Cow genome map
| Conread name: | Thy1-THY010098B08 |
| Conread position: | 8-661 |
| Cow position: | chr7:35279138-35279778 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 433 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 22 |
| Conread position: | 37-707 |
| Cow position: | chr7:33653933-33654636 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 76 |
| Conread position: | 119-716 |
| Cow position: | chr7:26828967-26829593 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 398 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 112, 24 |
| Conread position: | 122-697 |
| Cow position: | chr7:11460329-11460930 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 378 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 123-699 |
| Cow position: | chr7:64406113-64405516 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 383 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 108, 86 |
| Conread position: | 127-453 |
| Cow position: | chr7:20450238-20450580 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 33 |
| Conread position: | 127-555 |
| Cow position: | chr7:66136607-66136167 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 305 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 94, 123 |
| Conread position: | 127-646 |
| Cow position: | chr7:16973195-16973721 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 127-697 |
| Cow position: | chr7:7248962-7249559 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 378 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-697 |
| Cow position: | chr7:7278359-7277761 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 374 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 56 |
| Conread position: | 127-697 |
| Cow position: | chr7:25416737-25416142 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 377 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 104, 85 |
| Conread position: | 127-697 |
| Cow position: | chr7:34548394-34547799 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 375 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 104, 194 |
| Conread position: | 127-697 |
| Cow position: | chr7:38189408-38188816 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 379 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-707 |
| Cow position: | chr7:31638331-31637729 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 377 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 108, 36 |
| Conread position: | 127-890 |
| Cow position: | chr7:20435632-20434865 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 492 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-912 |
| Cow position: | chr7:22598819-22598012 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 516 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 128-652 |
| Cow position: | chr7:23240174-23239641 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 83 |
| Conread position: | 128-697 |
| Cow position: | chr7:23141355-23140759 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 370 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 103, 159 |
| Conread position: | 129-625 |
| Cow position: | chr7:68548414-68547893 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 337 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 129-644 |
| Cow position: | chr7:12223961-12224487 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 360 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 131-691 |
| Cow position: | chr7:34832808-34832234 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 366 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 131-912 |
| Cow position: | chr7:845721-844918 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 508 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 100, 156 |
| Conread position: | 133-701 |
| Cow position: | chr7:30172459-30173037 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 377 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 98, 107 |
| Conread position: | 140-582 |
| Cow position: | chr7:49109187-49108742 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 66 |
| Conread position: | 141-554 |
| Cow position: | chr7:43963918-43964323 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 68 |
| Conread position: | 141-581 |
| Cow position: | chr7:19881729-19882171 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 297 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 90, 168 |
| Conread position: | 141-689 |
| Cow position: | chr7:39925169-39924625 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 360 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 141-870 |
| Cow position: | chr7:46195700-46194957 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 461 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 141-921 |
| Cow position: | chr7:48147116-48146353 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 494 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 36 |
| Conread position: | 146-843 |
| Cow position: | chr7:33452180-33451489 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 149-478 |
| Cow position: | chr7:34441811-34442134 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 151-418 |
| Cow position: | chr7:26722249-26722524 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 170-441 |
| Cow position: | chr7:37526661-37526944 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 171-571 |
| Cow position: | chr7:10123246-10123654 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 172-646 |
| Cow position: | chr7:28536483-28535995 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 208-552 |
| Cow position: | chr7:63079118-63078757 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 208-690 |
| Cow position: | chr7:54184201-54184685 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 212-686 |
| Cow position: | chr7:26022493-26022003 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 213-455 |
| Cow position: | chr7:54189740-54189980 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 219-912 |
| Cow position: | chr7:43256679-43255982 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 462 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 11, 49 |
| Conread position: | 245-697 |
| Cow position: | chr7:40709433-40708959 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 245-716 |
| Cow position: | chr7:57558886-57558386 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 328 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 34, 372 |
| Conread position: | 252-706 |
| Cow position: | chr7:63589523-63589989 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 311 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 261-646 |
| Cow position: | chr7:24643710-24644082 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 129 |
Show alignments to all cow chromosomes.