Cow genome map


           Conread name:
           Thy1-THY010102A12
        

               Conread position:
               1-122
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-144
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-152
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               89, 117
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               7, 85
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               94, 162
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-175
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 42
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               94, 180
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               97, 72
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               241, 95
               

               Conread position:
               1-529
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               1-594
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               2-198
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               93, 105
               

               Conread position:
               2-242
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               94, 226
               

               Conread position:
               3-159
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-170
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               92, 154
               

               Conread position:
               3-173
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               95, 55
               

               Conread position:
               3-173
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               92, 113
               

               Conread position:
               3-274
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               189, 68
               

               Conread position:
               3-573
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 213
               

               Conread position:
               4-160
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               4-211
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               91, 22
               

               Conread position:
               10-159
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               11-158
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               37-193
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               44-575
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 112
               

               Conread position:
               131-538
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 39
               

               Conread position:
               260-561
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               123, 187
               

               Conread position:
               287-586
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               109, 76
               

               Conread position:
               348-578
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               367-597
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               154, 64
               

               Conread position:
               373-564
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               140, 48
               
Show alignments to all cow chromosomes.