Cow genome map
| Conread name: | Thy1-THY010102A12 |
| Conread position: | 1-155 |
| Cow position: | chr20:15292153-15292311 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-158 |
| Cow position: | chr20:21914470-21914631 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 32, 109 |
| Conread position: | 1-158 |
| Cow position: | chr20:35119713-35119873 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 94, 140 |
| Conread position: | 1-159 |
| Cow position: | chr20:5535080-5535242 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr20:8004083-8003921 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr20:13763046-13763209 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-159 |
| Cow position: | chr20:15097735-15097572 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 1-159 |
| Cow position: | chr20:23469516-23469361 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 94, 43 |
| Conread position: | 1-159 |
| Cow position: | chr20:25850848-25850686 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-159 |
| Cow position: | chr20:27869340-27869502 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-159 |
| Cow position: | chr20:28565453-28565291 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-166 |
| Cow position: | chr20:7116326-7116157 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-170 |
| Cow position: | chr20:15947235-15947064 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 1-171 |
| Cow position: | chr20:3033204-3033379 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-172 |
| Cow position: | chr20:5560572-5560397 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-172 |
| Cow position: | chr20:25961246-25961421 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-173 |
| Cow position: | chr20:10845979-10845803 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-174 |
| Cow position: | chr20:822910-823091 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-174 |
| Cow position: | chr20:3684345-3684168 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 147 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-180 |
| Cow position: | chr20:12438618-12438435 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-192 |
| Cow position: | chr20:3270847-3271047 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 84 |
| Conread position: | 1-194 |
| Cow position: | chr20:8313297-8313096 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-195 |
| Cow position: | chr20:3251991-3251791 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 97, 72 |
| Conread position: | 1-195 |
| Cow position: | chr20:5484332-5484535 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-198 |
| Cow position: | chr20:19438092-19438289 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 160, 15 |
| Conread position: | 1-202 |
| Cow position: | chr20:13679915-13679706 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-225 |
| Cow position: | chr20:9953842-9953617 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 2-155 |
| Cow position: | chr20:29948643-29948800 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-173 |
| Cow position: | chr20:8993501-8993331 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 87, 131 |
| Conread position: | 3-160 |
| Cow position: | chr20:24614679-24614841 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 4-193 |
| Cow position: | chr20:21393738-21393934 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 8-240 |
| Cow position: | chr20:31378735-31378502 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 90, 10 |
| Conread position: | 9-159 |
| Cow position: | chr20:28160922-28161075 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 10-159 |
| Cow position: | chr20:23799038-23799190 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 115 |
| Conread position: | 37-582 |
| Cow position: | chr20:18315430-18314910 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 45-173 |
| Cow position: | chr20:19495170-19495304 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 237-568 |
| Cow position: | chr20:8215556-8215889 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 170 |
| Conread position: | 268-524 |
| Cow position: | chr20:22207038-22207283 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.