Cow genome map
| Conread name: | Thy1-THY010098B08 |
| Conread position: | 116-711 |
| Cow position: | chr6:20093992-20094609 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 211 |
| Conread position: | 117-626 |
| Cow position: | chr6:27138408-27138924 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 335 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 92, 138 |
| Conread position: | 119-443 |
| Cow position: | chr6:33296964-33296640 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 122-921 |
| Cow position: | chr6:7466934-7467754 (view UCSC Genome Browser custom track) |
| Alignm length: | 839 |
| Alignm identity: | 520 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 109, 165 |
| Conread position: | 127-486 |
| Cow position: | chr6:54139905-54140273 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 104, 60 |
| Conread position: | 127-519 |
| Cow position: | chr6:51674477-51674065 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 104, 75 |
| Conread position: | 127-697 |
| Cow position: | chr6:21712418-21711821 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 379 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 103, 160 |
| Conread position: | 127-697 |
| Cow position: | chr6:25374396-25374993 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 380 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-697 |
| Cow position: | chr6:33466667-33466073 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 379 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 104, 85 |
| Conread position: | 127-708 |
| Cow position: | chr6:31304720-31304130 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 391 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 105, 35 |
| Conread position: | 127-716 |
| Cow position: | chr6:26324489-26325103 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 390 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 104, 48 |
| Conread position: | 127-791 |
| Cow position: | chr6:55593776-55593084 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 431 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 137, 84 |
| Conread position: | 127-890 |
| Cow position: | chr6:47526981-47526192 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 92 |
| Conread position: | 127-912 |
| Cow position: | chr6:22736994-22737802 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 512 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-912 |
| Cow position: | chr6:26771410-26772216 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 504 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-912 |
| Cow position: | chr6:45479376-45480171 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 511 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-912 |
| Cow position: | chr6:60379875-60379068 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 510 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-921 |
| Cow position: | chr6:7137630-7138444 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 511 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-921 |
| Cow position: | chr6:15154802-15154006 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 40 |
| Conread position: | 127-921 |
| Cow position: | chr6:22043298-22044112 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 501 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 104, 183 |
| Conread position: | 129-654 |
| Cow position: | chr6:18462845-18463399 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 131-493 |
| Cow position: | chr6:6706041-6705666 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 68 |
| Conread position: | 132-426 |
| Cow position: | chr6:20888443-20888746 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 134-527 |
| Cow position: | chr6:14806016-14805610 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 146, 76 |
| Conread position: | 135-816 |
| Cow position: | chr6:41645083-41645769 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 170 |
| Conread position: | 139-457 |
| Cow position: | chr6:32069805-32070122 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 96, 25 |
| Conread position: | 141-416 |
| Cow position: | chr6:7755253-7755534 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 94, 200 |
| Conread position: | 141-559 |
| Cow position: | chr6:34548720-34548293 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 141-697 |
| Cow position: | chr6:57521873-57521290 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 368 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 141-699 |
| Cow position: | chr6:38779525-38780106 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 381 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 72, 122 |
| Conread position: | 141-701 |
| Cow position: | chr6:11869238-11869823 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 369 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 71 |
| Conread position: | 141-911 |
| Cow position: | chr6:17111468-17112253 (view UCSC Genome Browser custom track) |
| Alignm length: | 806 |
| Alignm identity: | 489 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 161-688 |
| Cow position: | chr6:14456988-14457537 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 354 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 160 |
| Conread position: | 175-914 |
| Cow position: | chr6:52246159-52245416 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 480 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 181-567 |
| Cow position: | chr6:53722287-53722684 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 105 |
| Conread position: | 197-613 |
| Cow position: | chr6:48881429-48881880 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 311 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 33, 244 |
| Conread position: | 201-716 |
| Cow position: | chr6:23529583-23529040 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 142 |
| Conread position: | 213-428 |
| Cow position: | chr6:29242352-29242135 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 110 |
| Conread position: | 213-911 |
| Cow position: | chr6:17387149-17386435 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 454 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 233-550 |
| Cow position: | chr6:54377155-54376829 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 241-715 |
| Cow position: | chr6:61891889-61892370 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 326 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 346-704 |
| Cow position: | chr6:48670103-48670470 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 379-854 |
| Cow position: | chr6:32446756-32447213 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 322 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 389-692 |
| Cow position: | chr6:38213457-38213757 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 157 |
| Conread position: | 404-717 |
| Cow position: | chr6:54077177-54076857 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 60, 109 |
Show alignments to all cow chromosomes.