Cow genome map
Conread name: | Thy1-THY010098B08 |
Conread position: | 70-814 |
Cow position: | chr3:15308043-15307315 (view UCSC Genome Browser custom track) |
Alignm length: | 757 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 258 |
Conread position: | 96-697 |
Cow position: | chr3:56153981-56153370 (view UCSC Genome Browser custom track) |
Alignm length: | 623 |
Alignm identity: | 395 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 183, 58 |
Conread position: | 119-697 |
Cow position: | chr3:64024365-64024961 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 380 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 9, 94 |
Conread position: | 127-546 |
Cow position: | chr3:69951365-69950935 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 278 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 151, 113 |
Conread position: | 127-554 |
Cow position: | chr3:66029049-66028612 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 296 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 63, 198 |
Conread position: | 127-611 |
Cow position: | chr3:61955768-61955260 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 330 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 39, 90 |
Conread position: | 127-624 |
Cow position: | chr3:4080360-4080852 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 100 |
Conread position: | 127-695 |
Cow position: | chr3:13471085-13471674 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 127-697 |
Cow position: | chr3:2075448-2074853 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 375 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 104, 160 |
Conread position: | 127-697 |
Cow position: | chr3:2573195-2572598 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 384 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 104, 160 |
Conread position: | 127-697 |
Cow position: | chr3:2833871-2834468 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 379 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 104, 160 |
Conread position: | 127-697 |
Cow position: | chr3:7155139-7155736 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 368 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 104, 160 |
Conread position: | 127-697 |
Cow position: | chr3:7245441-7246033 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 379 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 104, 114 |
Conread position: | 127-697 |
Cow position: | chr3:16226542-16225948 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 379 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 104, 160 |
Conread position: | 127-697 |
Cow position: | chr3:19753068-19753656 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 384 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 104, 160 |
Conread position: | 127-697 |
Cow position: | chr3:20476166-20475585 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 364 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 104, 160 |
Conread position: | 127-697 |
Cow position: | chr3:24265865-24265269 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 371 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 106, 160 |
Conread position: | 127-697 |
Cow position: | chr3:41018643-41019243 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 384 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 104, 160 |
Conread position: | 127-697 |
Cow position: | chr3:49336854-49336268 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 375 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 56, 98 |
Conread position: | 127-697 |
Cow position: | chr3:68696307-68696894 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 374 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 33, 44 |
Conread position: | 127-697 |
Cow position: | chr3:83767912-83767324 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 375 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 104, 133 |
Conread position: | 127-699 |
Cow position: | chr3:322191-322791 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 392 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 68, 201 |
Conread position: | 127-701 |
Cow position: | chr3:37972694-37972101 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 383 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 104, 160 |
Conread position: | 127-715 |
Cow position: | chr3:62755070-62754463 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 191 |
Conread position: | 127-814 |
Cow position: | chr3:65085601-65084901 (view UCSC Genome Browser custom track) |
Alignm length: | 720 |
Alignm identity: | 452 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 103, 196 |
Conread position: | 127-870 |
Cow position: | chr3:80307866-80307144 (view UCSC Genome Browser custom track) |
Alignm length: | 761 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 82 |
Conread position: | 127-910 |
Cow position: | chr3:15417134-15416329 (view UCSC Genome Browser custom track) |
Alignm length: | 822 |
Alignm identity: | 509 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 104, 196 |
Conread position: | 127-912 |
Cow position: | chr3:19881717-19880912 (view UCSC Genome Browser custom track) |
Alignm length: | 825 |
Alignm identity: | 514 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 104, 160 |
Conread position: | 131-697 |
Cow position: | chr3:14438325-14438913 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 371 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 100, 156 |
Conread position: | 131-824 |
Cow position: | chr3:24484375-24485074 (view UCSC Genome Browser custom track) |
Alignm length: | 723 |
Alignm identity: | 481 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 88 |
Conread position: | 131-876 |
Cow position: | chr3:8563421-8564158 (view UCSC Genome Browser custom track) |
Alignm length: | 760 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 158 |
Conread position: | 134-455 |
Cow position: | chr3:82352458-82352127 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 217 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 62, 57 |
Conread position: | 134-521 |
Cow position: | chr3:62246557-62246953 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 257 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 70, 191 |
Conread position: | 134-554 |
Cow position: | chr3:15810145-15809728 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 276 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 97, 176 |
Conread position: | 134-574 |
Cow position: | chr3:76610421-76609980 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 301 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 101, 85 |
Conread position: | 134-699 |
Cow position: | chr3:58443720-58444302 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 54 |
Conread position: | 134-717 |
Cow position: | chr3:21652649-21652044 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 189 |
Conread position: | 134-774 |
Cow position: | chr3:41655184-41654544 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 95 |
Conread position: | 139-455 |
Cow position: | chr3:66047407-66047720 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 212 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 91, 63 |
Conread position: | 141-697 |
Cow position: | chr3:18815147-18814577 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 374 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 137, 81 |
Conread position: | 141-697 |
Cow position: | chr3:20379066-20379646 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 371 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 137, 143 |
Conread position: | 141-697 |
Cow position: | chr3:74061121-74060540 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 375 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 90, 146 |
Conread position: | 141-697 |
Cow position: | chr3:78520699-78520118 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 370 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 90, 45 |
Conread position: | 162-526 |
Cow position: | chr3:62259165-62259541 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 251 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 46, 150 |
Conread position: | 165-696 |
Cow position: | chr3:27090569-27091113 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 361 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 7, 92 |
Conread position: | 170-552 |
Cow position: | chr3:20780836-20781235 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 262 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 61, 154 |
Conread position: | 170-717 |
Cow position: | chr3:25997478-25998043 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 142 |
Conread position: | 173-784 |
Cow position: | chr3:69286421-69287042 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 398 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 62, 6 |
Conread position: | 179-423 |
Cow position: | chr3:50344734-50344983 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 180 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 62, 31 |
Conread position: | 189-699 |
Cow position: | chr3:65961486-65960957 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 362 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 42, 69 |
Conread position: | 192-492 |
Cow position: | chr3:66409661-66409961 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 205 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 19, 132 |
Conread position: | 195-697 |
Cow position: | chr3:4039336-4039861 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 338 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 36, 101 |
Conread position: | 196-824 |
Cow position: | chr3:47715869-47715262 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 126 |
Conread position: | 211-704 |
Cow position: | chr3:25471572-25471061 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 8 |
Conread position: | 213-503 |
Cow position: | chr3:2475484-2475792 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 215 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 23, 82 |
Conread position: | 213-511 |
Cow position: | chr3:10669278-10668964 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 212 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 18, 31 |
Conread position: | 213-520 |
Cow position: | chr3:58025460-58025781 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 222 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 22, 31 |
Conread position: | 213-690 |
Cow position: | chr3:63159629-63159135 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 322 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 18, 40 |
Conread position: | 214-581 |
Cow position: | chr3:8585835-8586225 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 272 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 16, 73 |
Conread position: | 214-824 |
Cow position: | chr3:57531714-57531086 (view UCSC Genome Browser custom track) |
Alignm length: | 646 |
Alignm identity: | 409 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 21, 133 |
Conread position: | 223-700 |
Cow position: | chr3:51539885-51539383 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 319 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 8, 68 |
Conread position: | 229-703 |
Cow position: | chr3:34015976-34015476 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 318 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 49, 57 |
Conread position: | 229-704 |
Cow position: | chr3:60151397-60150890 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 331 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 14, 214 |
Conread position: | 230-716 |
Cow position: | chr3:71828845-71829337 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 320 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 47, 289 |
Conread position: | 233-870 |
Cow position: | chr3:19830608-19831244 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 411 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 45, 55 |
Conread position: | 233-921 |
Cow position: | chr3:57661067-57660372 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 443 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 25, 98 |
Conread position: | 240-702 |
Cow position: | chr3:51458441-51457985 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 309 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 11, 43 |
Conread position: | 240-703 |
Cow position: | chr3:22044612-22045095 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 310 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 40, 172 |
Conread position: | 253-688 |
Cow position: | chr3:23012743-23012290 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 297 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 26, 69 |
Conread position: | 266-572 |
Cow position: | chr3:15201405-15201102 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 209 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 12, 43 |
Conread position: | 268-864 |
Cow position: | chr3:36516064-36516656 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 372 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 65, 38 |
Conread position: | 277-921 |
Cow position: | chr3:66609050-66608417 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 412 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 184, 44 |
Conread position: | 279-844 |
Cow position: | chr3:29802323-29801741 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 372 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 75, 42 |
Conread position: | 292-683 |
Cow position: | chr3:73406926-73406541 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 264 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 93, 16 |
Conread position: | 300-704 |
Cow position: | chr3:6956999-6957398 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 274 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 21, 92 |
Conread position: | 313-700 |
Cow position: | chr3:46852304-46851908 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 253 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 45, 20 |
Conread position: | 316-870 |
Cow position: | chr3:7355033-7354482 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 365 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 19, 32 |
Conread position: | 346-717 |
Cow position: | chr3:4677697-4677327 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 252 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 28, 13 |
Conread position: | 359-921 |
Cow position: | chr3:53364660-53365196 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 370 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 112, 25 |
Conread position: | 366-696 |
Cow position: | chr3:77010481-77010815 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 220 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 35, 60 |
Conread position: | 377-623 |
Cow position: | chr3:23017055-23017308 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 175 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 91, 20 |
Conread position: | 379-814 |
Cow position: | chr3:72536156-72535724 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 302 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 77, 37 |
Conread position: | 392-716 |
Cow position: | chr3:53907541-53907881 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 219 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 70, 178 |
Conread position: | 405-626 |
Cow position: | chr3:79219039-79218814 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 159 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 57, 6 |
Conread position: | 427-624 |
Cow position: | chr3:23750569-23750363 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 149 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 34, 128 |
Conread position: | 452-614 |
Cow position: | chr3:34850811-34850981 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 467-912 |
Cow position: | chr3:58103901-58103445 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 296 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 5, 78 |
Show alignments to all cow chromosomes.