Cow genome map

Conread name: Thy1-THY010098B08

Conread position: 70-814
Cow position: chr3:15308043-15307315 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 258

Conread position: 96-697
Cow position: chr3:56153981-56153370 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 395
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 183, 58

Conread position: 119-697
Cow position: chr3:64024365-64024961 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 380
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 94

Conread position: 127-546
Cow position: chr3:69951365-69950935 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 278
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 151, 113

Conread position: 127-554
Cow position: chr3:66029049-66028612 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 198

Conread position: 127-611
Cow position: chr3:61955768-61955260 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 330
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 39, 90

Conread position: 127-624
Cow position: chr3:4080360-4080852 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 100

Conread position: 127-695
Cow position: chr3:13471085-13471674 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 94

Conread position: 127-697
Cow position: chr3:2075448-2074853 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 375
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 160

Conread position: 127-697
Cow position: chr3:2573195-2572598 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 384
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 104, 160

Conread position: 127-697
Cow position: chr3:2833871-2834468 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 379
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 104, 160

Conread position: 127-697
Cow position: chr3:7155139-7155736 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 368
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 160

Conread position: 127-697
Cow position: chr3:7245441-7246033 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 379
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 114

Conread position: 127-697
Cow position: chr3:16226542-16225948 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 379
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 104, 160

Conread position: 127-697
Cow position: chr3:19753068-19753656 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 384
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 104, 160

Conread position: 127-697
Cow position: chr3:20476166-20475585 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 364
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 160

Conread position: 127-697
Cow position: chr3:24265865-24265269 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 371
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 106, 160

Conread position: 127-697
Cow position: chr3:41018643-41019243 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 384
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 104, 160

Conread position: 127-697
Cow position: chr3:49336854-49336268 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 375
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 56, 98

Conread position: 127-697
Cow position: chr3:68696307-68696894 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 374
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 33, 44

Conread position: 127-697
Cow position: chr3:83767912-83767324 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 375
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 133

Conread position: 127-699
Cow position: chr3:322191-322791 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 392
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 201

Conread position: 127-701
Cow position: chr3:37972694-37972101 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 383
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 104, 160

Conread position: 127-715
Cow position: chr3:62755070-62754463 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 191

Conread position: 127-814
Cow position: chr3:65085601-65084901 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 452
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 103, 196

Conread position: 127-870
Cow position: chr3:80307866-80307144 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 82

Conread position: 127-910
Cow position: chr3:15417134-15416329 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 509
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 104, 196

Conread position: 127-912
Cow position: chr3:19881717-19880912 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 514
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 104, 160

Conread position: 131-697
Cow position: chr3:14438325-14438913 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 371
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 100, 156

Conread position: 131-824
Cow position: chr3:24484375-24485074 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 88

Conread position: 131-876
Cow position: chr3:8563421-8564158 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 158

Conread position: 134-455
Cow position: chr3:82352458-82352127 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 217
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 62, 57

Conread position: 134-521
Cow position: chr3:62246557-62246953 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 257
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 191

Conread position: 134-554
Cow position: chr3:15810145-15809728 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 276
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 97, 176

Conread position: 134-574
Cow position: chr3:76610421-76609980 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 301
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 101, 85

Conread position: 134-699
Cow position: chr3:58443720-58444302 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 54

Conread position: 134-717
Cow position: chr3:21652649-21652044 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 189

Conread position: 134-774
Cow position: chr3:41655184-41654544 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 95

Conread position: 139-455
Cow position: chr3:66047407-66047720 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 63

Conread position: 141-697
Cow position: chr3:18815147-18814577 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 374
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 137, 81

Conread position: 141-697
Cow position: chr3:20379066-20379646 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 371
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 137, 143

Conread position: 141-697
Cow position: chr3:74061121-74060540 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 375
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 90, 146

Conread position: 141-697
Cow position: chr3:78520699-78520118 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 370
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 90, 45

Conread position: 162-526
Cow position: chr3:62259165-62259541 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 251
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 150

Conread position: 165-696
Cow position: chr3:27090569-27091113 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 361
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 92

Conread position: 170-552
Cow position: chr3:20780836-20781235 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 262
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 154

Conread position: 170-717
Cow position: chr3:25997478-25998043 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 142

Conread position: 173-784
Cow position: chr3:69286421-69287042 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 398
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 6

Conread position: 179-423
Cow position: chr3:50344734-50344983 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 31

Conread position: 189-699
Cow position: chr3:65961486-65960957 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 362
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 69

Conread position: 192-492
Cow position: chr3:66409661-66409961 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 19, 132

Conread position: 195-697
Cow position: chr3:4039336-4039861 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 338
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 101

Conread position: 196-824
Cow position: chr3:47715869-47715262 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 126

Conread position: 211-704
Cow position: chr3:25471572-25471061 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 8

Conread position: 213-503
Cow position: chr3:2475484-2475792 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 82

Conread position: 213-511
Cow position: chr3:10669278-10668964 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 31

Conread position: 213-520
Cow position: chr3:58025460-58025781 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 31

Conread position: 213-690
Cow position: chr3:63159629-63159135 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 322
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 40

Conread position: 214-581
Cow position: chr3:8585835-8586225 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 16, 73

Conread position: 214-824
Cow position: chr3:57531714-57531086 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 409
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 133

Conread position: 223-700
Cow position: chr3:51539885-51539383 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 319
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 68

Conread position: 229-703
Cow position: chr3:34015976-34015476 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 318
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 57

Conread position: 229-704
Cow position: chr3:60151397-60150890 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 331
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 14, 214

Conread position: 230-716
Cow position: chr3:71828845-71829337 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 320
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 289

Conread position: 233-870
Cow position: chr3:19830608-19831244 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 411
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 55

Conread position: 233-921
Cow position: chr3:57661067-57660372 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 443
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 25, 98

Conread position: 240-702
Cow position: chr3:51458441-51457985 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 309
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 43

Conread position: 240-703
Cow position: chr3:22044612-22045095 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 310
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 40, 172

Conread position: 253-688
Cow position: chr3:23012743-23012290 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 297
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 69

Conread position: 266-572
Cow position: chr3:15201405-15201102 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 43

Conread position: 268-864
Cow position: chr3:36516064-36516656 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 372
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 65, 38

Conread position: 277-921
Cow position: chr3:66609050-66608417 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 412
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 184, 44

Conread position: 279-844
Cow position: chr3:29802323-29801741 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 372
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 42

Conread position: 292-683
Cow position: chr3:73406926-73406541 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 16

Conread position: 300-704
Cow position: chr3:6956999-6957398 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 274
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 92

Conread position: 313-700
Cow position: chr3:46852304-46851908 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 253
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 20

Conread position: 316-870
Cow position: chr3:7355033-7354482 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 365
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 32

Conread position: 346-717
Cow position: chr3:4677697-4677327 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 252
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 13

Conread position: 359-921
Cow position: chr3:53364660-53365196 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 370
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 112, 25

Conread position: 366-696
Cow position: chr3:77010481-77010815 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 220
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 60

Conread position: 377-623
Cow position: chr3:23017055-23017308 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 91, 20

Conread position: 379-814
Cow position: chr3:72536156-72535724 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 302
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 77, 37

Conread position: 392-716
Cow position: chr3:53907541-53907881 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 178

Conread position: 405-626
Cow position: chr3:79219039-79218814 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 6

Conread position: 427-624
Cow position: chr3:23750569-23750363 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 128

Conread position: 452-614
Cow position: chr3:34850811-34850981 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 467-912
Cow position: chr3:58103901-58103445 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 296
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 78

Show alignments to all cow chromosomes.