Cow genome map
Conread name: | Thy1-THY010102A12 |
Conread position: | 1-122 |
Cow position: | chr13:23003650-23003527 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 1-144 |
Cow position: | chr13:47230121-47229974 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 119 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-146 |
Cow position: | chr13:6668257-6668108 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 1-152 |
Cow position: | chr13:2908584-2908428 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 126 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-159 |
Cow position: | chr13:1593289-1593127 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 1-159 |
Cow position: | chr13:2388952-2388790 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 132 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr13:3058245-3058082 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 134 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 1-159 |
Cow position: | chr13:4483663-4483822 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 94, 122 |
Conread position: | 1-159 |
Cow position: | chr13:4940954-4941116 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr13:9044367-9044528 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 125 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 89, 117 |
Conread position: | 1-159 |
Cow position: | chr13:15924518-15924356 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr13:17308341-17308503 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 132 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr13:32737956-32737794 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 120 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 1-159 |
Cow position: | chr13:32986191-32986029 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 132 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 7, 85 |
Conread position: | 1-159 |
Cow position: | chr13:35757107-35757269 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 128 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr13:50109328-50109490 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 128 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-159 |
Cow position: | chr13:60466203-60466365 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 131 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-171 |
Cow position: | chr13:34868606-34868783 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 140 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 1-173 |
Cow position: | chr13:3277020-3277196 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 141 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-173 |
Cow position: | chr13:31612469-31612294 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 126 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-173 |
Cow position: | chr13:33824865-33824693 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 133 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 97, 45 |
Conread position: | 1-173 |
Cow position: | chr13:34042503-34042327 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 94, 162 |
Conread position: | 1-173 |
Cow position: | chr13:34693029-34693207 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 142 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 1-173 |
Cow position: | chr13:62327718-62327540 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 142 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-174 |
Cow position: | chr13:13324615-13324796 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 144 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-174 |
Cow position: | chr13:15520649-15520472 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-175 |
Cow position: | chr13:21840328-21840147 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 142 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 1-191 |
Cow position: | chr13:35030422-35030615 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 145 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 10, 42 |
Conread position: | 1-193 |
Cow position: | chr13:4872943-4873141 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 157 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 1-193 |
Cow position: | chr13:34142793-34142595 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 147 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 1-193 |
Cow position: | chr13:34186819-34186626 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 94, 180 |
Conread position: | 1-193 |
Cow position: | chr13:34911512-34911315 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 153 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 97, 72 |
Conread position: | 1-194 |
Cow position: | chr13:34325808-34325611 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 153 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 94, 17 |
Conread position: | 1-211 |
Cow position: | chr13:49973550-49973769 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 164 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1-253 |
Cow position: | chr13:34767420-34767176 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 173 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 241, 95 |
Conread position: | 1-529 |
Cow position: | chr13:54284438-54284977 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 17 |
Conread position: | 1-594 |
Cow position: | chr13:20542507-20541903 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 17 |
Conread position: | 2-198 |
Cow position: | chr13:46732359-46732163 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 143 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 93, 105 |
Conread position: | 2-242 |
Cow position: | chr13:4178784-4178533 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 180 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 94, 226 |
Conread position: | 3-159 |
Cow position: | chr13:32544927-32545087 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 3-170 |
Cow position: | chr13:31832468-31832636 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 133 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 92, 154 |
Conread position: | 3-173 |
Cow position: | chr13:30657106-30656935 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 95, 55 |
Conread position: | 3-173 |
Cow position: | chr13:56730418-56730245 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 137 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 92, 113 |
Conread position: | 3-274 |
Cow position: | chr13:34111163-34111427 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 192 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 189, 68 |
Conread position: | 3-573 |
Cow position: | chr13:34937015-34937603 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 213 |
Conread position: | 4-160 |
Cow position: | chr13:3567663-3567823 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 130 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 4-211 |
Cow position: | chr13:31734212-31734001 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 155 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 91, 22 |
Conread position: | 10-159 |
Cow position: | chr13:676751-676904 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 123 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 11-158 |
Cow position: | chr13:3654449-3654299 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 84, 32 |
Conread position: | 37-193 |
Cow position: | chr13:33927683-33927519 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 61, 17 |
Conread position: | 44-575 |
Cow position: | chr13:15451647-15451125 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 112 |
Conread position: | 131-538 |
Cow position: | chr13:26843793-26844175 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 39 |
Conread position: | 260-561 |
Cow position: | chr13:34111502-34111806 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 200 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 123, 187 |
Conread position: | 287-586 |
Cow position: | chr13:43983252-43982956 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 217 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 109, 76 |
Conread position: | 348-578 |
Cow position: | chr13:34186616-34186398 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 367-597 |
Cow position: | chr13:48357478-48357700 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 172 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 154, 64 |
Conread position: | 373-564 |
Cow position: | chr13:46731805-46731615 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 140 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 140, 48 |
Show alignments to all cow chromosomes.