Cow genome map

Conread name: Thy1-THY010102A12

Conread position: 1-126
Cow position: chr10:39905104-39905232 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 23

Conread position: 1-144
Cow position: chr10:46694214-46694067 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-146
Cow position: chr10:7282525-7282376 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 1-146
Cow position: chr10:13365708-13365559 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 1-154
Cow position: chr10:62408695-62408538 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 1-155
Cow position: chr10:57989827-57989674 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 17

Conread position: 1-158
Cow position: chr10:47906940-47907101 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 97, 0

Conread position: 1-159
Cow position: chr10:1375693-1375857 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 1-159
Cow position: chr10:2123100-2122938 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr10:8290145-8290302 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 97, 17

Conread position: 1-159
Cow position: chr10:16925698-16925859 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 1-159
Cow position: chr10:21487076-21487239 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 1-159
Cow position: chr10:25359561-25359723 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr10:32650895-32651057 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr10:38345200-38345038 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr10:39041140-39040978 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 1-159
Cow position: chr10:51952456-51952298 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 97, 66

Conread position: 1-166
Cow position: chr10:32578451-32578620 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 145

Conread position: 1-170
Cow position: chr10:47157110-47157283 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 140

Conread position: 1-172
Cow position: chr10:19758513-19758685 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 32, 14

Conread position: 1-172
Cow position: chr10:19802718-19802890 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 32, 14

Conread position: 1-173
Cow position: chr10:11685509-11685331 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position: chr10:25498514-25498690 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position: chr10:37769983-37770161 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 1-173
Cow position: chr10:39853852-39853672 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 1-173
Cow position: chr10:62216768-62216945 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position: chr10:62778509-62778686 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 94, 0

Conread position: 1-174
Cow position: chr10:4192071-4191883 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 1-174
Cow position: chr10:14803998-14804179 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-174
Cow position: chr10:19496124-19495943 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 1-174
Cow position: chr10:19511768-19511945 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 1-180
Cow position: chr10:34686055-34686239 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 1-190
Cow position: chr10:29696398-29696586 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 97, 17

Conread position: 1-192
Cow position: chr10:124472-124669 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 1-193
Cow position: chr10:41877081-41877281 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 97, 32

Conread position: 1-202
Cow position: chr10:22101394-22101596 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 67

Conread position: 1-211
Cow position: chr10:280459-280243 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 94, 204

Conread position: 1-211
Cow position: chr10:21400509-21400291 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 94, 203

Conread position: 1-211
Cow position: chr10:21740590-21740372 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 94, 203

Conread position: 1-211
Cow position: chr10:39179945-39180163 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 94, 203

Conread position: 1-219
Cow position: chr10:39817201-39816968 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-235
Cow position: chr10:3543420-3543194 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 21

Conread position: 1-262
Cow position: chr10:15861975-15861705 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 111

Conread position: 1-262
Cow position: chr10:34318129-34317871 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 38

Conread position: 1-262
Cow position: chr10:46191520-46191781 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 136

Conread position: 1-264
Cow position: chr10:24298692-24298428 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 95

Conread position: 1-269
Cow position: chr10:38847520-38847778 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 40

Conread position: 1-566
Cow position: chr10:42628785-42629356 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 362

Conread position: 1-587
Cow position: chr10:38546063-38545481 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 215

Conread position: 1-594
Cow position: chr10:31523961-31524525 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 17

Conread position: 2-173
Cow position: chr10:16475924-16476095 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 14

Conread position: 2-174
Cow position: chr10:24977976-24977799 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 140

Conread position: 2-174
Cow position: chr10:41567266-41567445 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 147

Conread position: 2-262
Cow position: chr10:8328109-8327846 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 81

Conread position: 2-264
Cow position: chr10:33346763-33347029 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 203

Conread position: 3-105
Cow position: chr10:29632699-29632599 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 3-172
Cow position: chr10:10477977-10477798 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 3-174
Cow position: chr10:41157611-41157790 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 92, 0

Conread position: 3-230
Cow position: chr10:40751812-40752041 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 76

Conread position: 3-240
Cow position: chr10:22842914-22843156 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 21

Conread position: 3-251
Cow position: chr10:60192295-60192549 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 92, 127

Conread position: 4-145
Cow position: chr10:29846486-29846341 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 4-247
Cow position: chr10:20371809-20371565 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 204, 159

Conread position: 5-211
Cow position: chr10:25565092-25564878 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 90, 199

Conread position: 7-173
Cow position: chr10:40152287-40152116 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 11-146
Cow position: chr10:19497145-19497005 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 11-171
Cow position: chr10:57559364-57559200 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 84, 128

Conread position: 30-438
Cow position: chr10:54979280-54978888 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 123

Conread position: 41-172
Cow position: chr10:56064875-56065010 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 48-295
Cow position: chr10:49310694-49310948 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 65-221
Cow position: chr10:42679599-42679761 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 94-262
Cow position: chr10:28931554-28931383 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 14

Conread position: 94-262
Cow position: chr10:60489853-60490022 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 106, 38

Conread position: 107-358
Cow position: chr10:8339168-8339423 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 33

Conread position: 256-584
Cow position: chr10:41775144-41774814 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 222
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 53

Conread position: 260-527
Cow position: chr10:33347113-33347385 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 31, 51

Conread position: 260-594
Cow position: chr10:14861358-14861688 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 176, 47

Conread position: 260-594
Cow position: chr10:28931299-28930962 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 209

Conread position: 291-569
Cow position: chr10:60192677-60192940 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 218, 73

Conread position: 332-534
Cow position: chr10:13364347-13364149 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 332-534
Cow position: chr10:13365537-13365339 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 335-594
Cow position: chr10:32064746-32065014 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 143

Conread position: 348-597
Cow position: chr10:38847902-38848144 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 155, 32

Conread position: 364-584
Cow position: chr10:3543023-3542809 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 373-475
Cow position: chr10:8339506-8339606 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 374-587
Cow position: chr10:21900568-21900359 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 6

Conread position: 393-575
Cow position: chr10:20370987-20370815 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 412-594
Cow position: chr10:42110581-42110764 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 20, 54

Conread position: 428-594
Cow position: chr10:42749032-42749199 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 106, 51

Show alignments to all cow chromosomes.