Cow genome map


           Conread name:
           Thy1-THY010102A12
        

               Conread position:
               1-96
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-96
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               88, 146
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               97, 54
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               97, 79
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               94, 15
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               97, 54
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               94, 124
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               94, 37
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               89, 136
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               93, 116
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               94, 113
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-175
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               97, 15
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               94, 203
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               151, 30
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 106
               

               Conread position:
               1-247
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 24
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 137
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               95, 162
               

               Conread position:
               2-145
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               87, 16
               

               Conread position:
               2-145
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               3-159
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               3-173
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-173
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               92, 196
               

               Conread position:
               8-172
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               8-240
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               26-257
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               189, 54
               

               Conread position:
               38-594
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 41
               

               Conread position:
               41-367
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               45-159
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               93-306
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               185-332
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 113
               

               Conread position:
               292-584
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               316-549
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               100, 79
               

               Conread position:
               358-528
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               150, 116
               

               Conread position:
               364-594
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               125, 65
               
Show alignments to all cow chromosomes.