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Cow genome map

           
Conread name:
           
Thy1-THY010112C06
        

               
Conread position:
               
151-424
               

               
Cow position:
               
chr3:70334819-70334536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
172-352
               

               
Cow position:
               
chr3:3471943-3472117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
172-426
               

               
Cow position:
               
chr3:19585767-19586022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
176-425
               

               
Cow position:
               
chr3:39969956-39969706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
185, 36
               

               
Conread position:
               
178-430
               

               
Cow position:
               
chr3:71474497-71474245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 78
               

               
Conread position:
               
191-406
               

               
Cow position:
               
chr3:6873320-6873124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
208, 35
               

               
Conread position:
               
192-375
               

               
Cow position:
               
chr3:12711991-12711815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
192-375
               

               
Cow position:
               
chr3:67704469-67704644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
192-377
               

               
Cow position:
               
chr3:53704040-53703862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
192-383
               

               
Cow position:
               
chr3:58767186-58767369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
192-427
               

               
Cow position:
               
chr3:8061052-8061279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
169, 20
               

               
Conread position:
               
192-435
               

               
Cow position:
               
chr3:11640654-11640905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
169, 106
               

               
Conread position:
               
192-437
               

               
Cow position:
               
chr3:37041341-37041591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
192-451
               

               
Cow position:
               
chr3:75050695-75050434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
163, 35
               

               
Conread position:
               
192-454
               

               
Cow position:
               
chr3:58318027-58317757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
170, 95
               

               
Conread position:
               
192-466
               

               
Cow position:
               
chr3:65969088-65969372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
169, 104
               

               
Conread position:
               
193-375
               

               
Cow position:
               
chr3:55984021-55984198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
194-424
               

               
Cow position:
               
chr3:15153615-15153844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
167, 34
               

               
Conread position:
               
195-449
               

               
Cow position:
               
chr3:30180010-30180264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
197-457
               

               
Cow position:
               
chr3:4548955-4549213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
166, 22
               

               
Conread position:
               
198-406
               

               
Cow position:
               
chr3:15751782-15751576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
163, 9
               

               
Conread position:
               
199-428
               

               
Cow position:
               
chr3:83845843-83846055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
200-361
               

               
Cow position:
               
chr3:32457123-32457279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
201-422
               

               
Cow position:
               
chr3:23408428-23408210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
201-470
               

               
Cow position:
               
chr3:58527317-58527580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
203-449
               

               
Cow position:
               
chr3:57764153-57764400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
204-375
               

               
Cow position:
               
chr3:59884134-59883970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
204-424
               

               
Cow position:
               
chr3:45881830-45882055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
204-424
               

               
Cow position:
               
chr3:50614574-50614779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
204-424
               

               
Cow position:
               
chr3:54434911-54435124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
204-424
               

               
Cow position:
               
chr3:57577632-57577852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
156, 13
               

               
Conread position:
               
204-443
               

               
Cow position:
               
chr3:52608116-52608354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
204-454
               

               
Cow position:
               
chr3:51609252-51608999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
206-371
               

               
Cow position:
               
chr3:58940061-58940221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
162, 51
               

               
Conread position:
               
206-454
               

               
Cow position:
               
chr3:72027569-72027829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr3:3316879-3316705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr3:38347131-38347300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
207-406
               

               
Cow position:
               
chr3:77271340-77271140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
154, 20
               

               
Conread position:
               
207-423
               

               
Cow position:
               
chr3:70895980-70896194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
207-424
               

               
Cow position:
               
chr3:2637862-2638089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
154, 91
               

               
Conread position:
               
207-424
               

               
Cow position:
               
chr3:14194243-14194033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
207-424
               

               
Cow position:
               
chr3:15950978-15950761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
207-424
               

               
Cow position:
               
chr3:23920496-23920270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
207-424
               

               
Cow position:
               
chr3:35074817-35075028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
153, 36
               

               
Conread position:
               
207-426
               

               
Cow position:
               
chr3:39996956-39996735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
207-457
               

               
Cow position:
               
chr3:36375601-36375353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
208-352
               

               
Cow position:
               
chr3:56438-56300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
208-375
               

               
Cow position:
               
chr3:57624403-57624564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
208-404
               

               
Cow position:
               
chr3:69650952-69650753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
153, 89
               

               
Conread position:
               
208-424
               

               
Cow position:
               
chr3:20802683-20802484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
208-424
               

               
Cow position:
               
chr3:81234328-81234544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
208-426
               

               
Cow position:
               
chr3:22221265-22221484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
155, 74
               

               
Conread position:
               
208-454
               

               
Cow position:
               
chr3:27976588-27976337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
208-454
               

               
Cow position:
               
chr3:55318964-55318705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
208-455
               

               
Cow position:
               
chr3:34270854-34271089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
208-468
               

               
Cow position:
               
chr3:20993751-20993995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
223, 35
               

               
Conread position:
               
209-352
               

               
Cow position:
               
chr3:73820431-73820292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
209-352
               

               
Cow position:
               
chr3:81277531-81277391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
209-353
               

               
Cow position:
               
chr3:36913991-36914128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
209-372
               

               
Cow position:
               
chr3:33693760-33693916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
209-375
               

               
Cow position:
               
chr3:74134639-74134804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
209-375
               

               
Cow position:
               
chr3:84175885-84175724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr3:61467253-61467087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
209-402
               

               
Cow position:
               
chr3:72503959-72503769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
209-406
               

               
Cow position:
               
chr3:14601772-14601565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
209-418
               

               
Cow position:
               
chr3:65413340-65413124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
145, 89
               

               
Conread position:
               
209-423
               

               
Cow position:
               
chr3:11987270-11987483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
151, 14
               

               
Conread position:
               
209-423
               

               
Cow position:
               
chr3:74846772-74846570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
209-424
               

               
Cow position:
               
chr3:74533288-74533490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
209-424
               

               
Cow position:
               
chr3:84174238-84174460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
209-444
               

               
Cow position:
               
chr3:52652142-52651904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
209-448
               

               
Cow position:
               
chr3:2393023-2392788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
156, 11
               

               
Conread position:
               
209-457
               

               
Cow position:
               
chr3:46792323-46792579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
154, 89
               

               
Conread position:
               
209-467
               

               
Cow position:
               
chr3:2674968-2675229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
210-342
               

               
Cow position:
               
chr3:78896582-78896714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
210-350
               

               
Cow position:
               
chr3:48810706-48810570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
210-350
               

               
Cow position:
               
chr3:72676027-72676166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
210-351
               

               
Cow position:
               
chr3:46901132-46901274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
210-359
               

               
Cow position:
               
chr3:11606252-11606404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
210-361
               

               
Cow position:
               
chr3:64373217-64373070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
210-361
               

               
Cow position:
               
chr3:80581599-80581741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
210-365
               

               
Cow position:
               
chr3:11292309-11292158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
210-369
               

               
Cow position:
               
chr3:17895784-17895943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
210-369
               

               
Cow position:
               
chr3:59101770-59101921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
210-374
               

               
Cow position:
               
chr3:16254895-16254742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
210-374
               

               
Cow position:
               
chr3:27727891-27727731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
151, 61
               

               
Conread position:
               
210-375
               

               
Cow position:
               
chr3:10103980-10104140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
210-375
               

               
Cow position:
               
chr3:61278849-61279008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
210-376
               

               
Cow position:
               
chr3:23667558-23667721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
8, 93
               

               
Conread position:
               
210-377
               

               
Cow position:
               
chr3:70401837-70401998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
210-378
               

               
Cow position:
               
chr3:26920849-26921013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 10
               

               
Conread position:
               
210-378
               

               
Cow position:
               
chr3:54100786-54100623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
210-379
               

               
Cow position:
               
chr3:80053604-80053438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
210-413
               

               
Cow position:
               
chr3:65019924-65019712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
210-422
               

               
Cow position:
               
chr3:14546942-14547153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr3:3889629-3889421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr3:7566478-7566265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
153, 87
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr3:15052010-15051796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr3:51578386-51578168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr3:56476620-56476830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr3:58765139-58764930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr3:59000811-59000607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
156, 7
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr3:73395056-73395271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
151, 48
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr3:82056174-82055972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
210-438
               

               
Cow position:
               
chr3:81087698-81087465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
6, 71
               

               
Conread position:
               
210-439
               

               
Cow position:
               
chr3:18459587-18459360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
145, 10
               

               
Conread position:
               
210-443
               

               
Cow position:
               
chr3:77365350-77365111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
144, 17
               

               
Conread position:
               
210-444
               

               
Cow position:
               
chr3:3649283-3649057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
211, 47
               

               
Conread position:
               
210-444
               

               
Cow position:
               
chr3:71231333-71231580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
210-448
               

               
Cow position:
               
chr3:76268037-76267794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
210-449
               

               
Cow position:
               
chr3:4050136-4050364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
184, 10
               

               
Conread position:
               
210-453
               

               
Cow position:
               
chr3:56949150-56948904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
8, 92
               

               
Conread position:
               
210-454
               

               
Cow position:
               
chr3:3032347-3032595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
210-454
               

               
Cow position:
               
chr3:15228886-15228649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
210-454
               

               
Cow position:
               
chr3:48459391-48459144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
210-455
               

               
Cow position:
               
chr3:68708071-68707835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
210-457
               

               
Cow position:
               
chr3:71497199-71496938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
151, 87
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr3:83215201-83215468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
153, 94
               

               
Conread position:
               
210-466
               

               
Cow position:
               
chr3:210259-210522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
211-346
               

               
Cow position:
               
chr3:23444948-23444817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
211-367
               

               
Cow position:
               
chr3:8393879-8394034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
211-413
               

               
Cow position:
               
chr3:23753440-23753629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
150, 53
               

               
Conread position:
               
211-423
               

               
Cow position:
               
chr3:74787371-74787581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
211-424
               

               
Cow position:
               
chr3:10668939-10668723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
211-424
               

               
Cow position:
               
chr3:17936899-17936691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
211-424
               

               
Cow position:
               
chr3:59299514-59299729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
152, 92
               

               
Conread position:
               
211-426
               

               
Cow position:
               
chr3:30357463-30357667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
150, 20
               

               
Conread position:
               
211-438
               

               
Cow position:
               
chr3:9641506-9641731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
211-452
               

               
Cow position:
               
chr3:23105423-23105175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
211-454
               

               
Cow position:
               
chr3:79271772-79271517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
211-457
               

               
Cow position:
               
chr3:64196766-64197010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
142, 86
               

               
Conread position:
               
212-361
               

               
Cow position:
               
chr3:30222132-30222277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
212-375
               

               
Cow position:
               
chr3:21997846-21997688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
212-377
               

               
Cow position:
               
chr3:38691468-38691304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
212-384
               

               
Cow position:
               
chr3:74900699-74900534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
212-421
               

               
Cow position:
               
chr3:2506538-2506323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
212-424
               

               
Cow position:
               
chr3:18686846-18687057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
212-424
               

               
Cow position:
               
chr3:31350163-31349952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 88
               

               
Conread position:
               
212-424
               

               
Cow position:
               
chr3:53046717-53046502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
149, 8
               

               
Conread position:
               
212-424
               

               
Cow position:
               
chr3:60597485-60597693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
137, 75
               

               
Conread position:
               
212-447
               

               
Cow position:
               
chr3:18001138-18001366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
6, 86
               

               
Conread position:
               
212-449
               

               
Cow position:
               
chr3:57274002-57274239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
142, 22
               

               
Conread position:
               
212-454
               

               
Cow position:
               
chr3:54946072-54946312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
153, 84
               

               
Conread position:
               
212-454
               

               
Cow position:
               
chr3:67744689-67744453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
213-361
               

               
Cow position:
               
chr3:21641931-21642073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
213-361
               

               
Cow position:
               
chr3:24935307-24935450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
213-413
               

               
Cow position:
               
chr3:73299025-73299213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
213-423
               

               
Cow position:
               
chr3:20997059-20996847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
213-423
               

               
Cow position:
               
chr3:79272632-79272421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
213-424
               

               
Cow position:
               
chr3:23132227-23132012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
150, 85
               

               
Conread position:
               
213-424
               

               
Cow position:
               
chr3:65236966-65237179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
148, 86
               

               
Conread position:
               
213-447
               

               
Cow position:
               
chr3:71423609-71423384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
202, 64
               

               
Conread position:
               
213-450
               

               
Cow position:
               
chr3:31804822-31804581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
213-452
               

               
Cow position:
               
chr3:55819699-55819937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
213-457
               

               
Cow position:
               
chr3:3698601-3698836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
215, 84
               

               
Conread position:
               
214-377
               

               
Cow position:
               
chr3:63269166-63269325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 83
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr3:80564910-80565093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
147, 29
               

               
Conread position:
               
214-429
               

               
Cow position:
               
chr3:9663229-9663008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
145, 86
               

               
Conread position:
               
214-440
               

               
Cow position:
               
chr3:16107414-16107196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
152, 68
               

               
Conread position:
               
214-444
               

               
Cow position:
               
chr3:2648567-2648332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
149, 83
               

               
Conread position:
               
214-447
               

               
Cow position:
               
chr3:73467575-73467811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
214-454
               

               
Cow position:
               
chr3:27274474-27274716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
151, 77
               

               
Conread position:
               
214-456
               

               
Cow position:
               
chr3:20841929-20841691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
162, 8
               

               
Conread position:
               
214-457
               

               
Cow position:
               
chr3:83491029-83491275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
155, 81
               

               
Conread position:
               
214-465
               

               
Cow position:
               
chr3:10591573-10591315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
9, 157
               

               
Conread position:
               
214-465
               

               
Cow position:
               
chr3:26904054-26904299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
214, 6
               

               
Conread position:
               
215-361
               

               
Cow position:
               
chr3:28898279-28898137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
215-424
               

               
Cow position:
               
chr3:2483948-2484158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
146, 78
               

               
Conread position:
               
215-424
               

               
Cow position:
               
chr3:17134278-17134487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
145, 82
               

               
Conread position:
               
215-424
               

               
Cow position:
               
chr3:28908259-28908060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
215-438
               

               
Cow position:
               
chr3:19711391-19711161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
215-438
               

               
Cow position:
               
chr3:29360202-29359988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 63
               

               
Conread position:
               
215-449
               

               
Cow position:
               
chr3:60389709-60389933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
188, 12
               

               
Conread position:
               
215-454
               

               
Cow position:
               
chr3:59604790-59605036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
215-455
               

               
Cow position:
               
chr3:48900388-48900145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
146, 63
               

               
Conread position:
               
215-457
               

               
Cow position:
               
chr3:75778118-75777883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
215-465
               

               
Cow position:
               
chr3:34669784-34669548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
216-377
               

               
Cow position:
               
chr3:57877512-57877668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
216-435
               

               
Cow position:
               
chr3:49996778-49996552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
216-444
               

               
Cow position:
               
chr3:23804461-23804684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
216-454
               

               
Cow position:
               
chr3:53904402-53904629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
210, 83
               

               
Conread position:
               
216-454
               

               
Cow position:
               
chr3:64280986-64280750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 83
               

               
Conread position:
               
217-351
               

               
Cow position:
               
chr3:5097153-5097283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
217-375
               

               
Cow position:
               
chr3:4319657-4319810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
217-375
               

               
Cow position:
               
chr3:81471150-81470996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 83
               

               
Conread position:
               
217-396
               

               
Cow position:
               
chr3:53739239-53739066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
217-422
               

               
Cow position:
               
chr3:8393296-8393494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
147, 72
               

               
Conread position:
               
217-423
               

               
Cow position:
               
chr3:65058646-65058853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
148, 43
               

               
Conread position:
               
217-424
               

               
Cow position:
               
chr3:3656460-3656671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
138, 80
               

               
Conread position:
               
217-424
               

               
Cow position:
               
chr3:5365623-5365821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
217-424
               

               
Cow position:
               
chr3:6182275-6182076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
153, 60
               

               
Conread position:
               
217-424
               

               
Cow position:
               
chr3:21867092-21866882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 84
               

               
Conread position:
               
217-424
               

               
Cow position:
               
chr3:23471513-23471307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
143, 80
               

               
Conread position:
               
217-424
               

               
Cow position:
               
chr3:46541883-46541695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
217-424
               

               
Cow position:
               
chr3:77582055-77582262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 60
               

               
Conread position:
               
217-449
               

               
Cow position:
               
chr3:18059648-18059885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
217-452
               

               
Cow position:
               
chr3:31309408-31309164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
143, 80
               

               
Conread position:
               
217-454
               

               
Cow position:
               
chr3:13380329-13380092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 80
               

               
Conread position:
               
217-454
               

               
Cow position:
               
chr3:76024454-76024688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
217-456
               

               
Cow position:
               
chr3:56678405-56678160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chr3:1517566-1517321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
145, 80
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chr3:3985273-3985513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
160, 57
               

               
Conread position:
               
218-424
               

               
Cow position:
               
chr3:33252942-33252736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
142, 79
               

               
Conread position:
               
218-424
               

               
Cow position:
               
chr3:68303263-68303474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 52
               

               
Conread position:
               
218-455
               

               
Cow position:
               
chr3:39248077-39247835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
156, 79
               

               
Conread position:
               
219-375
               

               
Cow position:
               
chr3:28258043-28258193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
219-424
               

               
Cow position:
               
chr3:29334468-29334254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
219-453
               

               
Cow position:
               
chr3:59828446-59828201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
219-455
               

               
Cow position:
               
chr3:48252833-48253070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
146, 78
               

               
Conread position:
               
220-361
               

               
Cow position:
               
chr3:20515869-20515732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
220-361
               

               
Cow position:
               
chr3:59621699-59621562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
220-396
               

               
Cow position:
               
chr3:10026736-10026572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
220-422
               

               
Cow position:
               
chr3:54506656-54506860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
141, 83
               

               
Conread position:
               
220-424
               

               
Cow position:
               
chr3:70756692-70756483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 33
               

               
Conread position:
               
220-424
               

               
Cow position:
               
chr3:75238406-75238616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
141, 77
               

               
Conread position:
               
220-452
               

               
Cow position:
               
chr3:19792854-19793087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
220-452
               

               
Cow position:
               
chr3:55010212-55009987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
141, 35
               

               
Conread position:
               
220-455
               

               
Cow position:
               
chr3:9026135-9025895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
220-455
               

               
Cow position:
               
chr3:40213084-40212846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
129, 34
               

               
Conread position:
               
221-352
               

               
Cow position:
               
chr3:79292779-79292905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
221-375
               

               
Cow position:
               
chr3:17934988-17934837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
140, 76
               

               
Conread position:
               
221-396
               

               
Cow position:
               
chr3:73708997-73709175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
140, 76
               

               
Conread position:
               
221-424
               

               
Cow position:
               
chr3:25477756-25477948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
221-424
               

               
Cow position:
               
chr3:74644507-74644716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
221-427
               

               
Cow position:
               
chr3:35153567-35153765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
222-377
               

               
Cow position:
               
chr3:56704370-56704219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
222-424
               

               
Cow position:
               
chr3:84250591-84250393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
222-457
               

               
Cow position:
               
chr3:28902808-28902570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
133, 75
               

               
Conread position:
               
222-467
               

               
Cow position:
               
chr3:3556496-3556744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
141, 76
               

               
Conread position:
               
223-467
               

               
Cow position:
               
chr3:18831371-18831617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
224-444
               

               
Cow position:
               
chr3:8814159-8813922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
137, 19
               

               
Conread position:
               
225-423
               

               
Cow position:
               
chr3:82366083-82366284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
226-350
               

               
Cow position:
               
chr3:3638140-3638253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
226-358
               

               
Cow position:
               
chr3:74502370-74502242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
226-374
               

               
Cow position:
               
chr3:57760453-57760597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
226-377
               

               
Cow position:
               
chr3:82165613-82165459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
77, 145
               

               
Conread position:
               
226-389
               

               
Cow position:
               
chr3:48478074-48477918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
226-390
               

               
Cow position:
               
chr3:82461134-82461298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
139, 74
               

               
Conread position:
               
226-424
               

               
Cow position:
               
chr3:17058588-17058391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
135, 10
               

               
Conread position:
               
226-424
               

               
Cow position:
               
chr3:18393439-18393246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
226-424
               

               
Cow position:
               
chr3:39988280-39988096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
226-424
               

               
Cow position:
               
chr3:59610763-59610563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
135, 75
               

               
Conread position:
               
226-424
               

               
Cow position:
               
chr3:83889202-83889405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 52
               

               
Conread position:
               
226-431
               

               
Cow position:
               
chr3:68586978-68587181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
226-442
               

               
Cow position:
               
chr3:52456873-52457090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
226-446
               

               
Cow position:
               
chr3:54739929-54739715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
226-452
               

               
Cow position:
               
chr3:11229410-11229181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
135, 72
               

               
Conread position:
               
226-452
               

               
Cow position:
               
chr3:71238109-71238340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 75
               

               
Conread position:
               
226-453
               

               
Cow position:
               
chr3:59474077-59474304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
136, 71
               

               
Conread position:
               
226-453
               

               
Cow position:
               
chr3:67520214-67519986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
202, 42
               

               
Conread position:
               
226-454
               

               
Cow position:
               
chr3:73764239-73764029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
226-456
               

               
Cow position:
               
chr3:5040352-5040117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
226-465
               

               
Cow position:
               
chr3:2025151-2025396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
226-476
               

               
Cow position:
               
chr3:14552830-14553081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 74
               

               
Conread position:
               
227-363
               

               
Cow position:
               
chr3:11705207-11705340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
133, 71
               

               
Conread position:
               
227-420
               

               
Cow position:
               
chr3:51234138-51233952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
227-454
               

               
Cow position:
               
chr3:15973522-15973759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
228-424
               

               
Cow position:
               
chr3:19793633-19793434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 61
               

               
Conread position:
               
228-425
               

               
Cow position:
               
chr3:53270787-53270990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
133, 69
               

               
Conread position:
               
228-444
               

               
Cow position:
               
chr3:15443771-15443549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
135, 38
               

               
Conread position:
               
228-449
               

               
Cow position:
               
chr3:28897063-28896842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
228-449
               

               
Cow position:
               
chr3:40100760-40100548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
228-472
               

               
Cow position:
               
chr3:909676-909439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
183, 75
               

               
Conread position:
               
229-424
               

               
Cow position:
               
chr3:54905576-54905762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
229-429
               

               
Cow position:
               
chr3:35624586-35624382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
134, 7
               

               
Conread position:
               
230-424
               

               
Cow position:
               
chr3:45667387-45667187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
230-466
               

               
Cow position:
               
chr3:16505516-16505284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
231-423
               

               
Cow position:
               
chr3:41863584-41863777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
235-424
               

               
Cow position:
               
chr3:15160484-15160673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 65
               

               
Conread position:
               
236-423
               

               
Cow position:
               
chr3:60264751-60264566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 62
               

               
Conread position:
               
236-452
               

               
Cow position:
               
chr3:26982023-26982238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
117, 61
               

               
Conread position:
               
236-455
               

               
Cow position:
               
chr3:55177781-55177559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
237-424
               

               
Cow position:
               
chr3:46559749-46559560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
237-484
               

               
Cow position:
               
chr3:44959908-44960158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
238-375
               

               
Cow position:
               
chr3:59630542-59630413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
239-424
               

               
Cow position:
               
chr3:38828727-38828907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
124, 58
               

               
Conread position:
               
240-456
               

               
Cow position:
               
chr3:14465737-14465524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
134, 57
               

               
Conread position:
               
241-424
               

               
Cow position:
               
chr3:61024052-61023864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
120, 6
               

               
Conread position:
               
243-376
               

               
Cow position:
               
chr3:61323297-61323432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
244-367
               

               
Cow position:
               
chr3:40199322-40199204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
245-454
               

               
Cow position:
               
chr3:32610238-32610438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
181, 32
               

               
Conread position:
               
246-424
               

               
Cow position:
               
chr3:20021244-20021424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 52
               

               
Conread position:
               
246-424
               

               
Cow position:
               
chr3:76056310-76056132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
115, 54
               

               
Conread position:
               
246-449
               

               
Cow position:
               
chr3:77276483-77276286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
246-449
               

               
Cow position:
               
chr3:78071817-78071605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
247-375
               

               
Cow position:
               
chr3:35285019-35285143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
247-406
               

               
Cow position:
               
chr3:24596447-24596286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
247-424
               

               
Cow position:
               
chr3:72407-72576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
247-426
               

               
Cow position:
               
chr3:75966805-75966624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
247-449
               

               
Cow position:
               
chr3:27246983-27246785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
184, 57
               

               
Conread position:
               
248-424
               

               
Cow position:
               
chr3:4120389-4120215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 49
               

               
Conread position:
               
248-456
               

               
Cow position:
               
chr3:14518102-14517893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
248-464
               

               
Cow position:
               
chr3:56943949-56943730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 48
               

               
Conread position:
               
249-422
               

               
Cow position:
               
chr3:31115292-31115124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
249-424
               

               
Cow position:
               
chr3:49363087-49363263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 49
               

               
Conread position:
               
250-424
               

               
Cow position:
               
chr3:54557653-54557822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
130, 48
               

               
Conread position:
               
250-426
               

               
Cow position:
               
chr3:3401528-3401699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
250-444
               

               
Cow position:
               
chr3:73701483-73701681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
250-448
               

               
Cow position:
               
chr3:59681925-59681727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 48
               

               
Conread position:
               
252-424
               

               
Cow position:
               
chr3:43389147-43388969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
252-424
               

               
Cow position:
               
chr3:50350988-50350822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
252-424
               

               
Cow position:
               
chr3:59271814-59271987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
252-424
               

               
Cow position:
               
chr3:70402625-70402794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
253-426
               

               
Cow position:
               
chr3:20158050-20158232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
253-438
               

               
Cow position:
               
chr3:4271354-4271541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
253-453
               

               
Cow position:
               
chr3:23037527-23037318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
254-406
               

               
Cow position:
               
chr3:25038009-25037856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
110, 44
               

               
Conread position:
               
257-409
               

               
Cow position:
               
chr3:35582827-35582982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
257-424
               

               
Cow position:
               
chr3:27286504-27286671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
257-424
               

               
Cow position:
               
chr3:59885526-59885687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
257-454
               

               
Cow position:
               
chr3:59317688-59317893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 41
               

               
Conread position:
               
258-465
               

               
Cow position:
               
chr3:23640330-23640538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
259-424
               

               
Cow position:
               
chr3:28884173-28884006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
260-417
               

               
Cow position:
               
chr3:11715986-11716130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
261-454
               

               
Cow position:
               
chr3:2016425-2016618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
262-439
               

               
Cow position:
               
chr3:37641316-37641503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
263-424
               

               
Cow position:
               
chr3:29188602-29188438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
263-424
               

               
Cow position:
               
chr3:83199503-83199669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
263-438
               

               
Cow position:
               
chr3:24872696-24872868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
263-453
               

               
Cow position:
               
chr3:28323208-28323399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
264-406
               

               
Cow position:
               
chr3:14598928-14599067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
264-455
               

               
Cow position:
               
chr3:59597171-59597357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
264-455
               

               
Cow position:
               
chr3:79207710-79207525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
164, 34
               

               
Conread position:
               
264-473
               

               
Cow position:
               
chr3:15859386-15859174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
266-424
               

               
Cow position:
               
chr3:13329792-13329637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
266-426
               

               
Cow position:
               
chr3:70333226-70333071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
273-449
               

               
Cow position:
               
chr3:22903754-22903577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
274-426
               

               
Cow position:
               
chr3:12637512-12637662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
284-424
               

               
Cow position:
               
chr3:53552967-53552828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
286-426
               

               
Cow position:
               
chr3:26759880-26760015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
289-424
               

               
Cow position:
               
chr3:72556783-72556921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
300-422
               

               
Cow position:
               
chr3:24922772-24922896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
302-424
               

               
Cow position:
               
chr3:68624244-68624375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
302-426
               

               
Cow position:
               
chr3:43527757-43527636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
328-453
               

               
Cow position:
               
chr3:15952355-15952481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
100, 37
               
Show alignments to all cow chromosomes.