Cow genome map


           Conread name:
           Thy1-THY010102A12
        

               Conread position:
               1-115
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-119
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               94, 124
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 68
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               137
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 47
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               94, 34
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               44, 56
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               94, 25
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               96, 16
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               95, 53
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               94, 157
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               84, 42
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               94, 138
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               162
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               94, 203
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               94, 15
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               103, 85
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 283
               

               Conread position:
               1-444
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 60
               

               Conread position:
               2-128
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               96, 117
               

               Conread position:
               2-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               93, 151
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               95, 129
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               2-173
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               50, 39
               

               Conread position:
               2-240
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               96, 37
               

               Conread position:
               2-594
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 482
               

               Conread position:
               3-157
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               3-159
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-159
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-159
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               92, 28
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               5-169
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               9-173
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               89, 35
               

               Conread position:
               20-173
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               30-167
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 91
               

               Conread position:
               38-153
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               78-247
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               149-562
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               260-594
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               35, 55
               

               Conread position:
               294-587
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 62
               

               Conread position:
               330-563
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               191, 27
               

               Conread position:
               330-585
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 126
               

               Conread position:
               330-591
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 95
               

               Conread position:
               356-568
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               358-568
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 116
               

               Conread position:
               367-594
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               146, 39
               

               Conread position:
               373-594
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               152, 56
               

               Conread position:
               387-561
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 42
               

               Conread position:
               400-584
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               128, 74
               
Show alignments to all cow chromosomes.