Cow genome map
| Conread name: | Thy1-THY010102A12 |
| Conread position: | 1-159 |
| Cow position: | chr12:3360991-3361153 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr12:6406561-6406402 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-159 |
| Cow position: | chr12:8678035-8677872 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-159 |
| Cow position: | chr12:11098329-11098491 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-159 |
| Cow position: | chr12:21426781-21426943 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr12:22205660-22205499 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 94, 124 |
| Conread position: | 1-167 |
| Cow position: | chr12:2886-3056 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 94, 149 |
| Conread position: | 1-172 |
| Cow position: | chr12:251969-251794 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 1-172 |
| Cow position: | chr12:33986249-33986424 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-173 |
| Cow position: | chr12:2282633-2282809 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-173 |
| Cow position: | chr12:5861241-5861416 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 1-173 |
| Cow position: | chr12:14662546-14662370 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-173 |
| Cow position: | chr12:21198045-21198223 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-173 |
| Cow position: | chr12:21902026-21902202 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 1-173 |
| Cow position: | chr12:22332712-22332887 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 97, 15 |
| Conread position: | 1-173 |
| Cow position: | chr12:45261710-45261886 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-174 |
| Cow position: | chr12:32653631-32653812 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-187 |
| Cow position: | chr12:28765932-28765738 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-192 |
| Cow position: | chr12:20998045-20997845 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 1-194 |
| Cow position: | chr12:21941852-21942052 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 95, 74 |
| Conread position: | 1-196 |
| Cow position: | chr12:2838767-2838575 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 94, 80 |
| Conread position: | 1-202 |
| Cow position: | chr12:42859740-42859533 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-208 |
| Cow position: | chr12:8311268-8311486 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-211 |
| Cow position: | chr12:37558642-37558861 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 15, 204 |
| Conread position: | 1-418 |
| Cow position: | chr12:15951177-15950759 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 63 |
| Conread position: | 2-159 |
| Cow position: | chr12:25100973-25100812 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-211 |
| Cow position: | chr12:21254568-21254352 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 90, 204 |
| Conread position: | 2-239 |
| Cow position: | chr12:48405360-48405577 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 200, 78 |
| Conread position: | 3-159 |
| Cow position: | chr12:27932856-27932696 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-159 |
| Cow position: | chr12:43031295-43031136 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 95, 65 |
| Conread position: | 3-166 |
| Cow position: | chr12:23240093-23240260 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 11-241 |
| Cow position: | chr12:18501132-18501358 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 298-587 |
| Cow position: | chr12:348464-348753 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 399-515 |
| Cow position: | chr12:15950478-15950363 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.