Cow genome map
| Conread name: | Thy1-THY010102A12 |
| Conread position: | 1-96 |
| Cow position: | chr1:33895818-33895913 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-140 |
| Cow position: | chr1:48245950-48246095 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-140 |
| Cow position: | chr1:55276347-55276203 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-140 |
| Cow position: | chr1:99911097-99911240 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-146 |
| Cow position: | chr1:33551057-33551205 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 1-150 |
| Cow position: | chr1:89740125-89739978 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 37 |
| Conread position: | 1-153 |
| Cow position: | chr1:67835001-67834845 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-154 |
| Cow position: | chr1:63605643-63605486 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-156 |
| Cow position: | chr1:40684552-40684393 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-157 |
| Cow position: | chr1:56489979-56490139 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-158 |
| Cow position: | chr1:42736591-42736751 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-158 |
| Cow position: | chr1:68607405-68607244 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-158 |
| Cow position: | chr1:69922300-69922139 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-158 |
| Cow position: | chr1:72981405-72981566 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-158 |
| Cow position: | chr1:85791825-85791986 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:11291967-11291805 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 94, 54 |
| Conread position: | 1-159 |
| Cow position: | chr1:25179892-25179730 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:28873212-28873374 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:29362435-29362597 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:52359139-52358977 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:56193793-56193631 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:57568089-57568252 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:58335973-58336135 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:58883929-58883767 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:59210000-59209838 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:60339444-60339606 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:62244509-62244347 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:65386466-65386628 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:73070918-73070756 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:76622819-76622657 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:79456834-79456672 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:82913005-82912843 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:85780642-85780480 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:85882141-85882302 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:86699079-86698917 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:88130909-88131071 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:89425726-89425874 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:91892980-91892823 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 97, 37 |
| Conread position: | 1-159 |
| Cow position: | chr1:93854659-93854821 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-159 |
| Cow position: | chr1:95239508-95239670 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 94, 138 |
| Conread position: | 1-159 |
| Cow position: | chr1:102434900-102434739 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 96, 63 |
| Conread position: | 1-167 |
| Cow position: | chr1:39543907-39544078 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-170 |
| Cow position: | chr1:69060634-69060797 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 166, 38 |
| Conread position: | 1-171 |
| Cow position: | chr1:56163465-56163635 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 146 |
| Conread position: | 1-171 |
| Cow position: | chr1:76752515-76752340 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:8554467-8554642 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:17012600-17012425 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:18880254-18880079 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:28711055-28711230 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:31396829-31397004 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:40053494-40053669 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:61309141-61309317 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:62925752-62925927 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-172 |
| Cow position: | chr1:86547996-86547821 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:1461194-1461018 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 1-173 |
| Cow position: | chr1:13645852-13646026 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 1-173 |
| Cow position: | chr1:21999819-21999643 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:28723011-28723190 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:28801265-28801086 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:38414939-38415112 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 97, 17 |
| Conread position: | 1-173 |
| Cow position: | chr1:57366994-57366818 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 97, 163 |
| Conread position: | 1-173 |
| Cow position: | chr1:57656683-57656858 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 94, 118 |
| Conread position: | 1-173 |
| Cow position: | chr1:69537038-69537211 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 94, 75 |
| Conread position: | 1-173 |
| Cow position: | chr1:71562435-71562259 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:72080917-72081093 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:72186734-72186562 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 155, 101 |
| Conread position: | 1-173 |
| Cow position: | chr1:72657125-72657301 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:82918523-82918350 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 94, 15 |
| Conread position: | 1-173 |
| Cow position: | chr1:87207289-87207114 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 94, 146 |
| Conread position: | 1-173 |
| Cow position: | chr1:88635510-88635685 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 1-173 |
| Cow position: | chr1:89770546-89770370 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-173 |
| Cow position: | chr1:89899565-89899391 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 89, 154 |
| Conread position: | 1-173 |
| Cow position: | chr1:97123950-97124122 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 1-173 |
| Cow position: | chr1:97226567-97226397 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 90, 38 |
| Conread position: | 1-173 |
| Cow position: | chr1:101149971-101150147 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-174 |
| Cow position: | chr1:9382406-9382228 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 69 |
| Conread position: | 1-174 |
| Cow position: | chr1:17036419-17036237 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-174 |
| Cow position: | chr1:69766601-69766782 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-174 |
| Cow position: | chr1:82564642-82564823 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-174 |
| Cow position: | chr1:91718499-91718323 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 1-174 |
| Cow position: | chr1:91899135-91899316 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-180 |
| Cow position: | chr1:56144200-56144017 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-180 |
| Cow position: | chr1:82924041-82923858 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-192 |
| Cow position: | chr1:5502072-5502267 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-192 |
| Cow position: | chr1:49974052-49973855 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-192 |
| Cow position: | chr1:100597235-100597038 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-193 |
| Cow position: | chr1:18406057-18405857 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 1-193 |
| Cow position: | chr1:31365938-31365743 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 135 |
| Conread position: | 1-193 |
| Cow position: | chr1:42290526-42290722 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 158, 93 |
| Conread position: | 1-193 |
| Cow position: | chr1:45097835-45098035 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 88, 123 |
| Conread position: | 1-193 |
| Cow position: | chr1:78290002-78290199 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-193 |
| Cow position: | chr1:79636792-79636598 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 94, 43 |
| Conread position: | 1-193 |
| Cow position: | chr1:102549386-102549582 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 1-195 |
| Cow position: | chr1:52232977-52232776 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-202 |
| Cow position: | chr1:56723294-56723502 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 97, 54 |
| Conread position: | 1-202 |
| Cow position: | chr1:99348899-99348689 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-208 |
| Cow position: | chr1:12062058-12061848 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 89, 155 |
| Conread position: | 1-208 |
| Cow position: | chr1:79335666-79335450 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-211 |
| Cow position: | chr1:20829028-20829246 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 94, 203 |
| Conread position: | 1-211 |
| Cow position: | chr1:21087552-21087770 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 94, 203 |
| Conread position: | 1-211 |
| Cow position: | chr1:33851417-33851634 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 94, 124 |
| Conread position: | 1-211 |
| Cow position: | chr1:40574354-40574570 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 106 |
| Conread position: | 1-211 |
| Cow position: | chr1:80359040-80358824 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 94, 15 |
| Conread position: | 1-211 |
| Cow position: | chr1:82652792-82653010 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 93, 203 |
| Conread position: | 1-224 |
| Cow position: | chr1:34689478-34689707 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-262 |
| Cow position: | chr1:25887022-25886760 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 94, 82 |
| Conread position: | 1-262 |
| Cow position: | chr1:67901792-67901513 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-262 |
| Cow position: | chr1:72136778-72137041 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 94, 164 |
| Conread position: | 1-262 |
| Cow position: | chr1:102556190-102556443 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 1-281 |
| Cow position: | chr1:30027407-30027127 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 1-490 |
| Cow position: | chr1:94253056-94253552 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 259 |
| Conread position: | 1-592 |
| Cow position: | chr1:21720027-21720615 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 207 |
| Conread position: | 2-159 |
| Cow position: | chr1:30283403-30283242 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-159 |
| Cow position: | chr1:94659821-94659982 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-240 |
| Cow position: | chr1:5318886-5319123 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 2-240 |
| Cow position: | chr1:98661172-98660934 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 2-250 |
| Cow position: | chr1:54365687-54365439 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 89, 41 |
| Conread position: | 2-408 |
| Cow position: | chr1:42870103-42869685 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 173 |
| Conread position: | 2-578 |
| Cow position: | chr1:40513239-40512657 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 106 |
| Conread position: | 3-134 |
| Cow position: | chr1:40954042-40954177 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-172 |
| Cow position: | chr1:62853705-62853527 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 3-173 |
| Cow position: | chr1:8825191-8825364 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 92, 142 |
| Conread position: | 3-173 |
| Cow position: | chr1:33712204-33712378 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 145 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 3-173 |
| Cow position: | chr1:40308203-40308372 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-173 |
| Cow position: | chr1:87244951-87245125 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-174 |
| Cow position: | chr1:13450347-13450526 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-190 |
| Cow position: | chr1:18244244-18244051 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-369 |
| Cow position: | chr1:55322917-55322544 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 4-166 |
| Cow position: | chr1:101857843-101857678 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 8-195 |
| Cow position: | chr1:59674595-59674789 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 9-158 |
| Cow position: | chr1:69403126-69403279 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 12-173 |
| Cow position: | chr1:18027620-18027455 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 15-220 |
| Cow position: | chr1:72039196-72038987 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 26-238 |
| Cow position: | chr1:87516120-87515898 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 187 |
| Conread position: | 41-253 |
| Cow position: | chr1:89479484-89479706 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 57, 68 |
| Conread position: | 42-555 |
| Cow position: | chr1:24650935-24651440 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 213 |
| Conread position: | 45-174 |
| Cow position: | chr1:57424657-57424519 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 48-167 |
| Cow position: | chr1:5355312-5355435 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 108-364 |
| Cow position: | chr1:38387458-38387208 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 121-262 |
| Cow position: | chr1:31418696-31418555 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 155-265 |
| Cow position: | chr1:29414311-29414199 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 180-594 |
| Cow position: | chr1:67286827-67287234 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 123 |
| Conread position: | 260-507 |
| Cow position: | chr1:31418469-31418215 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 31, 109 |
| Conread position: | 260-561 |
| Cow position: | chr1:84150075-84150375 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 260-567 |
| Cow position: | chr1:73011177-73011487 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 20, 172 |
| Conread position: | 260-587 |
| Cow position: | chr1:33389190-33389530 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 287-549 |
| Cow position: | chr1:30027028-30026783 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 61 |
| Conread position: | 316-594 |
| Cow position: | chr1:29033249-29033523 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 212, 41 |
| Conread position: | 318-594 |
| Cow position: | chr1:63501984-63502257 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 194, 109 |
| Conread position: | 341-584 |
| Cow position: | chr1:91445433-91445671 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 180, 78 |
| Conread position: | 343-578 |
| Cow position: | chr1:88270055-88269822 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 169, 131 |
| Conread position: | 358-592 |
| Cow position: | chr1:29413971-29413744 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 222, 116 |
| Conread position: | 373-585 |
| Cow position: | chr1:38387157-38386961 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 206, 7 |
| Conread position: | 374-564 |
| Cow position: | chr1:30059111-30059299 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 90 |
| Conread position: | 374-594 |
| Cow position: | chr1:67328077-67327859 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 205, 100 |
| Conread position: | 377-594 |
| Cow position: | chr1:55321952-55321735 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 143, 20 |
| Conread position: | 381-546 |
| Cow position: | chr1:98659686-98659522 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 94 |
| Conread position: | 381-594 |
| Cow position: | chr1:58179502-58179298 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 199, 25 |
| Conread position: | 419-594 |
| Cow position: | chr1:86610069-86610238 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 8 |
Show alignments to all cow chromosomes.