Cow genome map

Conread name: Thy1-THY010102A12

Conread position: 1-130
Cow position: chr8:8910556-8910689 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 1-130
Cow position: chr8:14928658-14928525 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 1-143
Cow position: chr8:9540158-9540015 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 53

Conread position: 1-146
Cow position: chr8:42759279-42759428 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 1-154
Cow position: chr8:38390703-38390860 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-155
Cow position: chr8:5016516-5016674 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 1-155
Cow position: chr8:24916002-24915844 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 1-158
Cow position: chr8:34348014-34348174 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 94, 47

Conread position: 1-159
Cow position: chr8:1153972-1153810 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr8:3856679-3856519 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 97, 134

Conread position: 1-159
Cow position: chr8:6065433-6065271 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr8:8556813-8556651 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr8:10743295-10743133 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 1-159
Cow position: chr8:12449283-12449445 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr8:14591567-14591405 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr8:25522736-25522896 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 89, 145

Conread position: 1-159
Cow position: chr8:27578737-27578899 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr8:32319214-32319052 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr8:32631690-32631530 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 15

Conread position: 1-159
Cow position: chr8:33588709-33588871 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr8:39195881-39195720 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 1-159
Cow position: chr8:42484247-42484409 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 56

Conread position: 1-159
Cow position: chr8:44244238-44244076 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr8:47661991-47661828 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 1-159
Cow position: chr8:49214762-49214924 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr8:50288816-50288654 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 1-159
Cow position: chr8:50994123-50994285 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 1-166
Cow position: chr8:11821648-11821817 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 142
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 93, 124

Conread position: 1-168
Cow position: chr8:21158483-21158312 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position: chr8:9275346-9275521 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position: chr8:17311352-17311528 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 1-173
Cow position: chr8:2171044-2170868 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 56

Conread position: 1-173
Cow position: chr8:8229446-8229270 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 1-173
Cow position: chr8:19050811-19050989 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 140

Conread position: 1-173
Cow position: chr8:23217095-23217271 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 97, 0

Conread position: 1-173
Cow position: chr8:25776338-25776162 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 1-173
Cow position: chr8:32930845-32931021 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 145
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 89, 0

Conread position: 1-173
Cow position: chr8:59262558-59262382 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 94, 162

Conread position: 1-174
Cow position: chr8:8518247-8518067 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 45

Conread position: 1-174
Cow position: chr8:26005262-26005080 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 42

Conread position: 1-175
Cow position: chr8:1319380-1319562 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 0

Conread position: 1-180
Cow position: chr8:23770970-23771153 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 1-192
Cow position: chr8:11832033-11832230 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 1-193
Cow position: chr8:27983460-27983266 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 1-193
Cow position: chr8:45316790-45316588 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 1-193
Cow position: chr8:47670795-47670983 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 161, 95

Conread position: 1-196
Cow position: chr8:3785045-3785244 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 1-196
Cow position: chr8:36636207-36636010 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 97, 28

Conread position: 1-196
Cow position: chr8:45448793-45448993 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 17

Conread position: 1-202
Cow position: chr8:4686728-4686928 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 163

Conread position: 1-202
Cow position: chr8:27925650-27925859 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 94, 0

Conread position: 1-202
Cow position: chr8:45189419-45189624 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 94, 0

Conread position: 1-208
Cow position: chr8:2886086-2886306 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 1-240
Cow position: chr8:13808936-13809180 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 130, 93

Conread position: 1-243
Cow position: chr8:11761615-11761865 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 39

Conread position: 1-246
Cow position: chr8:42467660-42467906 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 97, 123

Conread position: 1-262
Cow position: chr8:12543706-12543453 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 159, 37

Conread position: 1-262
Cow position: chr8:25542837-25543103 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 123

Conread position: 1-566
Cow position: chr8:61035033-61034443 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 357

Conread position: 1-587
Cow position: chr8:11970256-11969685 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 163

Conread position: 1-594
Cow position: chr8:38607189-38606596 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 64

Conread position: 1-594
Cow position: chr8:42161391-42160812 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 87

Conread position: 2-159
Cow position: chr8:10748711-10748872 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 93, 0

Conread position: 2-172
Cow position: chr8:8655882-8655708 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 93, 0

Conread position: 2-174
Cow position: chr8:22571960-22571779 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 2-192
Cow position: chr8:51667961-51667763 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 2-211
Cow position: chr8:9735583-9735800 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 93, 205

Conread position: 2-240
Cow position: chr8:23766062-23765828 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 92, 77

Conread position: 2-240
Cow position: chr8:47491496-47491252 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 2-252
Cow position: chr8:8533287-8533032 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 16

Conread position: 2-262
Cow position: chr8:45693292-45693024 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 96, 5

Conread position: 2-521
Cow position: chr8:45161039-45160521 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 270

Conread position: 3-159
Cow position: chr8:47069469-47069308 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 3-169
Cow position: chr8:50934438-50934608 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 3-172
Cow position: chr8:47074606-47074778 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 92, 43

Conread position: 3-173
Cow position: chr8:46944583-46944408 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 3-235
Cow position: chr8:20276758-20276990 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 188, 77

Conread position: 3-446
Cow position: chr8:33430260-33430712 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 163

Conread position: 3-500
Cow position: chr8:16083665-16084189 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 81

Conread position: 4-133
Cow position: chr8:61066908-61066775 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 4-594
Cow position: chr8:24420194-24419604 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 14

Conread position: 6-173
Cow position: chr8:44036439-44036267 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 7-173
Cow position: chr8:46600635-46600805 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 9-158
Cow position: chr8:19330079-19330232 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 9-563
Cow position: chr8:44693630-44694165 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 11-173
Cow position: chr8:30488157-30487992 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 18-262
Cow position: chr8:47672823-47673072 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 19-160
Cow position: chr8:42420212-42420066 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 23-499
Cow position: chr8:58187142-58186690 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 75

Conread position: 26-172
Cow position: chr8:45797955-45797805 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 31-562
Cow position: chr8:44076522-44075993 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 137

Conread position: 32-172
Cow position: chr8:1348869-1348725 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 261-572
Cow position: chr8:47490935-47490614 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 206
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 160

Conread position: 287-596
Cow position: chr8:42468040-42468340 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 78, 61

Conread position: 358-596
Cow position: chr8:47673533-47673760 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 222, 60

Conread position: 381-581
Cow position: chr8:45216179-45216380 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 38

Conread position: 381-594
Cow position: chr8:47081237-47081453 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 33

Show alignments to all cow chromosomes.