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Cow genome map

           
Conread name:
           
Thy1-THY010121B08
        

               
Conread position:
               
10-136
               

               
Cow position:
               
chr19:40002268-40002396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
10-196
               

               
Cow position:
               
chr19:47986947-47986757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr19:25035567-25035348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
10-344
               

               
Cow position:
               
chr19:22798989-22799334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
10-477
               

               
Cow position:
               
chr19:12711787-12712273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 98
               

               
Conread position:
               
11-115
               

               
Cow position:
               
chr19:25832112-25832218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-122
               

               
Cow position:
               
chr19:25835243-25835353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-130
               

               
Cow position:
               
chr19:18892030-18892151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 97
               

               
Conread position:
               
11-135
               

               
Cow position:
               
chr19:24638583-24638706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
11-135
               

               
Cow position:
               
chr19:39060610-39060732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
11-136
               

               
Cow position:
               
chr19:6154505-6154638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
11-136
               

               
Cow position:
               
chr19:12705751-12705879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-136
               

               
Cow position:
               
chr19:38732226-38732099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-138
               

               
Cow position:
               
chr19:24253212-24253341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-139
               

               
Cow position:
               
chr19:10930331-10930459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
11-140
               

               
Cow position:
               
chr19:26269147-26269272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
11-141
               

               
Cow position:
               
chr19:23756655-23756787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-148
               

               
Cow position:
               
chr19:24664438-24664575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
128, 94
               

               
Conread position:
               
11-151
               

               
Cow position:
               
chr19:28135649-28135510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
11-151
               

               
Cow position:
               
chr19:28810229-28810373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
11-155
               

               
Cow position:
               
chr19:23088071-23087926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-161
               

               
Cow position:
               
chr19:10238824-10238671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-164
               

               
Cow position:
               
chr19:33988156-33987997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
11-169
               

               
Cow position:
               
chr19:42236115-42235955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 100
               

               
Conread position:
               
11-170
               

               
Cow position:
               
chr19:33913614-33913451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-173
               

               
Cow position:
               
chr19:3497864-3498029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
11-174
               

               
Cow position:
               
chr19:28447527-28447363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr19:8965350-8965184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr19:47184995-47185160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
11-178
               

               
Cow position:
               
chr19:10735073-10735233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
11-178
               

               
Cow position:
               
chr19:13488413-13488586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
58, 99
               

               
Conread position:
               
11-183
               

               
Cow position:
               
chr19:7147978-7148151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
11-184
               

               
Cow position:
               
chr19:12052763-12052934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 46
               

               
Conread position:
               
11-184
               

               
Cow position:
               
chr19:12067828-12067657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 46
               

               
Conread position:
               
11-188
               

               
Cow position:
               
chr19:23889400-23889572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-188
               

               
Cow position:
               
chr19:34420496-34420321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
137, 67
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chr19:39781607-39781421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chr19:49221534-49221710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-193
               

               
Cow position:
               
chr19:25853661-25853472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 101
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr19:3834360-3834176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr19:4800829-4800644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr19:12747689-12747874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr19:23378763-23378588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr19:42517168-42517356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr19:52158627-52158436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
11-197
               

               
Cow position:
               
chr19:52187572-52187390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
11-199
               

               
Cow position:
               
chr19:23394872-23394683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
11-200
               

               
Cow position:
               
chr19:10929529-10929337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
11-204
               

               
Cow position:
               
chr19:40127079-40127273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-214
               

               
Cow position:
               
chr19:19489745-19489948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-214
               

               
Cow position:
               
chr19:37466974-37467178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-214
               

               
Cow position:
               
chr19:37633138-37633326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chr19:38500251-38500037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 94
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr19:15853014-15852801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
164, 63
               

               
Conread position:
               
11-237
               

               
Cow position:
               
chr19:25628049-25628286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-237
               

               
Cow position:
               
chr19:47453519-47453283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr19:15092049-15092283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
135, 62
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr19:39485405-39485163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
11-248
               

               
Cow position:
               
chr19:25807220-25807465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
11-258
               

               
Cow position:
               
chr19:24759797-24760057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
11-259
               

               
Cow position:
               
chr19:22043269-22043528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
11-260
               

               
Cow position:
               
chr19:15719531-15719791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-285
               

               
Cow position:
               
chr19:10242665-10242395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
186, 16
               

               
Conread position:
               
11-299
               

               
Cow position:
               
chr19:16104993-16105265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-300
               

               
Cow position:
               
chr19:25655139-25655442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
11-310
               

               
Cow position:
               
chr19:34166454-34166150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
11-313
               

               
Cow position:
               
chr19:23784332-23784618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
11-313
               

               
Cow position:
               
chr19:42904096-42903802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
11-315
               

               
Cow position:
               
chr19:16621270-16621574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
187, 62
               

               
Conread position:
               
11-315
               

               
Cow position:
               
chr19:55688610-55688922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
11-322
               

               
Cow position:
               
chr19:20984686-20984996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
11-327
               

               
Cow position:
               
chr19:36245407-36245717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr19:1664103-1664426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr19:5115792-5116099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr19:20310552-20310862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 62
               

               
Conread position:
               
11-335
               

               
Cow position:
               
chr19:33903339-33903661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
174, 94
               

               
Conread position:
               
11-337
               

               
Cow position:
               
chr19:35762163-35762495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
11-339
               

               
Cow position:
               
chr19:43413870-43413535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
11-346
               

               
Cow position:
               
chr19:3621516-3621172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
11-349
               

               
Cow position:
               
chr19:5912874-5913205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
198, 6
               

               
Conread position:
               
11-350
               

               
Cow position:
               
chr19:51185509-51185166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
11-353
               

               
Cow position:
               
chr19:48723110-48722763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
11-355
               

               
Cow position:
               
chr19:33469108-33468759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr19:1968229-1968570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr19:10186589-10186234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 94
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr19:19919375-19919723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
11-359
               

               
Cow position:
               
chr19:3811932-3812284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
159, 68
               

               
Conread position:
               
11-359
               

               
Cow position:
               
chr19:10545617-10545977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr19:10213759-10213401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr19:15887233-15887592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
62, 99
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr19:41585056-41584704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr19:55952074-55952413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr19:36060025-36059660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-363
               

               
Cow position:
               
chr19:4503307-4502947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
114, 94
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr19:10081162-10080795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr19:41024311-41023955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
11-365
               

               
Cow position:
               
chr19:47671831-47671477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr19:36845337-36844973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr19:39361231-39360864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr19:31846463-31846819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr19:51230737-51231096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
11-374
               

               
Cow position:
               
chr19:25652673-25653042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
187, 61
               

               
Conread position:
               
11-382
               

               
Cow position:
               
chr19:16693944-16694339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
11-390
               

               
Cow position:
               
chr19:8332387-8331995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-392
               

               
Cow position:
               
chr19:3496087-3496478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
62, 6
               

               
Conread position:
               
11-405
               

               
Cow position:
               
chr19:7884665-7884241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
11-406
               

               
Cow position:
               
chr19:7668781-7668382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
11-412
               

               
Cow position:
               
chr19:4587651-4588048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
11-416
               

               
Cow position:
               
chr19:12601892-12601480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
207, 67
               

               
Conread position:
               
11-428
               

               
Cow position:
               
chr19:46454934-46454506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-435
               

               
Cow position:
               
chr19:31595388-31594948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
11-437
               

               
Cow position:
               
chr19:43058613-43058179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
185, 22
               

               
Conread position:
               
11-446
               

               
Cow position:
               
chr19:54943055-54942615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
11-458
               

               
Cow position:
               
chr19:41946270-41945838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-469
               

               
Cow position:
               
chr19:34619942-34620416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
11-476
               

               
Cow position:
               
chr19:44143848-44144297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
11-483
               

               
Cow position:
               
chr19:24669291-24669767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chr19:53542812-53543272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-485
               

               
Cow position:
               
chr19:16567239-16566758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
11-486
               

               
Cow position:
               
chr19:53623646-53623163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 42
               

               
Conread position:
               
11-495
               

               
Cow position:
               
chr19:33033352-33033863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chr19:12698406-12697907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 87
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chr19:21199226-21198706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chr19:23304403-23304925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 95
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chr19:39576481-39576989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chr19:56383242-56382729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr19:268441-267925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:5185168-5185671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 68
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:5656037-5656531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:7053254-7053747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:7637148-7637643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:8375215-8375721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:14253719-14253213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 100
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:15862963-15863478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:17795983-17795473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 62
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:20670819-20671326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:22765708-22765196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:30232798-30232323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 75
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:32457730-32457221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 47
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:35018158-35018667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 95
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:36125674-36125166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:39057332-39056823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:42695082-42694590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:43431240-43431740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:46180761-46181229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 34
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr19:55967615-55968109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
12-121
               

               
Cow position:
               
chr19:4117277-4117389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
12-136
               

               
Cow position:
               
chr19:34608114-34608237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
12-156
               

               
Cow position:
               
chr19:1853958-1854101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
127, 84
               

               
Conread position:
               
12-158
               

               
Cow position:
               
chr19:10538465-10538613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chr19:25763197-25763029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
119, 93
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chr19:18054170-18054340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chr19:34757916-34758097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr19:13757337-13757150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr19:14631953-14632134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr19:46094550-46094796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
12-258
               

               
Cow position:
               
chr19:25526369-25526113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
12-306
               

               
Cow position:
               
chr19:32506031-32506320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 235
               

               
Conread position:
               
12-360
               

               
Cow position:
               
chr19:29368482-29368129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
12-360
               

               
Cow position:
               
chr19:29625987-29625635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr19:2577645-2577253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr19:26057460-26057883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 102
               

               
Conread position:
               
12-443
               

               
Cow position:
               
chr19:25726795-25727237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
12-504
               

               
Cow position:
               
chr19:15067921-15068413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 97
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr19:24062363-24061876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
13-172
               

               
Cow position:
               
chr19:11646652-11646497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
13-174
               

               
Cow position:
               
chr19:11559953-11560120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
13-200
               

               
Cow position:
               
chr19:750291-750106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
13-222
               

               
Cow position:
               
chr19:32505670-32505883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
13-248
               

               
Cow position:
               
chr19:52480070-52479834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
13-322
               

               
Cow position:
               
chr19:34001292-34000984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-339
               

               
Cow position:
               
chr19:22134067-22134387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
13-341
               

               
Cow position:
               
chr19:11565068-11565396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
13-351
               

               
Cow position:
               
chr19:6049591-6049922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
183, 92
               

               
Conread position:
               
13-354
               

               
Cow position:
               
chr19:1153291-1152960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
13-381
               

               
Cow position:
               
chr19:9541814-9542190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
13-394
               

               
Cow position:
               
chr19:990329-990711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
113, 90
               

               
Conread position:
               
13-397
               

               
Cow position:
               
chr19:13129955-13129585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
13-464
               

               
Cow position:
               
chr19:17273655-17274095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 65
               

               
Conread position:
               
13-498
               

               
Cow position:
               
chr19:20661330-20661829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 66
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chr19:18786237-18786746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chr19:56149978-56150479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
14-188
               

               
Cow position:
               
chr19:33575607-33575432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
65, 95
               

               
Conread position:
               
14-196
               

               
Cow position:
               
chr19:33981040-33980862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
14-326
               

               
Cow position:
               
chr19:44490178-44489862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
14-366
               

               
Cow position:
               
chr19:13316337-13316677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
14-382
               

               
Cow position:
               
chr19:35742246-35741863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
14-477
               

               
Cow position:
               
chr19:55358125-55357666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
136, 19
               

               
Conread position:
               
14-506
               

               
Cow position:
               
chr19:8128389-8127895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
15-196
               

               
Cow position:
               
chr19:2220992-2221177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
15-215
               

               
Cow position:
               
chr19:6891364-6891563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
15-248
               

               
Cow position:
               
chr19:41497563-41497793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
15-365
               

               
Cow position:
               
chr19:21378386-21378740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
15-376
               

               
Cow position:
               
chr19:17478878-17479248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
15-437
               

               
Cow position:
               
chr19:14593139-14592701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
15-483
               

               
Cow position:
               
chr19:36976830-36977314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
15-485
               

               
Cow position:
               
chr19:47110124-47109633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 20
               

               
Conread position:
               
15-496
               

               
Cow position:
               
chr19:43702618-43703106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
15-498
               

               
Cow position:
               
chr19:39751560-39751063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
15-505
               

               
Cow position:
               
chr19:23222713-23222223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 97
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chr19:43441251-43440747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
16-196
               

               
Cow position:
               
chr19:48744187-48744366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
16-201
               

               
Cow position:
               
chr19:11212316-11212503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
16-416
               

               
Cow position:
               
chr19:30534010-30533610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
17-148
               

               
Cow position:
               
chr19:45396436-45396570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
17-196
               

               
Cow position:
               
chr19:28924838-28924660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 94
               

               
Conread position:
               
17-360
               

               
Cow position:
               
chr19:21363356-21363711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
17-506
               

               
Cow position:
               
chr19:8033829-8033317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
17-506
               

               
Cow position:
               
chr19:36722390-36721913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
18-482
               

               
Cow position:
               
chr19:24358163-24358624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
18-505
               

               
Cow position:
               
chr19:51400934-51401431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
19-207
               

               
Cow position:
               
chr19:3870685-3870495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
20-256
               

               
Cow position:
               
chr19:44838853-44839085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
157, 37
               

               
Conread position:
               
20-366
               

               
Cow position:
               
chr19:14348091-14347734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
20-471
               

               
Cow position:
               
chr19:23832515-23832946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 169
               

               
Conread position:
               
20-472
               

               
Cow position:
               
chr19:3084129-3084589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
20-478
               

               
Cow position:
               
chr19:16096476-16096948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
21-249
               

               
Cow position:
               
chr19:34288099-34287861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
24-137
               

               
Cow position:
               
chr19:14506979-14507091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
24-298
               

               
Cow position:
               
chr19:22449852-22450134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 86
               

               
Conread position:
               
25-395
               

               
Cow position:
               
chr19:41211986-41212355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
180, 20
               

               
Conread position:
               
29-476
               

               
Cow position:
               
chr19:53738403-53737946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
29-506
               

               
Cow position:
               
chr19:22779280-22778782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
32-450
               

               
Cow position:
               
chr19:34425645-34425219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 73
               

               
Conread position:
               
33-307
               

               
Cow position:
               
chr19:48960463-48960179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
33-356
               

               
Cow position:
               
chr19:6079296-6079615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
190, 72
               

               
Conread position:
               
33-388
               

               
Cow position:
               
chr19:24145083-24144720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
33-482
               

               
Cow position:
               
chr19:29627325-29627764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
191, 46
               

               
Conread position:
               
33-483
               

               
Cow position:
               
chr19:2734515-2734054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
33-483
               

               
Cow position:
               
chr19:25999683-25999237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
33-504
               

               
Cow position:
               
chr19:2589565-2589096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
33-505
               

               
Cow position:
               
chr19:42240230-42240710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 40
               

               
Conread position:
               
34-196
               

               
Cow position:
               
chr19:8599250-8599414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
34-229
               

               
Cow position:
               
chr19:6601646-6601851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
34-382
               

               
Cow position:
               
chr19:26087259-26086901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
34-496
               

               
Cow position:
               
chr19:14472718-14473189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
34-505
               

               
Cow position:
               
chr19:34955634-34956117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
34-506
               

               
Cow position:
               
chr19:38842495-38842966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
36-317
               

               
Cow position:
               
chr19:35846963-35846674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
36-407
               

               
Cow position:
               
chr19:33912562-33912955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
36-417
               

               
Cow position:
               
chr19:39245962-39245567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
36-483
               

               
Cow position:
               
chr19:31824951-31825423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
36-484
               

               
Cow position:
               
chr19:1355665-1355213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
39-366
               

               
Cow position:
               
chr19:11376344-11376681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
39-408
               

               
Cow position:
               
chr19:17664699-17664324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
39-472
               

               
Cow position:
               
chr19:38907297-38907733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
43-328
               

               
Cow position:
               
chr19:32754582-32754282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
43-356
               

               
Cow position:
               
chr19:38812756-38812473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
283, 36
               

               
Conread position:
               
43-386
               

               
Cow position:
               
chr19:18750020-18750379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
43-465
               

               
Cow position:
               
chr19:47118445-47118860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 36
               

               
Conread position:
               
44-197
               

               
Cow position:
               
chr19:25954684-25954838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
45-460
               

               
Cow position:
               
chr19:1505178-1504770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
50-195
               

               
Cow position:
               
chr19:35756684-35756536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
50-201
               

               
Cow position:
               
chr19:19665375-19665526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
50-360
               

               
Cow position:
               
chr19:10706322-10706016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
50-363
               

               
Cow position:
               
chr19:33823367-33823044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
50-503
               

               
Cow position:
               
chr19:31874169-31873688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
31, 156
               

               
Conread position:
               
53-184
               

               
Cow position:
               
chr19:14469988-14470124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 57
               

               
Conread position:
               
54-506
               

               
Cow position:
               
chr19:37646792-37647262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
57-196
               

               
Cow position:
               
chr19:19549504-19549647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
61-328
               

               
Cow position:
               
chr19:11758582-11758833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
62-506
               

               
Cow position:
               
chr19:23786227-23785769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
70-328
               

               
Cow position:
               
chr19:32451110-32450846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
71-506
               

               
Cow position:
               
chr19:53463169-53463590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 35
               

               
Conread position:
               
72-403
               

               
Cow position:
               
chr19:33882148-33882469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
73-352
               

               
Cow position:
               
chr19:905003-904721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
74-506
               

               
Cow position:
               
chr19:46822477-46822023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
75-402
               

               
Cow position:
               
chr19:33858749-33858442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
250, 31
               

               
Conread position:
               
75-463
               

               
Cow position:
               
chr19:20693520-20693105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
77-506
               

               
Cow position:
               
chr19:36176767-36176318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
79-416
               

               
Cow position:
               
chr19:28921843-28921500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
87-307
               

               
Cow position:
               
chr19:38723837-38724061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
91-356
               

               
Cow position:
               
chr19:35076480-35076753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
91-471
               

               
Cow position:
               
chr19:18788100-18788488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
91-505
               

               
Cow position:
               
chr19:38392809-38392378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
93-347
               

               
Cow position:
               
chr19:10286898-10286654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
93-382
               

               
Cow position:
               
chr19:53645423-53645708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
93-505
               

               
Cow position:
               
chr19:55724697-55725115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
152, 14
               

               
Conread position:
               
95-501
               

               
Cow position:
               
chr19:35622358-35621951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 11
               

               
Conread position:
               
107-506
               

               
Cow position:
               
chr19:39698053-39697651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
110-323
               

               
Cow position:
               
chr19:2349267-2349484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
134-448
               

               
Cow position:
               
chr19:19673377-19673055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 83
               

               
Conread position:
               
137-506
               

               
Cow position:
               
chr19:34654631-34654997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
138-455
               

               
Cow position:
               
chr19:5934490-5934800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
141-498
               

               
Cow position:
               
chr19:54294632-54294997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
144-506
               

               
Cow position:
               
chr19:48409464-48409089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
145-356
               

               
Cow position:
               
chr19:25572399-25572180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
149-476
               

               
Cow position:
               
chr19:25637548-25637883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
155-505
               

               
Cow position:
               
chr19:28038695-28039038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 85
               

               
Conread position:
               
170-483
               

               
Cow position:
               
chr19:30746318-30746003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
171-337
               

               
Cow position:
               
chr19:34911800-34911644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
194-435
               

               
Cow position:
               
chr19:25025604-25025836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
196-486
               

               
Cow position:
               
chr19:38756184-38755899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
198-506
               

               
Cow position:
               
chr19:24956556-24956850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 35
               
Show alignments to all cow chromosomes.