Cow genome map
| Conread name: | Thy1-THY010112C06 |
| Conread position: | 133-424 |
| Cow position: | chr27:22035311-22035595 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 8 |
| Conread position: | 151-424 |
| Cow position: | chr27:21393463-21393717 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 151-424 |
| Cow position: | chr27:26509104-26509380 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 161-452 |
| Cow position: | chr27:23559992-23560281 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 193, 46 |
| Conread position: | 162-424 |
| Cow position: | chr27:26428088-26428352 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 162-457 |
| Cow position: | chr27:16284514-16284229 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 187-375 |
| Cow position: | chr27:6302451-6302635 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 191-384 |
| Cow position: | chr27:18558366-18558184 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 191-426 |
| Cow position: | chr27:6925096-6924856 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 163, 31 |
| Conread position: | 192-359 |
| Cow position: | chr27:27038832-27038989 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 192-422 |
| Cow position: | chr27:15865617-15865388 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 180, 35 |
| Conread position: | 192-424 |
| Cow position: | chr27:19660941-19660704 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 171, 20 |
| Conread position: | 194-424 |
| Cow position: | chr27:30456005-30455769 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 106 |
| Conread position: | 195-424 |
| Cow position: | chr27:26437114-26437344 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 167, 25 |
| Conread position: | 199-351 |
| Cow position: | chr27:715502-715357 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 201-469 |
| Cow position: | chr27:10979863-10979591 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 149, 11 |
| Conread position: | 202-424 |
| Cow position: | chr27:4944515-4944730 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 155, 28 |
| Conread position: | 204-375 |
| Cow position: | chr27:30359404-30359239 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 204-424 |
| Cow position: | chr27:17397456-17397675 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 157, 18 |
| Conread position: | 204-465 |
| Cow position: | chr27:1353582-1353317 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 163, 95 |
| Conread position: | 204-468 |
| Cow position: | chr27:22171296-22171036 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 164, 83 |
| Conread position: | 207-374 |
| Cow position: | chr27:31017834-31017992 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 207-453 |
| Cow position: | chr27:11982649-11982901 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 207-457 |
| Cow position: | chr27:7935160-7935416 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 154, 86 |
| Conread position: | 208-352 |
| Cow position: | chr27:18593264-18593128 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 208-421 |
| Cow position: | chr27:20037120-20037320 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 208-465 |
| Cow position: | chr27:426964-426706 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 209-372 |
| Cow position: | chr27:20085557-20085392 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 209-375 |
| Cow position: | chr27:27641019-27641178 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 209-378 |
| Cow position: | chr27:26413260-26413425 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 209-415 |
| Cow position: | chr27:29593635-29593846 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 152, 74 |
| Conread position: | 209-416 |
| Cow position: | chr27:1768628-1768838 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 209-424 |
| Cow position: | chr27:299387-299598 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 209-437 |
| Cow position: | chr27:17646174-17646396 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 211, 95 |
| Conread position: | 209-438 |
| Cow position: | chr27:23890932-23890695 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 145, 89 |
| Conread position: | 209-451 |
| Cow position: | chr27:20812899-20812659 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 199, 88 |
| Conread position: | 209-452 |
| Cow position: | chr27:6241200-6241450 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 168, 17 |
| Conread position: | 209-453 |
| Cow position: | chr27:15332301-15332541 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 210-369 |
| Cow position: | chr27:25277133-25276980 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 155, 71 |
| Conread position: | 210-374 |
| Cow position: | chr27:26581446-26581603 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 210-375 |
| Cow position: | chr27:1290858-1291020 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 154, 87 |
| Conread position: | 210-375 |
| Cow position: | chr27:22423508-22423347 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 155, 17 |
| Conread position: | 210-378 |
| Cow position: | chr27:27064448-27064610 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 210-387 |
| Cow position: | chr27:17918318-17918493 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 13, 88 |
| Conread position: | 210-424 |
| Cow position: | chr27:4858648-4858843 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 210-424 |
| Cow position: | chr27:15867388-15867169 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 210-424 |
| Cow position: | chr27:19933056-19932842 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 150, 33 |
| Conread position: | 210-426 |
| Cow position: | chr27:25152080-25151863 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 210-438 |
| Cow position: | chr27:28518293-28518052 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 8, 91 |
| Conread position: | 210-449 |
| Cow position: | chr27:2957398-2957168 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 210-449 |
| Cow position: | chr27:6541627-6541384 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 210-451 |
| Cow position: | chr27:14303731-14303488 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 210-454 |
| Cow position: | chr27:2592539-2592281 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 5, 92 |
| Conread position: | 210-454 |
| Cow position: | chr27:24303939-24303681 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 151, 32 |
| Conread position: | 210-454 |
| Cow position: | chr27:28921899-28922149 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 211-374 |
| Cow position: | chr27:12246646-12246488 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 211-423 |
| Cow position: | chr27:23860153-23859940 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 154, 54 |
| Conread position: | 211-428 |
| Cow position: | chr27:19589467-19589251 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 212-352 |
| Cow position: | chr27:7731267-7731402 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 212-423 |
| Cow position: | chr27:16512180-16512390 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 152, 86 |
| Conread position: | 212-424 |
| Cow position: | chr27:8790750-8790966 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 71, 88 |
| Conread position: | 212-424 |
| Cow position: | chr27:19509008-19508788 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 212-426 |
| Cow position: | chr27:28931809-28932028 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 213-421 |
| Cow position: | chr27:26111924-26112139 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 86 |
| Conread position: | 213-426 |
| Cow position: | chr27:16705242-16705027 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 213-438 |
| Cow position: | chr27:9977675-9977442 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 84 |
| Conread position: | 213-454 |
| Cow position: | chr27:31210536-31210295 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 150, 30 |
| Conread position: | 213-455 |
| Cow position: | chr27:24477406-24477169 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 213, 23 |
| Conread position: | 213-456 |
| Cow position: | chr27:30868750-30869008 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 133, 84 |
| Conread position: | 214-378 |
| Cow position: | chr27:28034862-28035018 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 214-427 |
| Cow position: | chr27:16103796-16103584 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 147, 62 |
| Conread position: | 214-466 |
| Cow position: | chr27:11561765-11561507 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 147, 83 |
| Conread position: | 215-426 |
| Cow position: | chr27:212944-212725 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 146, 8 |
| Conread position: | 216-374 |
| Cow position: | chr27:20901558-20901396 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 153 |
| Conread position: | 216-384 |
| Cow position: | chr27:22454788-22454955 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 141, 81 |
| Conread position: | 216-424 |
| Cow position: | chr27:3306760-3306562 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 216-454 |
| Cow position: | chr27:15315504-15315264 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 149, 51 |
| Conread position: | 217-338 |
| Cow position: | chr27:21976039-21975922 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 217-368 |
| Cow position: | chr27:21453108-21453255 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 217-375 |
| Cow position: | chr27:20584470-20584619 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 217-375 |
| Cow position: | chr27:30489424-30489578 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 217-424 |
| Cow position: | chr27:16965559-16965351 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 5, 36 |
| Conread position: | 217-424 |
| Cow position: | chr27:27058419-27058629 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 149, 33 |
| Conread position: | 217-465 |
| Cow position: | chr27:8062366-8062614 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 143, 6 |
| Conread position: | 218-434 |
| Cow position: | chr27:6319901-6319690 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 135, 5 |
| Conread position: | 218-470 |
| Cow position: | chr27:26121745-26121489 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 148, 79 |
| Conread position: | 219-367 |
| Cow position: | chr27:23216334-23216475 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 220-375 |
| Cow position: | chr27:22723710-22723860 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 220-424 |
| Cow position: | chr27:1636952-1637150 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 220-424 |
| Cow position: | chr27:22245609-22245417 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 134, 77 |
| Conread position: | 220-454 |
| Cow position: | chr27:17472791-17472560 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 141, 78 |
| Conread position: | 221-351 |
| Cow position: | chr27:12191497-12191622 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 221-424 |
| Cow position: | chr27:28001830-28002027 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 221-463 |
| Cow position: | chr27:28478562-28478324 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 144, 78 |
| Conread position: | 221-470 |
| Cow position: | chr27:25809537-25809788 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 144, 56 |
| Conread position: | 221-478 |
| Cow position: | chr27:31386648-31386912 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 223-459 |
| Cow position: | chr27:18435153-18435397 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 140, 68 |
| Conread position: | 226-423 |
| Cow position: | chr27:29319388-29319183 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 135, 71 |
| Conread position: | 226-424 |
| Cow position: | chr27:20283621-20283420 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 226-424 |
| Cow position: | chr27:26793806-26794008 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 133, 71 |
| Conread position: | 227-375 |
| Cow position: | chr27:30908648-30908506 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 227-424 |
| Cow position: | chr27:26489932-26490129 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 136, 71 |
| Conread position: | 227-424 |
| Cow position: | chr27:29388648-29388448 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 70 |
| Conread position: | 227-425 |
| Cow position: | chr27:20749038-20749227 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 227-454 |
| Cow position: | chr27:20514795-20514565 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 134, 50 |
| Conread position: | 229-429 |
| Cow position: | chr27:12596745-12596553 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 230-420 |
| Cow position: | chr27:13204432-13204245 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 56 |
| Conread position: | 231-424 |
| Cow position: | chr27:20548783-20548586 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 130, 66 |
| Conread position: | 233-426 |
| Cow position: | chr27:7958860-7959057 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 235-454 |
| Cow position: | chr27:13251980-13251772 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 92, 29 |
| Conread position: | 236-424 |
| Cow position: | chr27:15409069-15409249 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 236-424 |
| Cow position: | chr27:23452428-23452239 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 127, 38 |
| Conread position: | 236-429 |
| Cow position: | chr27:26481228-26481426 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 125, 61 |
| Conread position: | 236-449 |
| Cow position: | chr27:6162443-6162653 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 118, 62 |
| Conread position: | 236-452 |
| Cow position: | chr27:19452969-19452742 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 125, 62 |
| Conread position: | 236-457 |
| Cow position: | chr27:26226323-26226549 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 127, 62 |
| Conread position: | 237-424 |
| Cow position: | chr27:7412359-7412170 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 116, 61 |
| Conread position: | 244-387 |
| Cow position: | chr27:17918758-17918897 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 245-377 |
| Cow position: | chr27:27255946-27255818 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 246-424 |
| Cow position: | chr27:17102853-17102676 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 120, 51 |
| Conread position: | 246-424 |
| Cow position: | chr27:19741451-19741615 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 246-465 |
| Cow position: | chr27:19576366-19576594 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 50 |
| Conread position: | 247-424 |
| Cow position: | chr27:16246763-16246583 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 247-428 |
| Cow position: | chr27:25790248-25790071 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 248-448 |
| Cow position: | chr27:4413863-4414065 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 249-473 |
| Cow position: | chr27:22792784-22792570 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 105, 10 |
| Conread position: | 252-424 |
| Cow position: | chr27:232505-232327 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 109, 45 |
| Conread position: | 252-424 |
| Cow position: | chr27:26400770-26400941 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 113, 46 |
| Conread position: | 252-426 |
| Cow position: | chr27:1184226-1184399 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 108, 43 |
| Conread position: | 252-455 |
| Cow position: | chr27:26236277-26236072 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 51 |
| Conread position: | 257-457 |
| Cow position: | chr27:24356984-24356776 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 92, 41 |
| Conread position: | 259-424 |
| Cow position: | chr27:20048578-20048413 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 39 |
| Conread position: | 259-438 |
| Cow position: | chr27:21025630-21025454 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 114, 44 |
| Conread position: | 259-467 |
| Cow position: | chr27:25382208-25382415 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 102, 11 |
| Conread position: | 260-423 |
| Cow position: | chr27:26909648-26909811 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 38 |
| Conread position: | 260-424 |
| Cow position: | chr27:1067511-1067352 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 260-438 |
| Cow position: | chr27:19557331-19557152 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 260-463 |
| Cow position: | chr27:14343505-14343698 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 264-424 |
| Cow position: | chr27:21951039-21951204 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 97, 34 |
| Conread position: | 264-455 |
| Cow position: | chr27:18491495-18491306 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 99, 34 |
| Conread position: | 268-424 |
| Cow position: | chr27:22497957-22497804 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 270-423 |
| Cow position: | chr27:26984095-26983940 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 28 |
| Conread position: | 273-424 |
| Cow position: | chr27:23760048-23760202 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 91, 16 |
| Conread position: | 302-449 |
| Cow position: | chr27:20561487-20561335 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 312-465 |
| Cow position: | chr27:4195443-4195287 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 43 |
Show alignments to all cow chromosomes.