Cow genome map
| Conread name: | Thy1-THY010098B08 |
| Conread position: | 127-455 |
| Cow position: | chr8:61063299-61063624 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 103, 17 |
| Conread position: | 127-488 |
| Cow position: | chr8:31624880-31624508 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 127-697 |
| Cow position: | chr8:4727642-4728238 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 383 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-697 |
| Cow position: | chr8:5196100-5195503 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 381 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-697 |
| Cow position: | chr8:45354521-45355093 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 360 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 48 |
| Conread position: | 127-697 |
| Cow position: | chr8:51446173-51446766 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 379 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 104, 86 |
| Conread position: | 127-701 |
| Cow position: | chr8:53320500-53319911 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 386 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 127-714 |
| Cow position: | chr8:14633949-14634556 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 396 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 109, 36 |
| Conread position: | 127-912 |
| Cow position: | chr8:13830949-13831754 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 506 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-912 |
| Cow position: | chr8:40585056-40584249 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 509 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 127-921 |
| Cow position: | chr8:18656752-18657558 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 511 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 128-434 |
| Cow position: | chr8:24683377-24683687 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 152, 92 |
| Conread position: | 128-697 |
| Cow position: | chr8:14259062-14258474 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 372 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 159 |
| Conread position: | 131-921 |
| Cow position: | chr8:31568845-31569618 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 88 |
| Conread position: | 133-426 |
| Cow position: | chr8:44007803-44008098 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 147, 105 |
| Conread position: | 133-716 |
| Cow position: | chr8:33094340-33093741 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 201 |
| Conread position: | 134-413 |
| Cow position: | chr8:8272453-8272738 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 101, 58 |
| Conread position: | 134-688 |
| Cow position: | chr8:18457711-18457144 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 371 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 134-890 |
| Cow position: | chr8:17200037-17200799 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 495 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 97, 187 |
| Conread position: | 141-716 |
| Cow position: | chr8:25677560-25678162 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 379 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 90, 180 |
| Conread position: | 145-718 |
| Cow position: | chr8:47182856-47183454 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 39 |
| Conread position: | 149-612 |
| Cow position: | chr8:52564559-52565040 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 310 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 153-567 |
| Cow position: | chr8:43771488-43771076 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 278 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 93, 42 |
| Conread position: | 164-501 |
| Cow position: | chr8:6986624-6986286 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 115 |
| Conread position: | 170-862 |
| Cow position: | chr8:27685290-27684618 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 89 |
| Conread position: | 175-921 |
| Cow position: | chr8:53003969-53004720 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 473 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 71, 149 |
| Conread position: | 197-699 |
| Cow position: | chr8:46594169-46593656 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 349 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 211-700 |
| Cow position: | chr8:31222991-31222477 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 338 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 69, 109 |
| Conread position: | 213-478 |
| Cow position: | chr8:23384521-23384793 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 252 |
| Conread position: | 213-699 |
| Cow position: | chr8:47949845-47949349 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 316 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 213-700 |
| Cow position: | chr8:40109068-40108568 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 216-914 |
| Cow position: | chr8:22379947-22380634 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 95 |
| Conread position: | 233-595 |
| Cow position: | chr8:28294012-28294391 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 45, 101 |
| Conread position: | 234-699 |
| Cow position: | chr8:12455067-12454589 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 312 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 239-618 |
| Cow position: | chr8:24493368-24492977 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 265-704 |
| Cow position: | chr8:21343569-21343107 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 270-685 |
| Cow position: | chr8:15188263-15188699 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 67 |
| Conread position: | 280-654 |
| Cow position: | chr8:30889537-30889150 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 7 |
| Conread position: | 296-898 |
| Cow position: | chr8:23255982-23255353 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 430 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 311-558 |
| Cow position: | chr8:57180717-57180978 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 362-843 |
| Cow position: | chr8:1641086-1640593 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 307 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 392-716 |
| Cow position: | chr8:57691157-57690817 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 127 |
| Conread position: | 408-699 |
| Cow position: | chr8:47820825-47821123 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 451-715 |
| Cow position: | chr8:52644731-52644458 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 20, 60 |
Show alignments to all cow chromosomes.