Cow genome map

Conread name: Thy1-THY010102A12

Conread position: 1-122
Cow position: chr13:23003650-23003527 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 1-144
Cow position: chr13:47230121-47229974 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 1-146
Cow position: chr13:6668257-6668108 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 1-152
Cow position: chr13:2908584-2908428 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 1-159
Cow position: chr13:1593289-1593127 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 1-159
Cow position: chr13:2388952-2388790 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr13:3058245-3058082 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 134
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 1-159
Cow position: chr13:4483663-4483822 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 122

Conread position: 1-159
Cow position: chr13:4940954-4941116 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr13:9044367-9044528 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 89, 117

Conread position: 1-159
Cow position: chr13:15924518-15924356 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr13:17308341-17308503 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr13:32737956-32737794 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 1-159
Cow position: chr13:32986191-32986029 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 85

Conread position: 1-159
Cow position: chr13:35757107-35757269 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr13:50109328-50109490 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr13:60466203-60466365 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 1-171
Cow position: chr13:34868606-34868783 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 1-173
Cow position: chr13:3277020-3277196 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position: chr13:31612469-31612294 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-173
Cow position: chr13:33824865-33824693 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 97, 45

Conread position: 1-173
Cow position: chr13:34042503-34042327 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 162

Conread position: 1-173
Cow position: chr13:34693029-34693207 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 1-173
Cow position: chr13:62327718-62327540 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-174
Cow position: chr13:13324615-13324796 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-174
Cow position: chr13:15520649-15520472 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 1-175
Cow position: chr13:21840328-21840147 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 93, 0

Conread position: 1-191
Cow position: chr13:35030422-35030615 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 42

Conread position: 1-193
Cow position: chr13:4872943-4873141 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 157
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 89, 0

Conread position: 1-193
Cow position: chr13:34142793-34142595 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 1-193
Cow position: chr13:34186819-34186626 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 94, 180

Conread position: 1-193
Cow position: chr13:34911512-34911315 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 97, 72

Conread position: 1-194
Cow position: chr13:34325808-34325611 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 17

Conread position: 1-211
Cow position: chr13:49973550-49973769 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-253
Cow position: chr13:34767420-34767176 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 241, 95

Conread position: 1-529
Cow position: chr13:54284438-54284977 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 17

Conread position: 1-594
Cow position: chr13:20542507-20541903 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 17

Conread position: 2-198
Cow position: chr13:46732359-46732163 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 105

Conread position: 2-242
Cow position: chr13:4178784-4178533 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 226

Conread position: 3-159
Cow position: chr13:32544927-32545087 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 3-170
Cow position: chr13:31832468-31832636 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 92, 154

Conread position: 3-173
Cow position: chr13:30657106-30656935 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 55

Conread position: 3-173
Cow position: chr13:56730418-56730245 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 92, 113

Conread position: 3-274
Cow position: chr13:34111163-34111427 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 189, 68

Conread position: 3-573
Cow position: chr13:34937015-34937603 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 213

Conread position: 4-160
Cow position: chr13:3567663-3567823 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 0

Conread position: 4-211
Cow position: chr13:31734212-31734001 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 91, 22

Conread position: 10-159
Cow position: chr13:676751-676904 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 85, 0

Conread position: 11-158
Cow position: chr13:3654449-3654299 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 32

Conread position: 37-193
Cow position: chr13:33927683-33927519 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 17

Conread position: 44-575
Cow position: chr13:15451647-15451125 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 112

Conread position: 131-538
Cow position: chr13:26843793-26844175 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 39

Conread position: 260-561
Cow position: chr13:34111502-34111806 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 200
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 187

Conread position: 287-586
Cow position: chr13:43983252-43982956 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 109, 76

Conread position: 348-578
Cow position: chr13:34186616-34186398 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 367-597
Cow position: chr13:48357478-48357700 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 154, 64

Conread position: 373-564
Cow position: chr13:46731805-46731615 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 140, 48

Show alignments to all cow chromosomes.