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Cow genome map

           
Conread name:
           
Thy1-THY010121B08
        

               
Conread position:
               
10-312
               

               
Cow position:
               
chr11:67550295-67550587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 99
               

               
Conread position:
               
11-117
               

               
Cow position:
               
chr11:20205771-20205879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
11-130
               

               
Cow position:
               
chr11:16801876-16801992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-130
               

               
Cow position:
               
chr11:21885913-21885793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
11-131
               

               
Cow position:
               
chr11:897754-897631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-134
               

               
Cow position:
               
chr11:69652701-69652825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-135
               

               
Cow position:
               
chr11:38211726-38211600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-147
               

               
Cow position:
               
chr11:18447411-18447548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-157
               

               
Cow position:
               
chr11:29699619-29699768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
11-160
               

               
Cow position:
               
chr11:48248135-48248286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-161
               

               
Cow position:
               
chr11:3790923-3790764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
11-162
               

               
Cow position:
               
chr11:30484000-30483845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-167
               

               
Cow position:
               
chr11:4637091-4637250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-167
               

               
Cow position:
               
chr11:30867264-30867104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-170
               

               
Cow position:
               
chr11:31410797-31410963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-171
               

               
Cow position:
               
chr11:17721721-17721885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 99
               

               
Conread position:
               
11-171
               

               
Cow position:
               
chr11:79018978-79019140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-172
               

               
Cow position:
               
chr11:72292633-72292461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
11-173
               

               
Cow position:
               
chr11:35803217-35803051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
11-173
               

               
Cow position:
               
chr11:46922804-46922981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
11-173
               

               
Cow position:
               
chr11:63866578-63866737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
11-174
               

               
Cow position:
               
chr11:53279634-53279798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
135, 94
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr11:22747250-22747414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr11:33409181-33409345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr11:47724977-47724818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr11:72884516-72884671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-183
               

               
Cow position:
               
chr11:8437613-8437782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr11:17676292-17676467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr11:42159976-42160157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr11:48086001-48085819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chr11:41293737-41293918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-192
               

               
Cow position:
               
chr11:5201571-5201747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
11-192
               

               
Cow position:
               
chr11:39060522-39060702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
11-194
               

               
Cow position:
               
chr11:49057472-49057299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chr11:28993658-28993836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:2575823-2576009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:17036447-17036635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:23407545-23407356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:29659640-29659457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 100
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:30494074-30493893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:33345526-33345338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:40573255-40573438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:40608514-40608702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:49872807-49872992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
134, 94
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:55494760-55494574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:63435601-63435412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:65767280-65767092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:69978051-69977872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:70086413-70086223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:80556300-80556115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr11:83033159-83033342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
11-199
               

               
Cow position:
               
chr11:62789211-62789019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-201
               

               
Cow position:
               
chr11:28168342-28168535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
11-201
               

               
Cow position:
               
chr11:62812869-62813058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-209
               

               
Cow position:
               
chr11:55911566-55911754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
192, 49
               

               
Conread position:
               
11-214
               

               
Cow position:
               
chr11:36328954-36329156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chr11:45435161-45434936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
11-230
               

               
Cow position:
               
chr11:18851988-18851766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
11-233
               

               
Cow position:
               
chr11:69075991-69075753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr11:39499437-39499202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr11:44222966-44222734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
115, 64
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr11:51729367-51729132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr11:53553296-53553080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
11-239
               

               
Cow position:
               
chr11:71390485-71390725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr11:16906970-16907205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr11:48296111-48295870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
154, 94
               

               
Conread position:
               
11-248
               

               
Cow position:
               
chr11:48496512-48496757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr11:71341384-71341622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
11-258
               

               
Cow position:
               
chr11:9270646-9270906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
11-272
               

               
Cow position:
               
chr11:42296539-42296810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-282
               

               
Cow position:
               
chr11:30955081-30954794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
11-294
               

               
Cow position:
               
chr11:19591915-19592203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
11-296
               

               
Cow position:
               
chr11:71492781-71493068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 96
               

               
Conread position:
               
11-299
               

               
Cow position:
               
chr11:11558252-11557958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
11-299
               

               
Cow position:
               
chr11:52983756-52983480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-303
               

               
Cow position:
               
chr11:27765234-27764938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chr11:15382422-15382687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chr11:36238858-36238563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
114, 94
               

               
Conread position:
               
11-311
               

               
Cow position:
               
chr11:17661164-17660872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
11-311
               

               
Cow position:
               
chr11:23586719-23586413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-313
               

               
Cow position:
               
chr11:69810984-69810679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
11-315
               

               
Cow position:
               
chr11:29960376-29960078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
11-323
               

               
Cow position:
               
chr11:11469567-11469868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-323
               

               
Cow position:
               
chr11:71501051-71501357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
11-327
               

               
Cow position:
               
chr11:27404994-27405307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr11:16342148-16342481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr11:18706744-18707053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
124, 53
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr11:35153743-35154067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr11:36658742-36659052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
11-333
               

               
Cow position:
               
chr11:62239825-62239505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
11-335
               

               
Cow position:
               
chr11:62620457-62620137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-337
               

               
Cow position:
               
chr11:2907448-2907774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
185, 27
               

               
Conread position:
               
11-337
               

               
Cow position:
               
chr11:48544522-48544192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
11-354
               

               
Cow position:
               
chr11:377561-377922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-354
               

               
Cow position:
               
chr11:62663154-62663504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 94
               

               
Conread position:
               
11-355
               

               
Cow position:
               
chr11:83230320-83230657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr11:17227564-17227913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
113, 94
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr11:41272218-41271864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
64, 92
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr11:45631685-45632038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
120, 62
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr11:62155719-62155357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-358
               

               
Cow position:
               
chr11:11232375-11232730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 97
               

               
Conread position:
               
11-358
               

               
Cow position:
               
chr11:55052952-55052597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-359
               

               
Cow position:
               
chr11:33341064-33341422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr11:23128459-23128813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr11:56654636-56654271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr11:84795669-84795999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr11:18572881-18572524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr11:43646331-43646696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
11-363
               

               
Cow position:
               
chr11:83043282-83043641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr11:83066568-83066214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr11:1362387-1362763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr11:13040091-13040443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr11:19508338-19508013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr11:21844058-21844416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 26
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr11:40478772-40479155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr11:42519813-42519461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr11:50778448-50778086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr11:55333990-55333628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr11:67600865-67600484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr11:11125744-11125378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 97
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr11:18698960-18698590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr11:48474784-48474424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr11:49149130-49148765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 165
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr11:62226067-62225715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
11-369
               

               
Cow position:
               
chr11:2084224-2083869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-375
               

               
Cow position:
               
chr11:49934650-49935033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-376
               

               
Cow position:
               
chr11:50951635-50951256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
11-382
               

               
Cow position:
               
chr11:1071010-1071395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
11-382
               

               
Cow position:
               
chr11:23232439-23232814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
11-382
               

               
Cow position:
               
chr11:34963150-34962761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-386
               

               
Cow position:
               
chr11:36182775-36182383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
11-386
               

               
Cow position:
               
chr11:66424799-66425179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
11-406
               

               
Cow position:
               
chr11:20761923-20761524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
11-424
               

               
Cow position:
               
chr11:64090016-64090433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-438
               

               
Cow position:
               
chr11:35873922-35874335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-438
               

               
Cow position:
               
chr11:38236332-38235876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 100
               

               
Conread position:
               
11-451
               

               
Cow position:
               
chr11:30355139-30354688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-459
               

               
Cow position:
               
chr11:80819924-80820381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
11-461
               

               
Cow position:
               
chr11:68206761-68207232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
11-463
               

               
Cow position:
               
chr11:31352471-31352957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-469
               

               
Cow position:
               
chr11:1849095-1849555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
11-469
               

               
Cow position:
               
chr11:19238085-19238549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
11-469
               

               
Cow position:
               
chr11:44642211-44642673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
11-471
               

               
Cow position:
               
chr11:49153029-49152546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
11-475
               

               
Cow position:
               
chr11:80923243-80923733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 94
               

               
Conread position:
               
11-476
               

               
Cow position:
               
chr11:24967522-24967067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
11-481
               

               
Cow position:
               
chr11:28644168-28643683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
11-483
               

               
Cow position:
               
chr11:76606753-76606283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chr11:34113346-34112856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 98
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chr11:38639192-38638718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
11-492
               

               
Cow position:
               
chr11:59873009-59872511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
11-493
               

               
Cow position:
               
chr11:69119374-69118880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 96
               

               
Conread position:
               
11-494
               

               
Cow position:
               
chr11:43898219-43897718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
11-495
               

               
Cow position:
               
chr11:44032092-44031580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 180
               

               
Conread position:
               
11-496
               

               
Cow position:
               
chr11:35363562-35363076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-498
               

               
Cow position:
               
chr11:17278595-17279083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
11-498
               

               
Cow position:
               
chr11:77705831-77705343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
11-503
               

               
Cow position:
               
chr11:952349-951848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chr11:59702571-59702058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr11:259091-259608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr11:4207391-4206867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr11:11533851-11534325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr11:18508950-18509437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 67
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr11:27248571-27248067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 94
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr11:30192259-30191735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 102
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr11:44636673-44637189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:41260-40753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 89
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:1625144-1625647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:7590269-7589763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 62
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:8525034-8525531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:10213488-10213985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:17831141-17831662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:25387149-25386642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 99
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:40818546-40819072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:43360703-43361219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:44036800-44036287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 79
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:48272281-48271771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:52297140-52297652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:53778697-53778187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:62150813-62151307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 94
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:63156837-63157338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:64334917-64334428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:65495259-65495759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 64
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr11:77758680-77759186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 67
               

               
Conread position:
               
12-122
               

               
Cow position:
               
chr11:30894924-30895036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
12-136
               

               
Cow position:
               
chr11:76822009-76822133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
119, 93
               

               
Conread position:
               
12-172
               

               
Cow position:
               
chr11:82740589-82740426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chr11:67615167-67615348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr11:32254138-32254323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr11:52690442-52690627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr11:67614842-67615034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
12-198
               

               
Cow position:
               
chr11:35536666-35536481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
12-229
               

               
Cow position:
               
chr11:70250998-70250774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
12-261
               

               
Cow position:
               
chr11:26845514-26845762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 99
               

               
Conread position:
               
12-261
               

               
Cow position:
               
chr11:34646669-34646410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr11:13075732-13075978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
177, 48
               

               
Conread position:
               
12-296
               

               
Cow position:
               
chr11:5543-5251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
12-310
               

               
Cow position:
               
chr11:2925221-2925512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
12-328
               

               
Cow position:
               
chr11:82940545-82940857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
12-334
               

               
Cow position:
               
chr11:27747003-27746674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr11:2917507-2917845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
12-357
               

               
Cow position:
               
chr11:66041357-66040999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr11:51144793-51144400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr11:73924482-73924889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 98
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr11:63847926-63847512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
12-432
               

               
Cow position:
               
chr11:68904997-68905405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
12-435
               

               
Cow position:
               
chr11:35684421-35684857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 96
               

               
Conread position:
               
12-469
               

               
Cow position:
               
chr11:8428591-8428091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr11:15285535-15286047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr11:35580340-35579826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 246
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr11:50152734-50153244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr11:63469955-63469458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr11:76114722-76114224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
13-134
               

               
Cow position:
               
chr11:18915105-18914980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-152
               

               
Cow position:
               
chr11:25119853-25119995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 88
               

               
Conread position:
               
13-187
               

               
Cow position:
               
chr11:64406307-64406129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-187
               

               
Cow position:
               
chr11:83032759-83032585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
13-194
               

               
Cow position:
               
chr11:32690892-32691067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
13-194
               

               
Cow position:
               
chr11:63999013-63999193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 88
               

               
Conread position:
               
13-196
               

               
Cow position:
               
chr11:6194284-6194100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
13-196
               

               
Cow position:
               
chr11:47772311-47772498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
13-240
               

               
Cow position:
               
chr11:35213089-35213323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
13-312
               

               
Cow position:
               
chr11:19500713-19501001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
13-321
               

               
Cow position:
               
chr11:42043918-42044223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
13-328
               

               
Cow position:
               
chr11:3234154-3233841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-328
               

               
Cow position:
               
chr11:20238755-20238433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
13-328
               

               
Cow position:
               
chr11:47899347-47899037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
13-328
               

               
Cow position:
               
chr11:65157329-65157647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
13-336
               

               
Cow position:
               
chr11:31228041-31227747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-346
               

               
Cow position:
               
chr11:22499288-22499614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 92
               

               
Conread position:
               
13-356
               

               
Cow position:
               
chr11:17083231-17083571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-361
               

               
Cow position:
               
chr11:34829707-34830058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
132, 65
               

               
Conread position:
               
13-361
               

               
Cow position:
               
chr11:45646515-45646869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
13-364
               

               
Cow position:
               
chr11:55761947-55761598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
13-366
               

               
Cow position:
               
chr11:3283102-3282775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
306, 69
               

               
Conread position:
               
13-367
               

               
Cow position:
               
chr11:24602049-24601682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 102
               

               
Conread position:
               
13-411
               

               
Cow position:
               
chr11:28691676-28692084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
13-468
               

               
Cow position:
               
chr11:3833285-3833739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
13-484
               

               
Cow position:
               
chr11:67246864-67246402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
281, 50
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chr11:3393131-3393639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chr11:64044312-64043820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
14-201
               

               
Cow position:
               
chr11:6194475-6194297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
14-248
               

               
Cow position:
               
chr11:75874677-75874921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
14-322
               

               
Cow position:
               
chr11:65762513-65762830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
61, 248
               

               
Conread position:
               
14-352
               

               
Cow position:
               
chr11:45897972-45898325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
14-366
               

               
Cow position:
               
chr11:9221654-9222009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
61, 78
               

               
Conread position:
               
14-505
               

               
Cow position:
               
chr11:58588422-58587908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
14-506
               

               
Cow position:
               
chr11:8840668-8841179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
15-150
               

               
Cow position:
               
chr11:19606654-19606517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
15-194
               

               
Cow position:
               
chr11:84490423-84490593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
15-223
               

               
Cow position:
               
chr11:55203383-55203596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
15-328
               

               
Cow position:
               
chr11:77319491-77319184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
15-347
               

               
Cow position:
               
chr11:47545208-47544863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 90
               

               
Conread position:
               
15-356
               

               
Cow position:
               
chr11:13043069-13043410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
15-361
               

               
Cow position:
               
chr11:80564370-80564026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
15-399
               

               
Cow position:
               
chr11:53452274-53452665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
15-415
               

               
Cow position:
               
chr11:65826674-65827063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
56, 95
               

               
Conread position:
               
15-420
               

               
Cow position:
               
chr11:70620121-70619711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
15-465
               

               
Cow position:
               
chr11:30879744-30879289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 58
               

               
Conread position:
               
15-485
               

               
Cow position:
               
chr11:47193589-47193124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
15-487
               

               
Cow position:
               
chr11:36987026-36986561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
15-505
               

               
Cow position:
               
chr11:35881987-35881475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chr11:13061159-13061648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chr11:44234432-44233937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chr11:48650049-48649517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
16-360
               

               
Cow position:
               
chr11:74316785-74316429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
16-366
               

               
Cow position:
               
chr11:81162357-81162710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
17-181
               

               
Cow position:
               
chr11:19946509-19946345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
17-256
               

               
Cow position:
               
chr11:30830539-30830793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
17-278
               

               
Cow position:
               
chr11:6245389-6245120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
181, 58
               

               
Conread position:
               
18-198
               

               
Cow position:
               
chr11:80537561-80537378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
19-311
               

               
Cow position:
               
chr11:39462695-39462395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
19-335
               

               
Cow position:
               
chr11:33348115-33348431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
20-432
               

               
Cow position:
               
chr11:54334399-54333977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
21-196
               

               
Cow position:
               
chr11:69392633-69392452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
21-351
               

               
Cow position:
               
chr11:34032132-34032464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
21-356
               

               
Cow position:
               
chr11:30911933-30912265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 32
               

               
Conread position:
               
21-505
               

               
Cow position:
               
chr11:46746704-46746209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
23-197
               

               
Cow position:
               
chr11:11044964-11045140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
23-199
               

               
Cow position:
               
chr11:36914658-36914827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
24-228
               

               
Cow position:
               
chr11:60143234-60143450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
24-258
               

               
Cow position:
               
chr11:13592803-13592558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
24-299
               

               
Cow position:
               
chr11:36286763-36286488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
24-332
               

               
Cow position:
               
chr11:49231941-49231631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 87
               

               
Conread position:
               
24-354
               

               
Cow position:
               
chr11:58313307-58312969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
24-364
               

               
Cow position:
               
chr11:40258344-40258679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
24-366
               

               
Cow position:
               
chr11:10620260-10620609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
24-449
               

               
Cow position:
               
chr11:2092402-2091975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
25-353
               

               
Cow position:
               
chr11:24937732-24937392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
25-484
               

               
Cow position:
               
chr11:53313506-53313967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
27-146
               

               
Cow position:
               
chr11:16842919-16843040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
29-307
               

               
Cow position:
               
chr11:61858841-61859118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
29-317
               

               
Cow position:
               
chr11:38874339-38874630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
29-506
               

               
Cow position:
               
chr11:21852240-21852715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 5
               

               
Conread position:
               
32-351
               

               
Cow position:
               
chr11:24008137-24007819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
33-196
               

               
Cow position:
               
chr11:75965593-75965755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
33-240
               

               
Cow position:
               
chr11:11647131-11646907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
33-394
               

               
Cow position:
               
chr11:62019530-62019910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
33-506
               

               
Cow position:
               
chr11:42359173-42358695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
33-506
               

               
Cow position:
               
chr11:67747343-67746852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
34-173
               

               
Cow position:
               
chr11:54218772-54218634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
34-199
               

               
Cow position:
               
chr11:261210-261372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
34-328
               

               
Cow position:
               
chr11:5416942-5416661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
34-353
               

               
Cow position:
               
chr11:70114530-70114208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
34-382
               

               
Cow position:
               
chr11:52132764-52133125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 191
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr11:18588528-18588896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr11:31413516-31413127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
34-469
               

               
Cow position:
               
chr11:6835591-6835152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
34-477
               

               
Cow position:
               
chr11:3780360-3780830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
34-506
               

               
Cow position:
               
chr11:29916599-29916118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
34-506
               

               
Cow position:
               
chr11:33349643-33350129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
34-506
               

               
Cow position:
               
chr11:39115551-39115073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
35-335
               

               
Cow position:
               
chr11:18340984-18341284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
36-207
               

               
Cow position:
               
chr11:81159936-81159762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
36-302
               

               
Cow position:
               
chr11:33286901-33287175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr11:21497578-21497259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
36-496
               

               
Cow position:
               
chr11:44575689-44576157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
36-506
               

               
Cow position:
               
chr11:66733885-66733406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
39-396
               

               
Cow position:
               
chr11:37160841-37160476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
39-397
               

               
Cow position:
               
chr11:30120609-30120979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
40-356
               

               
Cow position:
               
chr11:6400012-6400345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
40-453
               

               
Cow position:
               
chr11:62490490-62490058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
43-320
               

               
Cow position:
               
chr11:21728227-21728499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
43-366
               

               
Cow position:
               
chr11:46580406-46580083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
45-224
               

               
Cow position:
               
chr11:81340459-81340644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
50-174
               

               
Cow position:
               
chr11:1779287-1779413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
50-356
               

               
Cow position:
               
chr11:15632512-15632829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
51-360
               

               
Cow position:
               
chr11:37347512-37347198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
165, 28
               

               
Conread position:
               
55-264
               

               
Cow position:
               
chr11:8936458-8936669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
57-317
               

               
Cow position:
               
chr11:18591399-18591662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
57-339
               

               
Cow position:
               
chr11:36114191-36113906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
57-506
               

               
Cow position:
               
chr11:8339371-8339834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
57-506
               

               
Cow position:
               
chr11:65431089-65430646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
60-506
               

               
Cow position:
               
chr11:6154440-6153986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
63-495
               

               
Cow position:
               
chr11:18388847-18389277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
63-506
               

               
Cow position:
               
chr11:42792944-42793388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
66-506
               

               
Cow position:
               
chr11:38810326-38810760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
67-506
               

               
Cow position:
               
chr11:50197411-50197873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
69-437
               

               
Cow position:
               
chr11:73478629-73478263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
69-486
               

               
Cow position:
               
chr11:83196517-83196092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
69-487
               

               
Cow position:
               
chr11:11752497-11752925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
69-506
               

               
Cow position:
               
chr11:16251224-16251685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
70-196
               

               
Cow position:
               
chr11:33824869-33824996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
70-420
               

               
Cow position:
               
chr11:955386-955021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
73-356
               

               
Cow position:
               
chr11:48932571-48932856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
73-469
               

               
Cow position:
               
chr11:81174900-81174498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
76-387
               

               
Cow position:
               
chr11:25320069-25319744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
77-183
               

               
Cow position:
               
chr11:78203048-78202941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
77-498
               

               
Cow position:
               
chr11:4412010-4412441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 29
               

               
Conread position:
               
83-468
               

               
Cow position:
               
chr11:7333714-7334108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
84-468
               

               
Cow position:
               
chr11:42232613-42232221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
84-472
               

               
Cow position:
               
chr11:49210835-49211229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
85-361
               

               
Cow position:
               
chr11:77208044-77207770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
139, 8
               

               
Conread position:
               
87-321
               

               
Cow position:
               
chr11:2514592-2514825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
87-505
               

               
Cow position:
               
chr11:67950970-67951375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
87-506
               

               
Cow position:
               
chr11:17968580-17969005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
92-323
               

               
Cow position:
               
chr11:35668714-35668953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
92-476
               

               
Cow position:
               
chr11:56796743-56797128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
93-366
               

               
Cow position:
               
chr11:30110958-30110688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
231, 14
               

               
Conread position:
               
93-425
               

               
Cow position:
               
chr11:47165145-47165482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
93-506
               

               
Cow position:
               
chr11:41577024-41577434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
97-437
               

               
Cow position:
               
chr11:53130805-53130455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
103-485
               

               
Cow position:
               
chr11:71846359-71846756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
104-361
               

               
Cow position:
               
chr11:75748420-75748157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 146
               

               
Conread position:
               
107-348
               

               
Cow position:
               
chr11:62045379-62045133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
107-386
               

               
Cow position:
               
chr11:77241353-77241078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
107-409
               

               
Cow position:
               
chr11:35149144-35148839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 35
               

               
Conread position:
               
107-484
               

               
Cow position:
               
chr11:48901099-48901477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
108-337
               

               
Cow position:
               
chr11:62808670-62808897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
108-506
               

               
Cow position:
               
chr11:62749774-62750179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
110-500
               

               
Cow position:
               
chr11:31866580-31866176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 130
               

               
Conread position:
               
117-506
               

               
Cow position:
               
chr11:81066614-81067011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 22
               

               
Conread position:
               
119-473
               

               
Cow position:
               
chr11:65693868-65694233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
132-366
               

               
Cow position:
               
chr11:25165400-25165162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
139-476
               

               
Cow position:
               
chr11:47169053-47169389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
154-349
               

               
Cow position:
               
chr11:80825100-80824902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
155-314
               

               
Cow position:
               
chr11:10364259-10364422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
170-483
               

               
Cow position:
               
chr11:58614569-58614248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
157, 63
               

               
Conread position:
               
173-327
               

               
Cow position:
               
chr11:44575607-44575460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
191-505
               

               
Cow position:
               
chr11:30466730-30467039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 42
               

               
Conread position:
               
193-348
               

               
Cow position:
               
chr11:15608406-15608558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
194-356
               

               
Cow position:
               
chr11:75510347-75510506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
194-429
               

               
Cow position:
               
chr11:82232299-82232071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
195-366
               

               
Cow position:
               
chr11:30172257-30172095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
195-382
               

               
Cow position:
               
chr11:60302076-60302259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
132, 40
               

               
Conread position:
               
195-436
               

               
Cow position:
               
chr11:84890867-84891103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
195-483
               

               
Cow position:
               
chr11:8232686-8232968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
195-506
               

               
Cow position:
               
chr11:41598842-41599168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
196-498
               

               
Cow position:
               
chr11:53860179-53859864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
196-506
               

               
Cow position:
               
chr11:62376554-62376866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
201-483
               

               
Cow position:
               
chr11:78480677-78480393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
202-469
               

               
Cow position:
               
chr11:49873303-49873033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
127, 42
               
Show alignments to all cow chromosomes.