Cow genome map

Conread name: Thy1-THY010102A12

Conread position: 1-113
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 1-126
Cow position:
Alignm length: 131
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 38

Conread position: 1-140
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-155
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 32

Conread position: 1-158
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 93

Conread position: 1-158
Cow position:
Alignm length: 162
Alignm identity: 130
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 89, 111

Conread position: 1-158
Cow position:
Alignm length: 162
Alignm identity: 133
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 85

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 1-159
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 1-159
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 7

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 34

Conread position: 1-159
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 67

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 97, 45

Conread position: 1-160
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 94, 84

Conread position: 1-160
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 75

Conread position: 1-166
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 1-167
Cow position:
Alignm length: 171
Alignm identity: 139
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 97, 53

Conread position: 1-167
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 97, 0

Conread position: 1-167
Cow position:
Alignm length: 171
Alignm identity: 137
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 1-169
Cow position:
Alignm length: 169
Alignm identity: 137
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1-169
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 142

Conread position: 1-172
Cow position:
Alignm length: 179
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 81

Conread position: 1-172
Cow position:
Alignm length: 176
Alignm identity: 138
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 94, 108

Conread position: 1-172
Cow position:
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 1-172
Cow position:
Alignm length: 176
Alignm identity: 138
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position:
Alignm length: 176
Alignm identity: 140
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position:
Alignm length: 179
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 91, 67

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position:
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 96, 0

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 143
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 141

Conread position: 1-173
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 47

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position:
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 96, 0

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 53

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 1-174
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 1-174
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 94, 38

Conread position: 1-174
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 1-174
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 1-174
Cow position:
Alignm length: 181
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 18

Conread position: 1-174
Cow position:
Alignm length: 179
Alignm identity: 146
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 89, 0

Conread position: 1-174
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 1-189
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-192
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 89, 41

Conread position: 1-192
Cow position:
Alignm length: 196
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 182

Conread position: 1-193
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 1-193
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 1-193
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 94, 37

Conread position: 1-193
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 0

Conread position: 1-193
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 93, 0

Conread position: 1-193
Cow position:
Alignm length: 199
Alignm identity: 154
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 95, 0

Conread position: 1-193
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 97, 0

Conread position: 1-195
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 32

Conread position: 1-195
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 18

Conread position: 1-202
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 97, 185

Conread position: 1-208
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 130

Conread position: 1-211
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 207

Conread position: 1-218
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 105, 17

Conread position: 1-226
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 173

Conread position: 1-236
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 1-239
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 152

Conread position: 1-247
Cow position:
Alignm length: 248
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 95

Conread position: 1-251
Cow position:
Alignm length: 260
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 164

Conread position: 1-262
Cow position:
Alignm length: 270
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 169

Conread position: 1-346
Cow position:
Alignm length: 358
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 164

Conread position: 1-364
Cow position:
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 326

Conread position: 1-491
Cow position:
Alignm length: 495
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 17

Conread position: 1-502
Cow position:
Alignm length: 509
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 13

Conread position: 1-545
Cow position:
Alignm length: 557
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 159

Conread position: 1-547
Cow position:
Alignm length: 556
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 30

Conread position: 1-547
Cow position:
Alignm length: 564
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 24

Conread position: 1-578
Cow position:
Alignm length: 587
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 225

Conread position: 1-594
Cow position:
Alignm length: 615
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 312

Conread position: 2-159
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 2-172
Cow position:
Alignm length: 175
Alignm identity: 141
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 93, 0

Conread position: 2-231
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 95, 162

Conread position: 2-239
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 92, 150

Conread position: 2-253
Cow position:
Alignm length: 255
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 199, 81

Conread position: 3-126
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 3-171
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 74

Conread position: 3-173
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 3-195
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 87, 0

Conread position: 3-208
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 92, 178

Conread position: 3-264
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 51

Conread position: 4-174
Cow position:
Alignm length: 177
Alignm identity: 145
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 91, 0

Conread position: 5-166
Cow position:
Alignm length: 168
Alignm identity: 133
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 8-173
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 10-193
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 19-172
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 20-240
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 29-584
Cow position:
Alignm length: 568
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 116

Conread position: 30-240
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 33-313
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 79

Conread position: 39-460
Cow position:
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 135

Conread position: 47-175
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 50-173
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 63-285
Cow position:
Alignm length: 229
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 10

Conread position: 94-346
Cow position:
Alignm length: 261
Alignm identity: 193
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 67, 46

Conread position: 96-290
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 105, 133

Conread position: 202-594
Cow position:
Alignm length: 395
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 53

Conread position: 217-549
Cow position:
Alignm length: 338
Alignm identity: 235
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 77, 35

Conread position: 260-584
Cow position:
Alignm length: 349
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 221

Conread position: 260-588
Cow position:
Alignm length: 334
Alignm identity: 223
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 118

Conread position: 260-594
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 73, 29

Conread position: 291-550
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 183, 0

Conread position: 292-582
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 25

Conread position: 299-589
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 57

Conread position: 339-528
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 165

Conread position: 343-559
Cow position:
Alignm length: 222
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 168, 80

Conread position: 343-578
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 69, 54

Conread position: 343-580
Cow position:
Alignm length: 240
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 190, 131

Conread position: 346-546
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 158, 5

Conread position: 355-594
Cow position:
Alignm length: 248
Alignm identity: 178
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 65, 95

Conread position: 356-555
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 358-564
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 358-594
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 86

Conread position: 358-595
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 43

Conread position: 380-561
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 43

Conread position: 399-594
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 78

Show alignments to all cow chromosomes.