Cow genome map


           Conread name:
           Thy1-THY010102A12
        

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 57
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               94, 69
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               89, 80
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 75
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 145
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               94, 80
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               94, 80
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               174, 32
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               93, 84
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               94, 203
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               94, 204
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 167
               

               Conread position:
               1-562
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 53
               

               Conread position:
               1-578
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               2-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               2-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               93, 14
               

               Conread position:
               2-194
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 141
               

               Conread position:
               2-299
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               87, 37
               

               Conread position:
               2-370
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 163
               

               Conread position:
               2-578
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 358
               

               Conread position:
               3-159
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               95, 5
               

               Conread position:
               3-195
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               3-240
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 183
               

               Conread position:
               9-155
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               9-158
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               15-557
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 183
               

               Conread position:
               17-594
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 122
               

               Conread position:
               18-159
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 50
               

               Conread position:
               32-166
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               75-497
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 257
               

               Conread position:
               260-547
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               268-587
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               309, 18
               

               Conread position:
               272-594
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               358-584
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               73, 118
               

               Conread position:
               364-584
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               98, 14
               

               Conread position:
               364-587
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               156, 69
               

               Conread position:
               406-594
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               112, 23
               
Show alignments to all cow chromosomes.