Cow genome map

Conread name: Thy1-THY010102A12

Conread position: 1-95
Cow position: chr4:528815-528909 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-119
Cow position: chr4:4905968-4906090 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 1-153
Cow position: chr4:3961413-3961569 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 1-155
Cow position: chr4:33073288-33073130 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 34

Conread position: 1-155
Cow position: chr4:41119835-41119993 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 1-158
Cow position: chr4:48026219-48026379 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 1-159
Cow position: chr4:101111-100949 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr4:4415904-4416066 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 1-159
Cow position: chr4:6490543-6490381 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr4:12587120-12587282 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr4:17926433-17926271 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 1-159
Cow position: chr4:24445379-24445223 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 0

Conread position: 1-159
Cow position: chr4:25599797-25599635 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr4:26887041-26886881 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 112

Conread position: 1-159
Cow position: chr4:32211989-32212151 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr4:43319824-43319663 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 97, 79

Conread position: 1-159
Cow position: chr4:44724905-44725067 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 1-159
Cow position: chr4:45049476-45049315 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 1-159
Cow position: chr4:47717784-47717623 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 30

Conread position: 1-159
Cow position: chr4:47764348-47764187 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 97, 54

Conread position: 1-159
Cow position: chr4:57979450-57979611 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 1-166
Cow position: chr4:158337-158507 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 1-166
Cow position: chr4:16056423-16056593 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 1-172
Cow position: chr4:602815-602990 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position: chr4:9354949-9354774 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position: chr4:9587085-9587260 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position: chr4:13547851-13548026 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position: chr4:65223712-65223537 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 1-173
Cow position: chr4:10408499-10408671 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 33

Conread position: 1-173
Cow position: chr4:11618675-11618848 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 89, 137

Conread position: 1-173
Cow position: chr4:18516718-18516894 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 1-174
Cow position: chr4:1930802-1930621 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 1-174
Cow position: chr4:6268806-6268629 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 1-174
Cow position: chr4:12241396-12241219 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 1-174
Cow position: chr4:30307637-30307456 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 96, 0

Conread position: 1-187
Cow position: chr4:16359705-16359900 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 1-193
Cow position: chr4:66925821-66926019 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 96, 58

Conread position: 1-195
Cow position: chr4:66179166-66178968 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 94, 0

Conread position: 1-202
Cow position: chr4:13492398-13492597 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 97, 47

Conread position: 1-208
Cow position: chr4:26749065-26748866 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 197, 79

Conread position: 1-208
Cow position: chr4:51044107-51043899 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 39

Conread position: 1-211
Cow position: chr4:5879987-5880205 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 94, 203

Conread position: 1-211
Cow position: chr4:18424703-18424485 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 94, 203

Conread position: 1-262
Cow position: chr4:8598335-8598070 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 94, 111

Conread position: 1-362
Cow position: chr4:60264746-60264376 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 331

Conread position: 1-364
Cow position: chr4:34185049-34184712 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 25

Conread position: 1-392
Cow position: chr4:21338182-21337785 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 197

Conread position: 1-535
Cow position: chr4:1464103-1463573 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 85

Conread position: 2-124
Cow position: chr4:39272114-39271988 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 2-159
Cow position: chr4:41331260-41331422 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 2-159
Cow position: chr4:43880932-43881092 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 16

Conread position: 2-174
Cow position: chr4:3125618-3125798 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 2-240
Cow position: chr4:11384782-11385020 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 96, 78

Conread position: 2-594
Cow position: chr4:28830852-28831429 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 156

Conread position: 3-155
Cow position: chr4:355734-355889 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 95, 36

Conread position: 3-159
Cow position: chr4:31565481-31565320 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 3-173
Cow position: chr4:61256720-61256889 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 35

Conread position: 11-159
Cow position: chr4:27333267-27333419 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 11-240
Cow position: chr4:17530598-17530367 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 123

Conread position: 13-174
Cow position: chr4:41954307-41954477 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 15-250
Cow position: chr4:11393510-11393269 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 29-174
Cow position: chr4:41957979-41958132 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 29-211
Cow position: chr4:18190256-18190445 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 49

Conread position: 29-594
Cow position: chr4:46664042-46664605 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 17

Conread position: 31-198
Cow position: chr4:33493677-33493847 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 32-172
Cow position: chr4:31669122-31669268 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 144-367
Cow position: chr4:54955717-54955941 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 208

Conread position: 191-549
Cow position: chr4:14549679-14550032 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 73, 21

Conread position: 287-488
Cow position: chr4:14821999-14821801 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 49

Conread position: 374-594
Cow position: chr4:34184638-34184431 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 131, 41

Conread position: 391-594
Cow position: chr4:51043371-51043164 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 89

Show alignments to all cow chromosomes.