Cow genome map

Conread name: Thy1-THY010102A12

Conread position: 1-126
Cow position: chr7:36085484-36085612 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 118

Conread position: 1-126
Cow position: chr7:41869798-41869668 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 1-146
Cow position: chr7:54602999-54603148 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 1-151
Cow position: chr7:1357538-1357384 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 96, 0

Conread position: 1-153
Cow position: chr7:20555862-20556018 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 1-155
Cow position: chr7:45949002-45948846 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 1-158
Cow position: chr7:24808319-24808158 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 11, 18

Conread position: 1-158
Cow position: chr7:34486061-34486223 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 1-159
Cow position: chr7:1372504-1372342 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr7:6642729-6642567 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr7:7257343-7257503 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 106

Conread position: 1-159
Cow position: chr7:8145096-8144934 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 1-159
Cow position: chr7:13537435-13537274 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 79

Conread position: 1-159
Cow position: chr7:14139453-14139291 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 1-159
Cow position: chr7:20799294-20799136 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1-159
Cow position: chr7:21127514-21127353 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 95, 74

Conread position: 1-159
Cow position: chr7:21234863-21234702 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 23

Conread position: 1-159
Cow position: chr7:21985547-21985709 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 1-159
Cow position: chr7:33406094-33405932 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 42

Conread position: 1-159
Cow position: chr7:34149246-34149408 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 1-159
Cow position: chr7:39791903-39792065 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr7:46901932-46901771 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 1-159
Cow position: chr7:55537769-55537608 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 94, 115

Conread position: 1-159
Cow position: chr7:60463297-60463459 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 134
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-166
Cow position: chr7:1449632-1449800 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 1-172
Cow position: chr7:16724-16549 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position: chr7:21320304-21320479 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position: chr7:23815822-23815647 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 56

Conread position: 1-172
Cow position: chr7:43830877-43830702 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position: chr7:61559361-61559536 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position: chr7:21975589-21975423 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 97, 45

Conread position: 1-173
Cow position: chr7:41490259-41490433 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 94, 80

Conread position: 1-173
Cow position: chr7:67417192-67417366 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 140

Conread position: 1-173
Cow position: chr7:68232088-68232264 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 1-174
Cow position: chr7:3301006-3300829 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 146
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 95, 0

Conread position: 1-174
Cow position: chr7:6648507-6648327 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 94, 148

Conread position: 1-174
Cow position: chr7:11446703-11446885 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 1-174
Cow position: chr7:11466590-11466410 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 55

Conread position: 1-174
Cow position: chr7:25439654-25439839 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 13, 18

Conread position: 1-174
Cow position: chr7:52119937-52119760 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 1-183
Cow position: chr7:68907978-68908161 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 93, 17

Conread position: 1-193
Cow position: chr7:1611063-1610865 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 96, 0

Conread position: 1-193
Cow position: chr7:3234535-3234334 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 1-193
Cow position: chr7:27101966-27101771 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 179

Conread position: 1-194
Cow position: chr7:27786771-27786971 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 80

Conread position: 1-208
Cow position: chr7:64241800-64241589 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 204

Conread position: 1-239
Cow position: chr7:59136556-59136789 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-250
Cow position: chr7:21310353-21310606 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 238

Conread position: 1-256
Cow position: chr7:63550542-63550294 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 199, 24

Conread position: 1-262
Cow position: chr7:1400212-1399949 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 11, 18

Conread position: 1-262
Cow position: chr7:6489171-6488923 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 200, 79

Conread position: 1-262
Cow position: chr7:47050830-47051098 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-262
Cow position: chr7:55280655-55280390 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 97, 55

Conread position: 1-285
Cow position: chr7:35287412-35287122 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 33

Conread position: 1-539
Cow position: chr7:29370435-29369918 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 78

Conread position: 1-564
Cow position: chr7:29470271-29470849 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 36

Conread position: 1-577
Cow position: chr7:39108092-39107522 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 223

Conread position: 1-584
Cow position: chr7:3154914-3155521 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 77

Conread position: 1-584
Cow position: chr7:51014103-51014673 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 22

Conread position: 2-159
Cow position: chr7:10431269-10431108 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 2-159
Cow position: chr7:20515623-20515462 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 2-159
Cow position: chr7:20528526-20528365 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 2-160
Cow position: chr7:48633529-48633690 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 96, 41

Conread position: 2-173
Cow position: chr7:446482-446307 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 93, 161

Conread position: 2-173
Cow position: chr7:5183554-5183729 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 2-173
Cow position: chr7:35297122-35296944 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 2-173
Cow position: chr7:63385489-63385664 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 2-211
Cow position: chr7:68479316-68479532 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 0

Conread position: 2-240
Cow position: chr7:39555947-39555705 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 93, 172

Conread position: 2-240
Cow position: chr7:49290809-49291053 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 2-240
Cow position: chr7:58993342-58993581 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 163

Conread position: 2-240
Cow position: chr7:68478592-68478834 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 16

Conread position: 2-243
Cow position: chr7:52804562-52804326 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 87

Conread position: 2-248
Cow position: chr7:27540215-27539965 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 209

Conread position: 2-562
Cow position: chr7:53990901-53991442 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 218

Conread position: 3-158
Cow position: chr7:994385-994539 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 34

Conread position: 3-159
Cow position: chr7:67799001-67799161 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 3-173
Cow position: chr7:5662524-5662697 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 88, 107

Conread position: 3-208
Cow position: chr7:68857964-68857754 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 3-262
Cow position: chr7:63020998-63021254 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 95, 70

Conread position: 3-349
Cow position: chr7:24934814-24934465 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 34

Conread position: 3-359
Cow position: chr7:68778003-68777650 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 69

Conread position: 20-140
Cow position: chr7:33878204-33878080 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 26-173
Cow position: chr7:21929317-21929466 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 22

Conread position: 32-193
Cow position: chr7:27147429-27147594 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 67, 14

Conread position: 39-370
Cow position: chr7:54196071-54195742 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 236

Conread position: 232-547
Cow position: chr7:23836598-23836909 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 10

Conread position: 272-587
Cow position: chr7:63550212-63549902 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 163, 65

Conread position: 287-569
Cow position: chr7:67426459-67426730 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 258, 70

Conread position: 287-569
Cow position: chr7:68908430-68908705 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 290-558
Cow position: chr7:21310610-21310876 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 64

Conread position: 292-587
Cow position: chr7:4415485-4415783 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 183

Conread position: 298-579
Cow position: chr7:58377646-58377361 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 19

Conread position: 346-568
Cow position: chr7:6488288-6488079 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 356-517
Cow position: chr7:24056902-24057057 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 364-575
Cow position: chr7:48634625-48634833 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 53

Conread position: 366-564
Cow position: chr7:1734603-1734398 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 71, 111

Conread position: 373-568
Cow position: chr7:54644312-54644126 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 382-569
Cow position: chr7:60460532-60460343 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 111, 51

Conread position: 383-569
Cow position: chr7:59137046-59137226 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 92

Conread position: 432-592
Cow position: chr7:59683536-59683689 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 148, 47

Show alignments to all cow chromosomes.