Cow genome map
| Conread name: | Thy1-THY010102A12 |
| Conread position: | 1-130 |
| Cow position: | chr23:2524108-2523975 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-146 |
| Cow position: | chr23:20156128-20155977 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-155 |
| Cow position: | chr23:2757683-2757841 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr23:2716477-2716639 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-159 |
| Cow position: | chr23:2795476-2795317 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 123 |
| Conread position: | 1-159 |
| Cow position: | chr23:3881616-3881454 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr23:4359919-4360081 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr23:4640535-4640373 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr23:4888764-4888924 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 1-159 |
| Cow position: | chr23:16616760-16616595 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-159 |
| Cow position: | chr23:19489631-19489793 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr23:20302302-20302463 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 94, 139 |
| Conread position: | 1-159 |
| Cow position: | chr23:22147161-22147003 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 97, 137 |
| Conread position: | 1-159 |
| Cow position: | chr23:30636213-30636050 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1-172 |
| Cow position: | chr23:27399593-27399766 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 162 |
| Conread position: | 1-172 |
| Cow position: | chr23:31446904-31447079 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-173 |
| Cow position: | chr23:988557-988383 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 39 |
| Conread position: | 1-173 |
| Cow position: | chr23:2765364-2765188 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-173 |
| Cow position: | chr23:4277044-4277220 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-173 |
| Cow position: | chr23:4510166-4510342 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 1-173 |
| Cow position: | chr23:15525699-15525875 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-173 |
| Cow position: | chr23:28913486-28913660 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 94, 63 |
| Conread position: | 1-173 |
| Cow position: | chr23:31591714-31591537 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-173 |
| Cow position: | chr23:36031284-36031107 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-174 |
| Cow position: | chr23:7273719-7273897 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-180 |
| Cow position: | chr23:25683972-25683792 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 94, 70 |
| Conread position: | 1-193 |
| Cow position: | chr23:29452231-29452030 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-194 |
| Cow position: | chr23:4434548-4434744 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-195 |
| Cow position: | chr23:5778998-5778797 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-196 |
| Cow position: | chr23:14965663-14965464 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-201 |
| Cow position: | chr23:2313149-2312940 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 1-208 |
| Cow position: | chr23:2574625-2574842 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 94, 85 |
| Conread position: | 1-211 |
| Cow position: | chr23:19950494-19950279 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 94, 186 |
| Conread position: | 1-211 |
| Cow position: | chr23:28217379-28217597 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 94, 203 |
| Conread position: | 1-238 |
| Cow position: | chr23:15219803-15219563 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 16, 217 |
| Conread position: | 1-240 |
| Cow position: | chr23:19332318-19332080 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 45 |
| Conread position: | 1-269 |
| Cow position: | chr23:22875584-22875323 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 1-278 |
| Cow position: | chr23:1327385-1327102 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 108 |
| Conread position: | 1-364 |
| Cow position: | chr23:29474468-29474098 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 31 |
| Conread position: | 2-239 |
| Cow position: | chr23:8980230-8979992 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 3-126 |
| Cow position: | chr23:5874683-5874564 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 3-155 |
| Cow position: | chr23:2027028-2026872 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 3-253 |
| Cow position: | chr23:16615905-16615652 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 19, 55 |
| Conread position: | 3-262 |
| Cow position: | chr23:38578366-38578631 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 111 |
| Conread position: | 5-198 |
| Cow position: | chr23:31595143-31594943 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 157 |
| Conread position: | 6-159 |
| Cow position: | chr23:967256-967099 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 8-208 |
| Cow position: | chr23:14974468-14974263 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 15, 195 |
| Conread position: | 32-262 |
| Cow position: | chr23:31650790-31650559 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 119, 54 |
| Conread position: | 74-317 |
| Cow position: | chr23:1402719-1402471 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 195 |
| Conread position: | 302-594 |
| Cow position: | chr23:16615363-16615080 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 359-542 |
| Cow position: | chr23:1402366-1402192 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 153, 29 |
| Conread position: | 375-594 |
| Cow position: | chr23:7046518-7046303 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 140, 31 |
| Conread position: | 386-594 |
| Cow position: | chr23:2341240-2341445 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 399-594 |
| Cow position: | chr23:9545743-9545936 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 129, 34 |
| Conread position: | 399-594 |
| Cow position: | chr23:15877598-15877410 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 25 |
Show alignments to all cow chromosomes.