Cow genome map


           Conread name:
           Thy1-THY010102A12
        

               Conread position:
               1-126
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               1-144
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               97, 66
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 145
               

               Conread position:
               1-170
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               94, 140
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-180
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               94, 204
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               94, 203
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               94, 203
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               94, 203
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 111
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 136
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 95
               

               Conread position:
               1-269
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               76, 40
               

               Conread position:
               1-566
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 362
               

               Conread position:
               1-587
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 215
               

               Conread position:
               1-594
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               2-173
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               2-174
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               93, 140
               

               Conread position:
               2-174
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 147
               

               Conread position:
               2-262
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               24, 81
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 203
               

               Conread position:
               3-105
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               3-172
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               3-174
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               95, 76
               

               Conread position:
               3-240
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               3-251
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               92, 127
               

               Conread position:
               4-145
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               4-247
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               204, 159
               

               Conread position:
               5-211
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               90, 199
               

               Conread position:
               7-173
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               11-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               11-171
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               84, 128
               

               Conread position:
               30-438
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 123
               

               Conread position:
               41-172
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               48-295
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               65-221
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               94-262
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               94-262
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               106, 38
               

               Conread position:
               107-358
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 33
               

               Conread position:
               256-584
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               260-527
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               260-594
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               176, 47
               

               Conread position:
               260-594
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 209
               

               Conread position:
               291-569
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               218, 73
               

               Conread position:
               332-534
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               332-534
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               335-594
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 143
               

               Conread position:
               348-597
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               155, 32
               

               Conread position:
               364-584
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               373-475
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               374-587
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               70, 6
               

               Conread position:
               393-575
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               412-594
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               428-594
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               106, 51
               
Show alignments to all cow chromosomes.