Cow genome map
Conread name: | Thy1-THY010102A12 |
Conread position: | 1-115 |
Cow position: | chr11:63659781-63659663 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-119 |
Cow position: | chr11:44860729-44860607 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-140 |
Cow position: | chr11:9734847-9734705 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 117 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 94, 63 |
Conread position: | 1-146 |
Cow position: | chr11:12358625-12358476 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 1-146 |
Cow position: | chr11:19102686-19102537 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-146 |
Cow position: | chr11:77235515-77235664 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 122 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-154 |
Cow position: | chr11:28054800-28054643 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-154 |
Cow position: | chr11:37093261-37093105 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 94, 124 |
Conread position: | 1-155 |
Cow position: | chr11:29668828-29668673 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 89, 68 |
Conread position: | 1-159 |
Cow position: | chr11:1496274-1496112 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 137 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr11:4027763-4027601 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 125 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 1-159 |
Cow position: | chr11:10847245-10847404 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 97, 47 |
Conread position: | 1-159 |
Cow position: | chr11:11987908-11988069 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 124 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 1-159 |
Cow position: | chr11:24393117-24393279 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 126 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr11:26125131-26124969 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr11:37477319-37477157 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 132 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-159 |
Cow position: | chr11:38505804-38505643 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 125 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 94, 34 |
Conread position: | 1-159 |
Cow position: | chr11:38835621-38835469 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 1-159 |
Cow position: | chr11:41170892-41170730 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 125 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr11:43514830-43514668 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 129 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 44, 56 |
Conread position: | 1-159 |
Cow position: | chr11:52419188-52419350 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 129 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr11:57628246-57628084 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 127 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr11:71329444-71329606 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 129 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr11:72110165-72110003 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr11:85394011-85393849 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-172 |
Cow position: | chr11:12093357-12093533 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 138 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-172 |
Cow position: | chr11:20920945-20920770 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 140 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-172 |
Cow position: | chr11:36744380-36744205 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 136 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-172 |
Cow position: | chr11:61401251-61401076 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 141 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-172 |
Cow position: | chr11:64045798-64045973 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 137 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-172 |
Cow position: | chr11:73477108-73477283 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 137 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-173 |
Cow position: | chr11:8887356-8887182 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 140 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 94, 25 |
Conread position: | 1-173 |
Cow position: | chr11:21466877-21467053 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 134 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 1-173 |
Cow position: | chr11:37065321-37065142 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 145 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-173 |
Cow position: | chr11:37491841-37491670 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 138 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 96, 16 |
Conread position: | 1-173 |
Cow position: | chr11:75920213-75920378 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 127 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 1-174 |
Cow position: | chr11:3492811-3492992 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 144 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-174 |
Cow position: | chr11:8519793-8519966 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 138 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 95, 53 |
Conread position: | 1-174 |
Cow position: | chr11:19064449-19064268 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 146 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-174 |
Cow position: | chr11:25527360-25527537 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 147 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 95, 13 |
Conread position: | 1-174 |
Cow position: | chr11:28229953-28229776 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 138 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 94, 157 |
Conread position: | 1-174 |
Cow position: | chr11:33194753-33194572 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-174 |
Cow position: | chr11:67846771-67846590 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 146 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-187 |
Cow position: | chr11:9606777-9606585 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 147 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 84, 42 |
Conread position: | 1-193 |
Cow position: | chr11:34020688-34020887 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 152 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 1-193 |
Cow position: | chr11:40776742-40776548 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 152 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 94, 138 |
Conread position: | 1-193 |
Cow position: | chr11:45111167-45111366 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 158 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 1-195 |
Cow position: | chr11:12351265-12351064 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 162 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-211 |
Cow position: | chr11:15983424-15983642 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 164 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 94, 203 |
Conread position: | 1-211 |
Cow position: | chr11:67450299-67450516 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 167 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 94, 15 |
Conread position: | 1-214 |
Cow position: | chr11:17220419-17220198 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 169 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 1-226 |
Cow position: | chr11:4065434-4065199 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 167 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 1-248 |
Cow position: | chr11:17280494-17280254 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 188 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 103, 85 |
Conread position: | 1-367 |
Cow position: | chr11:8282876-8283242 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 283 |
Conread position: | 1-444 |
Cow position: | chr11:7316673-7317125 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 60 |
Conread position: | 2-128 |
Cow position: | chr11:30305032-30305160 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 109 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 96, 117 |
Conread position: | 2-159 |
Cow position: | chr11:53287654-53287494 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 128 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 93, 151 |
Conread position: | 2-169 |
Cow position: | chr11:8261902-8261732 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 139 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 95, 129 |
Conread position: | 2-169 |
Cow position: | chr11:28063482-28063648 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 96, 36 |
Conread position: | 2-173 |
Cow position: | chr11:31925969-31926147 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 133 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 50, 39 |
Conread position: | 2-240 |
Cow position: | chr11:42429135-42429379 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 169 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 93, 20 |
Conread position: | 2-241 |
Cow position: | chr11:87127642-87127886 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 166 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 96, 37 |
Conread position: | 2-594 |
Cow position: | chr11:10090134-10090744 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 482 |
Conread position: | 3-157 |
Cow position: | chr11:4041270-4041116 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 125 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 92, 15 |
Conread position: | 3-159 |
Cow position: | chr11:5343415-5343255 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 133 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 3-159 |
Cow position: | chr11:17107884-17107724 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 130 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 3-159 |
Cow position: | chr11:23877105-23877264 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 92, 28 |
Conread position: | 3-222 |
Cow position: | chr11:32450669-32450903 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 177 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 5-169 |
Cow position: | chr11:9220316-9220147 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 134 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 9-173 |
Cow position: | chr11:8244515-8244680 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 89, 35 |
Conread position: | 20-173 |
Cow position: | chr11:9659568-9659411 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 130 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 30-167 |
Cow position: | chr11:76374371-76374231 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 65, 91 |
Conread position: | 38-153 |
Cow position: | chr11:53432229-53432110 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 78-247 |
Cow position: | chr11:10050589-10050763 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 125 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 149-562 |
Cow position: | chr11:7113840-7114239 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 14 |
Conread position: | 260-594 |
Cow position: | chr11:87128524-87128852 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 228 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 35, 55 |
Conread position: | 294-587 |
Cow position: | chr11:28049433-28049141 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 201 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 57, 62 |
Conread position: | 330-563 |
Cow position: | chr11:8261735-8261509 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 172 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 191, 27 |
Conread position: | 330-585 |
Cow position: | chr11:9220152-9219899 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 185 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 35, 126 |
Conread position: | 330-591 |
Cow position: | chr11:28063645-28063906 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 95 |
Conread position: | 356-568 |
Cow position: | chr11:59369650-59369858 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 155 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 358-568 |
Cow position: | chr11:8283291-8283503 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 116 |
Conread position: | 367-594 |
Cow position: | chr11:30124579-30124352 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 180 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 146, 39 |
Conread position: | 373-594 |
Cow position: | chr11:52886197-52885980 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 162 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 152, 56 |
Conread position: | 387-561 |
Cow position: | chr11:42429873-42430050 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 78, 42 |
Conread position: | 400-584 |
Cow position: | chr11:29233392-29233205 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 136 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 128, 74 |
Show alignments to all cow chromosomes.