Cow genome map


           Conread name:
           Thy1-THY010102A12
        

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 140
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               89, 25
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               16, 62
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 128
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               93, 129
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 131
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               94, 75
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               161
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               94, 201
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 200
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               94, 203
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 206
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 79
               

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 122
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               88, 106
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               94, 165
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 41
               

               Conread position:
               1-568
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               1-594
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 297
               

               Conread position:
               2-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               96, 52
               

               Conread position:
               2-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               3-173
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-196
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               92, 148
               

               Conread position:
               8-173
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               9-159
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               10-159
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               10-262
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               175, 70
               

               Conread position:
               11-193
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               13, 104
               

               Conread position:
               11-351
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 154
               

               Conread position:
               27-202
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               32-173
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               46-174
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               287-507
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               217, 43
               

               Conread position:
               364-548
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               364-597
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               216, 110
               

               Conread position:
               373-501
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               375-577
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               382-528
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               433-587
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               75, 41
               
Show alignments to all cow chromosomes.