Cow genome map


           Conread name:
           Thy1-THY010102A12
        

               Conread position:
               1-119
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               1-156
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               94, 79
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               16, 163
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 15
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               97, 134
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               89, 28
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               94, 135
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               94, 178
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               94, 130
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               94, 203
               

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 25
               

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               65, 198
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 17
               

               Conread position:
               1-445
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 41
               

               Conread position:
               2-192
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               2-198
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               2-266
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               96, 51
               

               Conread position:
               3-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-173
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               95, 30
               

               Conread position:
               3-173
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               3-187
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 120
               

               Conread position:
               3-220
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 26
               

               Conread position:
               4-172
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               49, 69
               

               Conread position:
               8-159
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               9-159
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               11-130
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               11-262
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               11-412
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 105
               

               Conread position:
               16-173
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               74, 32
               

               Conread position:
               31-195
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               38-143
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               38-211
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               48-173
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               260-562
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               284-549
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               287-536
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 62
               

               Conread position:
               290-586
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               228, 146
               

               Conread position:
               291-594
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               307-584
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               15, 121
               

               Conread position:
               314-594
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               316-566
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               138, 94
               

               Conread position:
               352-597
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 126
               

               Conread position:
               374-562
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 29
               
Show alignments to all cow chromosomes.