 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 260-697 |
| Cow position: | chr29:35265537-35265074 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 266-514 |
| Cow position: | chr29:34390519-34390775 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 266-772 |
| Cow position: | chr29:36614730-36615246 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 341 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 296-701 |
| Cow position: | chr29:22634476-22634046 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 281 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 57, 46 |
| Conread position: | 386-715 |
| Cow position: | chr29:12958650-12958325 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 457-715 |
| Cow position: | chr29:28664061-28663792 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 154 |
| Conread position: | 509-903 |
| Cow position: | chr29:24333784-24333377 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 42 |
Show alignments to all cow chromosomes.