Cow genome map

Conread name: Thy1-THY010102A12

Conread position: 1-122
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 94, 75

Conread position: 1-138
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 1-145
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 38

Conread position: 1-146
Cow position:
Alignm length: 150
Alignm identity: 123
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 40

Conread position: 1-150
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 36

Conread position: 1-154
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 41

Conread position: 1-155
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 94, 145

Conread position: 1-155
Cow position:
Alignm length: 159
Alignm identity: 128
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 145

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 94, 79

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 94, 128

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 131
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 1-160
Cow position:
Alignm length: 164
Alignm identity: 136
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 94, 0

Conread position: 1-166
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 1-167
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 70

Conread position: 1-173
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 1-173
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 16, 49

Conread position: 1-173
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 81

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 141
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 89, 0

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 1-174
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 1-174
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 97, 0

Conread position: 1-174
Cow position:
Alignm length: 180
Alignm identity: 146
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 94, 0

Conread position: 1-175
Cow position:
Alignm length: 182
Alignm identity: 145
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 1-187
Cow position:
Alignm length: 198
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 1-193
Cow position:
Alignm length: 204
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 85, 57

Conread position: 1-202
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 97, 203

Conread position: 1-208
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 180, 40

Conread position: 1-211
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 94, 203

Conread position: 1-211
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 89, 203

Conread position: 1-211
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 97, 201

Conread position: 1-211
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 203

Conread position: 1-211
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 94, 201

Conread position: 1-225
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 17

Conread position: 1-253
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 97, 154

Conread position: 1-260
Cow position:
Alignm length: 263
Alignm identity: 178
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 44

Conread position: 1-274
Cow position:
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 1-283
Cow position:
Alignm length: 289
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 1-381
Cow position:
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 167

Conread position: 1-569
Cow position:
Alignm length: 581
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 222

Conread position: 1-594
Cow position:
Alignm length: 610
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 125

Conread position: 1-594
Cow position:
Alignm length: 608
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 423

Conread position: 2-114
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 16

Conread position: 2-159
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 2-159
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 2-187
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 2-193
Cow position:
Alignm length: 201
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 93, 0

Conread position: 3-139
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 92, 15

Conread position: 3-167
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 0

Conread position: 3-193
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 13

Conread position: 3-241
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 152

Conread position: 3-578
Cow position:
Alignm length: 583
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 35

Conread position: 3-594
Cow position:
Alignm length: 603
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 14

Conread position: 5-208
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 0

Conread position: 6-241
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 120

Conread position: 8-338
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 14

Conread position: 11-174
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 19-172
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 20-173
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 30-159
Cow position:
Alignm length: 134
Alignm identity: 110
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 15

Conread position: 39-594
Cow position:
Alignm length: 576
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 164-584
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 85

Conread position: 172-388
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 68, 116

Conread position: 172-513
Cow position:
Alignm length: 348
Alignm identity: 246
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 69, 182

Conread position: 232-594
Cow position:
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 36

Conread position: 284-578
Cow position:
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 157

Conread position: 291-557
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 80, 45

Conread position: 316-597
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 136, 0

Conread position: 357-584
Cow position:
Alignm length: 235
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 100

Conread position: 358-594
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 146, 61

Conread position: 382-578
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 0

Show alignments to all cow chromosomes.