Cow genome map


           Conread name:
           Thy1-THY010102A12
        

               Conread position:
               1-118
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               95, 84
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               51, 58
               

               Conread position:
               1-155
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               97, 79
               

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               94, 145
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               97, 23
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               95, 51
               

               Conread position:
               1-170
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               51, 57
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               94, 75
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               97, 41
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               97, 51
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               94, 15
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               97, 37
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               94, 133
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               186, 79
               

               Conread position:
               1-251
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               53, 99
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               89, 241
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               89, 198
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               92, 111
               

               Conread position:
               1-568
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 431
               

               Conread position:
               1-578
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               2-171
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               2-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               93, 118
               

               Conread position:
               2-174
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               2-209
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               93, 79
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-172
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               92, 143
               

               Conread position:
               3-173
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               95, 43
               

               Conread position:
               3-195
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               89, 39
               

               Conread position:
               3-269
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 170
               

               Conread position:
               4-208
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               9-154
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               11-159
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               84, 7
               

               Conread position:
               11-173
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               11-208
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               12-154
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               16-175
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               76, 8
               

               Conread position:
               26-234
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               72, 115
               

               Conread position:
               39-240
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               94-262
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               107, 71
               

               Conread position:
               124-338
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               117, 39
               

               Conread position:
               136-290
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 88
               

               Conread position:
               260-594
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               288-565
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 67
               

               Conread position:
               288-594
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 197
               

               Conread position:
               292-581
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               142, 70
               

               Conread position:
               293-541
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               63, 184
               

               Conread position:
               316-587
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               51, 160
               

               Conread position:
               328-563
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               49, 149
               

               Conread position:
               339-573
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 109
               

               Conread position:
               347-594
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 80
               

               Conread position:
               361-594
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               44, 35
               

               Conread position:
               389-594
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               86, 43
               
Show alignments to all cow chromosomes.