Cow genome map


           Conread name:
           Thy1-THY010098B08
        

               Conread position:
               11-823
               

               Cow position:
               
               

               Alignm length:
               848
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               34-623
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               387
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               89-421
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               142, 42
               

               Conread position:
               119-697
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               381
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               112, 204
               

               Conread position:
               124-543
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               301
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               155, 6
               

               Conread position:
               126-689
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 15
               

               Conread position:
               127-552
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               104, 75
               

               Conread position:
               127-574
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               314
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               132, 118
               

               Conread position:
               127-611
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               334
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               83, 199
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               379
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               378
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               375
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               376
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               368
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               382
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 114
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               379
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 117
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               376
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               91, 197
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               372
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               104, 47
               

               Conread position:
               127-697
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               380
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-699
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               381
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-716
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 144
               

               Conread position:
               127-816
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 46
               

               Conread position:
               127-912
               

               Cow position:
               
               

               Alignm length:
               825
               

               Alignm identity:
               511
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-921
               

               Cow position:
               
               

               Alignm length:
               835
               

               Alignm identity:
               517
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               104, 160
               

               Conread position:
               127-921
               

               Cow position:
               
               

               Alignm length:
               835
               

               Alignm identity:
               513
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               128-623
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               348
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               95, 201
               

               Conread position:
               138-919
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 29
               

               Conread position:
               141-554
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               90, 183
               

               Conread position:
               141-574
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               299
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               90, 183
               

               Conread position:
               141-697
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               368
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               90, 145
               

               Conread position:
               141-697
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               367
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               91, 78
               

               Conread position:
               141-697
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               367
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               91, 78
               

               Conread position:
               145-572
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 144
               

               Conread position:
               145-921
               

               Cow position:
               
               

               Alignm length:
               821
               

               Alignm identity:
               515
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 21
               

               Conread position:
               149-441
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               170-646
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               311
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               172-921
               

               Cow position:
               
               

               Alignm length:
               782
               

               Alignm identity:
               471
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               87, 37
               

               Conread position:
               173-433
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               58, 95
               

               Conread position:
               183-727
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               369
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               7, 141
               

               Conread position:
               185-570
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               261
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               198-550
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 126
               

               Conread position:
               207-773
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               211-520
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               213-700
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               330
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               220-687
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 103
               

               Conread position:
               229-519
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               106, 90
               

               Conread position:
               236-685
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               238-870
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               249-572
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               254-697
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               273-824
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               365
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               104, 29
               

               Conread position:
               279-702
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               294
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               279-830
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               365
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               279-921
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               425
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               290-921
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               430
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               338-914
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               378
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               48, 73
               

               Conread position:
               348-840
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               331
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               6, 181
               

               Conread position:
               354-688
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               23, 93
               

               Conread position:
               377-913
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               344
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               77, 365
               

               Conread position:
               379-921
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               350
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               80, 62
               

               Conread position:
               470-902
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 82
               

               Conread position:
               475-916
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 88
               

               Conread position:
               488-913
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               82, 54
               

               Conread position:
               502-712
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               620-920
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 120
               
Show alignments to all cow chromosomes.