Cow genome map


           Conread name:
           Thy1-THY010102A12
        

               Conread position:
               1-127
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               97, 58
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 96
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               160, 76
               

               Conread position:
               1-168
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               147
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 159
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               94, 37
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               94, 24
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 203
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               94, 203
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 56
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 111
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               2-158
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               2-158
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               2-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 53
               

               Conread position:
               2-166
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               2-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               93, 147
               

               Conread position:
               2-202
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               93, 166
               

               Conread position:
               2-281
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               93, 62
               

               Conread position:
               2-594
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 353
               

               Conread position:
               3-581
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 36
               

               Conread position:
               9-191
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               86, 9
               

               Conread position:
               11-204
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               11-272
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               84, 128
               

               Conread position:
               26-568
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 111
               

               Conread position:
               30-594
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 161
               

               Conread position:
               38-594
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 235
               

               Conread position:
               54-172
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               100-568
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 174
               

               Conread position:
               109-523
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 54
               

               Conread position:
               143-517
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 188
               

               Conread position:
               143-522
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 348
               

               Conread position:
               220-594
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 224
               

               Conread position:
               261-583
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               261-591
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               270-487
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 122
               

               Conread position:
               314-584
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 135
               

               Conread position:
               356-594
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               153, 69
               

               Conread position:
               373-594
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               88, 109
               

               Conread position:
               373-594
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               399-594
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 50
               
Show alignments to all cow chromosomes.