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Cow genome map

           
Conread name:
           
Thy1-THY010121B08
        

               
Conread position:
               
8-352
               

               
Cow position:
               
chr16:38905132-38905477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
9-321
               

               
Cow position:
               
chr16:10592531-10592226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
10-298
               

               
Cow position:
               
chr16:46433225-46433514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
10-506
               

               
Cow position:
               
chr16:51112780-51113282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
11-122
               

               
Cow position:
               
chr16:40540431-40540322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-130
               

               
Cow position:
               
chr16:12324554-12324432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-136
               

               
Cow position:
               
chr16:21370091-21370215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-136
               

               
Cow position:
               
chr16:31149476-31149350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
11-136
               

               
Cow position:
               
chr16:32893727-32893600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-137
               

               
Cow position:
               
chr16:7723800-7723672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-147
               

               
Cow position:
               
chr16:17291923-17292061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-159
               

               
Cow position:
               
chr16:56243788-56243936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
11-160
               

               
Cow position:
               
chr16:7626258-7626109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-173
               

               
Cow position:
               
chr16:46430054-46430217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr16:42977566-42977396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
11-176
               

               
Cow position:
               
chr16:31561854-31561684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-178
               

               
Cow position:
               
chr16:496277-496445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
11-178
               

               
Cow position:
               
chr16:17135823-17135658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
134, 92
               

               
Conread position:
               
11-182
               

               
Cow position:
               
chr16:44239513-44239330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
11-185
               

               
Cow position:
               
chr16:9553156-9552984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
11-186
               

               
Cow position:
               
chr16:12501062-12501239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
11-186
               

               
Cow position:
               
chr16:38091124-38091302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr16:40700638-40700807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr16:50370693-50370517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
11-190
               

               
Cow position:
               
chr16:42241146-42240968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 64
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chr16:11134882-11135064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chr16:53792720-53792901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
11-193
               

               
Cow position:
               
chr16:7980888-7980707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
125, 67
               

               
Conread position:
               
11-194
               

               
Cow position:
               
chr16:19052734-19052554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-194
               

               
Cow position:
               
chr16:33135036-33134856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-194
               

               
Cow position:
               
chr16:34220285-34220098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chr16:3114638-3114451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chr16:30358964-30359147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:2417491-2417677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:8738164-8737977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:16571011-16570827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:17903546-17903737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:21040126-21039940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:21761871-21762059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:22984852-22984670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:32807194-32807380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:34753861-34754048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:41578325-41578138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:45122134-45121951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:48545920-48545733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr16:54226501-54226686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
124, 94
               

               
Conread position:
               
11-197
               

               
Cow position:
               
chr16:22380255-22380442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-198
               

               
Cow position:
               
chr16:40514383-40514571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-199
               

               
Cow position:
               
chr16:7550066-7549876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
11-202
               

               
Cow position:
               
chr16:20069931-20069738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
11-208
               

               
Cow position:
               
chr16:22207177-22206972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
11-209
               

               
Cow position:
               
chr16:31078992-31079190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-216
               

               
Cow position:
               
chr16:55233780-55233574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
157, 94
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr16:39401917-39402123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
11-222
               

               
Cow position:
               
chr16:16933219-16933011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr16:8239770-8240004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
11-244
               

               
Cow position:
               
chr16:10504925-10504682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
11-244
               

               
Cow position:
               
chr16:27160765-27161004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr16:12320320-12320069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr16:17945620-17945369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr16:25387072-25386828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
11-265
               

               
Cow position:
               
chr16:3304122-3303864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-280
               

               
Cow position:
               
chr16:31348667-31348947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 96
               

               
Conread position:
               
11-294
               

               
Cow position:
               
chr16:17289046-17288754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
11-296
               

               
Cow position:
               
chr16:44584340-44584619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 62
               

               
Conread position:
               
11-299
               

               
Cow position:
               
chr16:41696993-41697283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-302
               

               
Cow position:
               
chr16:42345514-42345801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
171, 75
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chr16:52275030-52275330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-308
               

               
Cow position:
               
chr16:45678077-45677774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
11-323
               

               
Cow position:
               
chr16:31117516-31117836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
11-324
               

               
Cow position:
               
chr16:45676764-45677069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
11-326
               

               
Cow position:
               
chr16:42444255-42443935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
11-327
               

               
Cow position:
               
chr16:22773078-22772748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr16:33235065-33235356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr16:36203520-36203836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 6
               

               
Conread position:
               
11-329
               

               
Cow position:
               
chr16:48190914-48191223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
156, 17
               

               
Conread position:
               
11-330
               

               
Cow position:
               
chr16:8065789-8066104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 100
               

               
Conread position:
               
11-334
               

               
Cow position:
               
chr16:14125235-14124930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
11-337
               

               
Cow position:
               
chr16:8811996-8812320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 87
               

               
Conread position:
               
11-337
               

               
Cow position:
               
chr16:29038014-29037683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
11-338
               

               
Cow position:
               
chr16:25839719-25839388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-343
               

               
Cow position:
               
chr16:32301907-32302225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
11-351
               

               
Cow position:
               
chr16:11940136-11939819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
11-351
               

               
Cow position:
               
chr16:14568390-14568734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
11-353
               

               
Cow position:
               
chr16:37452515-37452868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-355
               

               
Cow position:
               
chr16:9985294-9985636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr16:238366-238006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr16:8933329-8933674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr16:14754224-14754577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr16:26649530-26649888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-357
               

               
Cow position:
               
chr16:11615146-11615484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-357
               

               
Cow position:
               
chr16:48493279-48492930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
11-358
               

               
Cow position:
               
chr16:19408429-19408770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-361
               

               
Cow position:
               
chr16:16597656-16597302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-361
               

               
Cow position:
               
chr16:18402785-18402436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
11-361
               

               
Cow position:
               
chr16:27659647-27659986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr16:14242467-14242114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr16:53086242-53086585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr16:5636683-5636326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr16:29096020-29095691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr16:570821-571180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr16:4979901-4979551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
5, 35
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr16:20633777-20634135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
45, 94
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr16:47518945-47518584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr16:48006394-48006755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr16:5257095-5256737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr16:14758834-14758473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr16:47662827-47662447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr16:52889313-52889676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
11-368
               

               
Cow position:
               
chr16:19670254-19670598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
11-380
               

               
Cow position:
               
chr16:14106736-14106365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
11-382
               

               
Cow position:
               
chr16:13689765-13689380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-384
               

               
Cow position:
               
chr16:15960191-15960579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
11-388
               

               
Cow position:
               
chr16:20025540-20025157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 94
               

               
Conread position:
               
11-388
               

               
Cow position:
               
chr16:33054382-33054749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-388
               

               
Cow position:
               
chr16:43505712-43506085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
11-391
               

               
Cow position:
               
chr16:26372852-26373240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
11-398
               

               
Cow position:
               
chr16:48494455-48494856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
11-400
               

               
Cow position:
               
chr16:47820666-47820271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
11-403
               

               
Cow position:
               
chr16:19003434-19003825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-404
               

               
Cow position:
               
chr16:53627329-53627729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
11-413
               

               
Cow position:
               
chr16:37062299-37062710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
11-420
               

               
Cow position:
               
chr16:45813600-45814011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
172, 94
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr16:15809077-15808645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
11-422
               

               
Cow position:
               
chr16:48956897-48956479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 144
               

               
Conread position:
               
11-424
               

               
Cow position:
               
chr16:23472848-23472414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
11-429
               

               
Cow position:
               
chr16:33646114-33645686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-438
               

               
Cow position:
               
chr16:4626292-4626737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-448
               

               
Cow position:
               
chr16:48095666-48096115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-469
               

               
Cow position:
               
chr16:52834789-52835245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-476
               

               
Cow position:
               
chr16:51710039-51710512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 22
               

               
Conread position:
               
11-478
               

               
Cow position:
               
chr16:9973400-9973876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-478
               

               
Cow position:
               
chr16:54679764-54679307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chr16:35188348-35187866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
11-486
               

               
Cow position:
               
chr16:53508886-53509379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
11-488
               

               
Cow position:
               
chr16:33198340-33198858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 82
               

               
Conread position:
               
11-488
               

               
Cow position:
               
chr16:43800820-43801285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
11-489
               

               
Cow position:
               
chr16:4857003-4857480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 91
               

               
Conread position:
               
11-490
               

               
Cow position:
               
chr16:51578342-51578806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
11-493
               

               
Cow position:
               
chr16:25170492-25169995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
11-493
               

               
Cow position:
               
chr16:38708738-38709218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 86
               

               
Conread position:
               
11-498
               

               
Cow position:
               
chr16:56231926-56231419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-499
               

               
Cow position:
               
chr16:18353859-18354350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 95
               

               
Conread position:
               
11-501
               

               
Cow position:
               
chr16:13712834-13713299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-503
               

               
Cow position:
               
chr16:42078749-42079246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chr16:51598514-51599011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 96
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chr16:54579265-54578763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 96
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr16:4059454-4058956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr16:4698889-4699363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr16:7076011-7075498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr16:15824345-15824844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr16:32781462-32780973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 94
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr16:43276117-43275607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:3634215-3633705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:6379026-6379518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:7499149-7498659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:7505183-7504696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:13306773-13307276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:13990074-13989575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:17143033-17142520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:18206058-18205550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:18757740-18758250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:19643988-19643484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 98
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:22804499-22804984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:33704904-33704395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 82
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:37669638-37670156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:40333227-40333732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:40562331-40561815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:42340295-42339790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:46552893-46552396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:48398155-48398654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:51501028-51500523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr16:52170154-52169668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
12-130
               

               
Cow position:
               
chr16:15945158-15945278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
12-155
               

               
Cow position:
               
chr16:12010193-12010047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr16:17282756-17282577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr16:30036324-30036147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr16:38243566-38243749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
12-307
               

               
Cow position:
               
chr16:45554541-45554238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
12-326
               

               
Cow position:
               
chr16:11957480-11957801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
12-342
               

               
Cow position:
               
chr16:10148379-10148043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr16:5363999-5363638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 97
               

               
Conread position:
               
12-363
               

               
Cow position:
               
chr16:935358-935708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
12-366
               

               
Cow position:
               
chr16:44210460-44210811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
12-382
               

               
Cow position:
               
chr16:13578764-13579126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
12-428
               

               
Cow position:
               
chr16:15762059-15762496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
12-437
               

               
Cow position:
               
chr16:30715602-30715149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
12-437
               

               
Cow position:
               
chr16:56185343-56185799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
12-483
               

               
Cow position:
               
chr16:11102724-11103225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
12-504
               

               
Cow position:
               
chr16:42217594-42218102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr16:4910428-4910943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr16:22919565-22919081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr16:49126089-49126594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
13-119
               

               
Cow position:
               
chr16:31484563-31484673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
13-146
               

               
Cow position:
               
chr16:27728357-27728221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-176
               

               
Cow position:
               
chr16:20824574-20824416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-183
               

               
Cow position:
               
chr16:8530785-8530959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
13-192
               

               
Cow position:
               
chr16:50667388-50667202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-196
               

               
Cow position:
               
chr16:9905187-9905003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
13-196
               

               
Cow position:
               
chr16:52133420-52133600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
13-248
               

               
Cow position:
               
chr16:47964722-47964967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
13-249
               

               
Cow position:
               
chr16:5836682-5836430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
13-278
               

               
Cow position:
               
chr16:14974447-14974703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
210, 60
               

               
Conread position:
               
13-366
               

               
Cow position:
               
chr16:23681459-23681107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
13-369
               

               
Cow position:
               
chr16:29608606-29608248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 80
               

               
Conread position:
               
13-469
               

               
Cow position:
               
chr16:24826170-24825693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 95
               

               
Conread position:
               
13-483
               

               
Cow position:
               
chr16:12633981-12633523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
13-498
               

               
Cow position:
               
chr16:7702616-7702126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 43
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chr16:39474055-39474548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
14-144
               

               
Cow position:
               
chr16:17460264-17460131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
14-194
               

               
Cow position:
               
chr16:33595841-33596019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
14-498
               

               
Cow position:
               
chr16:48369856-48370352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 91
               

               
Conread position:
               
14-498
               

               
Cow position:
               
chr16:50417601-50418091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 92
               

               
Conread position:
               
14-499
               

               
Cow position:
               
chr16:11105650-11105147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
14-503
               

               
Cow position:
               
chr16:45139762-45139260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 29
               

               
Conread position:
               
14-506
               

               
Cow position:
               
chr16:18141231-18141735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
15-146
               

               
Cow position:
               
chr16:37401348-37401212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
15-171
               

               
Cow position:
               
chr16:45294640-45294480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
15-187
               

               
Cow position:
               
chr16:30305720-30305893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
123, 90
               

               
Conread position:
               
15-192
               

               
Cow position:
               
chr16:48146564-48146741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
15-207
               

               
Cow position:
               
chr16:29527924-29527726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
15-224
               

               
Cow position:
               
chr16:23955737-23955955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
15-299
               

               
Cow position:
               
chr16:24855634-24855348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 60
               

               
Conread position:
               
15-317
               

               
Cow position:
               
chr16:12060511-12060203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
56, 93
               

               
Conread position:
               
15-334
               

               
Cow position:
               
chr16:8322887-8323214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
15-498
               

               
Cow position:
               
chr16:49229673-49230173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chr16:5415666-5416169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chr16:31122155-31122665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chr16:33226444-33226942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr16:39683007-39683184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
56, 95
               

               
Conread position:
               
16-196
               

               
Cow position:
               
chr16:18052424-18052243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
16-362
               

               
Cow position:
               
chr16:17745930-17745573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
16-367
               

               
Cow position:
               
chr16:8366736-8367091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
16-432
               

               
Cow position:
               
chr16:11791104-11790664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 89
               

               
Conread position:
               
16-506
               

               
Cow position:
               
chr16:32969986-32970481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 63
               

               
Conread position:
               
16-506
               

               
Cow position:
               
chr16:39394663-39394176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
16-506
               

               
Cow position:
               
chr16:49169287-49169790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
17-314
               

               
Cow position:
               
chr16:8068731-8069025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
18-386
               

               
Cow position:
               
chr16:27701167-27701532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
19-316
               

               
Cow position:
               
chr16:41530210-41530500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
19-380
               

               
Cow position:
               
chr16:29766416-29766063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
204, 61
               

               
Conread position:
               
19-433
               

               
Cow position:
               
chr16:11774958-11775385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
19-506
               

               
Cow position:
               
chr16:820340-819851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
19-506
               

               
Cow position:
               
chr16:32327748-32327249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
20-311
               

               
Cow position:
               
chr16:3047250-3047550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
20-311
               

               
Cow position:
               
chr16:4275650-4275950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
21-157
               

               
Cow position:
               
chr16:9597362-9597501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 87
               

               
Conread position:
               
21-505
               

               
Cow position:
               
chr16:48340605-48341098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
24-196
               

               
Cow position:
               
chr16:33267799-33267629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
24-326
               

               
Cow position:
               
chr16:47643500-47643200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
24-328
               

               
Cow position:
               
chr16:49336309-49336006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
200, 51
               

               
Conread position:
               
24-342
               

               
Cow position:
               
chr16:29557545-29557869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
24-350
               

               
Cow position:
               
chr16:11806757-11806433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
24-407
               

               
Cow position:
               
chr16:28833929-28833530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 87
               

               
Conread position:
               
24-448
               

               
Cow position:
               
chr16:39513990-39514437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 223
               

               
Conread position:
               
24-506
               

               
Cow position:
               
chr16:24128791-24128291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
24-506
               

               
Cow position:
               
chr16:39646630-39646149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
25-311
               

               
Cow position:
               
chr16:33753513-33753225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 6
               

               
Conread position:
               
25-337
               

               
Cow position:
               
chr16:33588743-33588435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
174, 53
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr16:38020192-38019977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
26-328
               

               
Cow position:
               
chr16:5351758-5352052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 47
               

               
Conread position:
               
26-387
               

               
Cow position:
               
chr16:23483366-23483004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
26-439
               

               
Cow position:
               
chr16:53428341-53427913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
27-506
               

               
Cow position:
               
chr16:4971944-4972436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 84
               

               
Conread position:
               
28-328
               

               
Cow position:
               
chr16:8325393-8325671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
147, 14
               

               
Conread position:
               
28-506
               

               
Cow position:
               
chr16:45731305-45731781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
29-196
               

               
Cow position:
               
chr16:29677553-29677718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
29-298
               

               
Cow position:
               
chr16:591730-592007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
29-481
               

               
Cow position:
               
chr16:8840973-8840505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
30-328
               

               
Cow position:
               
chr16:33790758-33791065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
33-328
               

               
Cow position:
               
chr16:50289229-50288936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
33-356
               

               
Cow position:
               
chr16:13752055-13752378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
33-360
               

               
Cow position:
               
chr16:4988002-4987689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
33-481
               

               
Cow position:
               
chr16:16402250-16402714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
158, 46
               

               
Conread position:
               
33-506
               

               
Cow position:
               
chr16:5727010-5726518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr16:594148-594459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
34-352
               

               
Cow position:
               
chr16:9729271-9728953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
34-366
               

               
Cow position:
               
chr16:44744057-44744397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
34-506
               

               
Cow position:
               
chr16:2396390-2395925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
35-345
               

               
Cow position:
               
chr16:10039772-10040079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
35-497
               

               
Cow position:
               
chr16:33508147-33507664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
35-506
               

               
Cow position:
               
chr16:675565-675091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
36-227
               

               
Cow position:
               
chr16:45645614-45645817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
36-359
               

               
Cow position:
               
chr16:35195539-35195868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
36-406
               

               
Cow position:
               
chr16:35937411-35937030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
36-498
               

               
Cow position:
               
chr16:50906551-50906066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 121
               

               
Conread position:
               
36-504
               

               
Cow position:
               
chr16:601019-600535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
36-506
               

               
Cow position:
               
chr16:42092315-42092785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
37-506
               

               
Cow position:
               
chr16:41752504-41752992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 68
               

               
Conread position:
               
40-385
               

               
Cow position:
               
chr16:8279722-8280072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
40-437
               

               
Cow position:
               
chr16:9933228-9932813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
40-484
               

               
Cow position:
               
chr16:17606367-17605900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
43-506
               

               
Cow position:
               
chr16:49125466-49125930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 23
               

               
Conread position:
               
43-506
               

               
Cow position:
               
chr16:56853997-56853544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
46-261
               

               
Cow position:
               
chr16:22123906-22124117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
47-323
               

               
Cow position:
               
chr16:51556267-51556520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
51-320
               

               
Cow position:
               
chr16:39238005-39237729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
51-506
               

               
Cow position:
               
chr16:11568064-11568520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
54-328
               

               
Cow position:
               
chr16:45535231-45534962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
57-249
               

               
Cow position:
               
chr16:53037583-53037776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
142, 49
               

               
Conread position:
               
57-351
               

               
Cow position:
               
chr16:21905215-21904920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
59-328
               

               
Cow position:
               
chr16:1725025-1725294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
67-336
               

               
Cow position:
               
chr16:4372453-4372728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
69-317
               

               
Cow position:
               
chr16:12085757-12085991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
70-328
               

               
Cow position:
               
chr16:11274940-11274688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
73-506
               

               
Cow position:
               
chr16:17665667-17665228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
74-495
               

               
Cow position:
               
chr16:56150327-56149914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 16
               

               
Conread position:
               
75-490
               

               
Cow position:
               
chr16:24148193-24147763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
77-506
               

               
Cow position:
               
chr16:18679228-18678787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
83-436
               

               
Cow position:
               
chr16:13791541-13791164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
83-444
               

               
Cow position:
               
chr16:23066687-23066319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
84-506
               

               
Cow position:
               
chr16:4712923-4712492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
87-506
               

               
Cow position:
               
chr16:23990460-23990901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
88-506
               

               
Cow position:
               
chr16:16424591-16425016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 18
               

               
Conread position:
               
91-360
               

               
Cow position:
               
chr16:39704823-39705099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
92-364
               

               
Cow position:
               
chr16:23033866-23033606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
92-376
               

               
Cow position:
               
chr16:39417105-39417384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
106, 14
               

               
Conread position:
               
92-461
               

               
Cow position:
               
chr16:44973509-44973123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
93-328
               

               
Cow position:
               
chr16:35168744-35168504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
93-386
               

               
Cow position:
               
chr16:27005217-27004918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
96-469
               

               
Cow position:
               
chr16:28111909-28112288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
107-490
               

               
Cow position:
               
chr16:4103161-4103554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
107-506
               

               
Cow position:
               
chr16:51399750-51400157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
147, 25
               

               
Conread position:
               
108-504
               

               
Cow position:
               
chr16:39385410-39384992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 148
               

               
Conread position:
               
111-444
               

               
Cow position:
               
chr16:28192067-28191721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 114
               

               
Conread position:
               
115-480
               

               
Cow position:
               
chr16:5293639-5293275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
127-469
               

               
Cow position:
               
chr16:43742962-43743302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
127-506
               

               
Cow position:
               
chr16:8621217-8620842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
130-506
               

               
Cow position:
               
chr16:49141588-49141969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
139-382
               

               
Cow position:
               
chr16:56198492-56198235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 102
               

               
Conread position:
               
141-329
               

               
Cow position:
               
chr16:16544036-16543850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr16:33752161-33751912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 52
               

               
Conread position:
               
146-473
               

               
Cow position:
               
chr16:54294964-54294629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
176, 82
               

               
Conread position:
               
155-405
               

               
Cow position:
               
chr16:32384868-32385129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
169-484
               

               
Cow position:
               
chr16:17867547-17867847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
170-400
               

               
Cow position:
               
chr16:14799819-14800042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
158, 71
               

               
Conread position:
               
170-475
               

               
Cow position:
               
chr16:37442201-37442510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
149, 63
               

               
Conread position:
               
171-356
               

               
Cow position:
               
chr16:901959-902142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
159, 14
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr16:52802565-52802419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
181-386
               

               
Cow position:
               
chr16:44688367-44688564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 29
               

               
Conread position:
               
187-366
               

               
Cow position:
               
chr16:13043707-13043532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
138, 46
               

               
Conread position:
               
199-483
               

               
Cow position:
               
chr16:7426968-7427253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
201-448
               

               
Cow position:
               
chr16:54227830-54228080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 32
               
Show alignments to all cow chromosomes.