Cow genome map
| Conread name: | Thy1-THY010102A12 |
| Conread position: | 1-119 |
| Cow position: | chr25:18027494-18027372 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-134 |
| Cow position: | chr25:20629702-20629834 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-155 |
| Cow position: | chr25:22147626-22147784 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-158 |
| Cow position: | chr25:20776767-20776610 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 1-158 |
| Cow position: | chr25:26922348-26922508 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 141 |
| Conread position: | 1-159 |
| Cow position: | chr25:13781161-13781323 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-159 |
| Cow position: | chr25:18889885-18889722 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-159 |
| Cow position: | chr25:26279388-26279552 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-159 |
| Cow position: | chr25:32580097-32580258 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 94, 84 |
| Conread position: | 1-166 |
| Cow position: | chr25:27022435-27022265 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-172 |
| Cow position: | chr25:34346886-34346711 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-173 |
| Cow position: | chr25:8675047-8675223 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-173 |
| Cow position: | chr25:17468567-17468395 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 80, 97 |
| Conread position: | 1-173 |
| Cow position: | chr25:18060469-18060295 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 1-173 |
| Cow position: | chr25:18275702-18275521 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-173 |
| Cow position: | chr25:18303532-18303707 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 19 |
| Conread position: | 1-173 |
| Cow position: | chr25:25506781-25506958 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 95, 45 |
| Conread position: | 1-173 |
| Cow position: | chr25:34656315-34656139 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-174 |
| Cow position: | chr25:18194967-18194786 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-174 |
| Cow position: | chr25:19917215-19917396 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-189 |
| Cow position: | chr25:33665742-33665552 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 1-193 |
| Cow position: | chr25:9544194-9544394 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 94, 52 |
| Conread position: | 1-195 |
| Cow position: | chr25:11375217-11375017 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-197 |
| Cow position: | chr25:36240687-36240879 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-262 |
| Cow position: | chr25:11933399-11933132 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-304 |
| Cow position: | chr25:14016296-14016610 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 2-159 |
| Cow position: | chr25:12942568-12942407 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 2-172 |
| Cow position: | chr25:35362297-35362123 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 2-240 |
| Cow position: | chr25:18255234-18254994 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 166, 27 |
| Conread position: | 2-250 |
| Cow position: | chr25:12759467-12759214 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 112 |
| Conread position: | 4-174 |
| Cow position: | chr25:17589420-17589242 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 11-262 |
| Cow position: | chr25:18093151-18093407 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 26-172 |
| Cow position: | chr25:6172059-6172209 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 30-192 |
| Cow position: | chr25:17560472-17560309 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 126 |
| Conread position: | 260-597 |
| Cow position: | chr25:11933048-11932701 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 357-594 |
| Cow position: | chr25:18094366-18094599 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 223, 97 |
| Conread position: | 433-594 |
| Cow position: | chr25:33665441-33665281 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 13 |
Show alignments to all cow chromosomes.