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Cow genome map

           
Conread name:
           
Thy1-THY010121B08
        

               
Conread position:
               
3-506
               

               
Cow position:
               
chr4:16601965-16602472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 12
               

               
Conread position:
               
10-131
               

               
Cow position:
               
chr4:34653778-34653901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr4:39609809-39609638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
10-214
               

               
Cow position:
               
chr4:19578479-19578277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr4:28771975-28772339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr4:44613096-44612731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 5
               

               
Conread position:
               
10-506
               

               
Cow position:
               
chr4:4186212-4185703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
11-102
               

               
Cow position:
               
chr4:37991680-37991589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-112
               

               
Cow position:
               
chr4:39007595-39007495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-113
               

               
Cow position:
               
chr4:13995474-13995374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
11-120
               

               
Cow position:
               
chr4:60527271-60527160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-122
               

               
Cow position:
               
chr4:33838712-33838822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-124
               

               
Cow position:
               
chr4:50676082-50676194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-125
               

               
Cow position:
               
chr4:21506865-21506981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-126
               

               
Cow position:
               
chr4:58305815-58305931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 96
               

               
Conread position:
               
11-126
               

               
Cow position:
               
chr4:60442952-60443066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-132
               

               
Cow position:
               
chr4:29317985-29318108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-132
               

               
Cow position:
               
chr4:34983408-34983529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
11-134
               

               
Cow position:
               
chr4:10472283-10472155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
11-135
               

               
Cow position:
               
chr4:386305-386427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
11-135
               

               
Cow position:
               
chr4:44854200-44854325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-136
               

               
Cow position:
               
chr4:36744669-36744543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 95
               

               
Conread position:
               
11-136
               

               
Cow position:
               
chr4:65753159-65753287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 98
               

               
Conread position:
               
11-136
               

               
Cow position:
               
chr4:68590862-68590740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
11-137
               

               
Cow position:
               
chr4:48381469-48381343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
117, 94
               

               
Conread position:
               
11-138
               

               
Cow position:
               
chr4:56336756-56336628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
11-145
               

               
Cow position:
               
chr4:12441985-12441848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
11-145
               

               
Cow position:
               
chr4:13241715-13241578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
11-145
               

               
Cow position:
               
chr4:59002049-59002184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
11-146
               

               
Cow position:
               
chr4:38209884-38210023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-146
               

               
Cow position:
               
chr4:44903382-44903248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
11-146
               

               
Cow position:
               
chr4:60506363-60506229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 62
               

               
Conread position:
               
11-151
               

               
Cow position:
               
chr4:19431605-19431748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
11-163
               

               
Cow position:
               
chr4:17851162-17851315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-167
               

               
Cow position:
               
chr4:42176383-42176538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-168
               

               
Cow position:
               
chr4:54541547-54541708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-171
               

               
Cow position:
               
chr4:68456830-68456989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
11-173
               

               
Cow position:
               
chr4:34509931-34509766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
11-173
               

               
Cow position:
               
chr4:45706130-45705973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-174
               

               
Cow position:
               
chr4:46435415-46435249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr4:61478696-61478527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-176
               

               
Cow position:
               
chr4:26830797-26830627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
11-177
               

               
Cow position:
               
chr4:19324065-19323896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-178
               

               
Cow position:
               
chr4:60719192-60719022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-180
               

               
Cow position:
               
chr4:8182546-8182719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
11-180
               

               
Cow position:
               
chr4:69290652-69290818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-182
               

               
Cow position:
               
chr4:46566379-46566555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
11-183
               

               
Cow position:
               
chr4:12901467-12901639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 100
               

               
Conread position:
               
11-183
               

               
Cow position:
               
chr4:26012491-26012314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr4:49826342-49826167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr4:61188779-61188956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr4:66136517-66136691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-193
               

               
Cow position:
               
chr4:19102791-19102977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-194
               

               
Cow position:
               
chr4:61066856-61066681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
131, 60
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chr4:19098563-19098370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr4:25537638-25537450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr4:34503386-34503197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr4:37313256-37313074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr4:38156997-38157186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr4:44449418-44449599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
127, 94
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chr4:47510475-47510295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-197
               

               
Cow position:
               
chr4:32693879-32693688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
11-199
               

               
Cow position:
               
chr4:45636257-45636065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-202
               

               
Cow position:
               
chr4:10851360-10851549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
11-213
               

               
Cow position:
               
chr4:69455537-69455735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
11-214
               

               
Cow position:
               
chr4:65463418-65463611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
177, 77
               

               
Conread position:
               
11-229
               

               
Cow position:
               
chr4:68889470-68889698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
11-233
               

               
Cow position:
               
chr4:20184792-20184568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
141, 84
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr4:20027013-20027247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chr4:54927349-54927586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-237
               

               
Cow position:
               
chr4:34022494-34022736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
11-238
               

               
Cow position:
               
chr4:54524254-54524480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 31
               

               
Conread position:
               
11-248
               

               
Cow position:
               
chr4:11496560-11496792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr4:19501001-19501244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-255
               

               
Cow position:
               
chr4:17774259-17774519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr4:54478831-54479075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
180, 58
               

               
Conread position:
               
11-278
               

               
Cow position:
               
chr4:17186260-17186535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
64, 96
               

               
Conread position:
               
11-287
               

               
Cow position:
               
chr4:59378000-59377713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-298
               

               
Cow position:
               
chr4:54111832-54111545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
11-305
               

               
Cow position:
               
chr4:16594173-16593878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
11-306
               

               
Cow position:
               
chr4:38944167-38944471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chr4:1026146-1026436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
11-308
               

               
Cow position:
               
chr4:28839708-28839418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
11-320
               

               
Cow position:
               
chr4:59277389-59277700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-325
               

               
Cow position:
               
chr4:24810360-24810672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
11-327
               

               
Cow position:
               
chr4:2602321-2602003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
11-327
               

               
Cow position:
               
chr4:42921769-42922073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
184, 94
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr4:7808662-7808354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 62
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr4:29291605-29291294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr4:36290715-36290379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr4:58880870-58881195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr4:64192097-64192399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
11-337
               

               
Cow position:
               
chr4:26659391-26659065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
11-346
               

               
Cow position:
               
chr4:63964900-63965243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 96
               

               
Conread position:
               
11-348
               

               
Cow position:
               
chr4:29805283-29805615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
232, 62
               

               
Conread position:
               
11-350
               

               
Cow position:
               
chr4:20157326-20157669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
11-351
               

               
Cow position:
               
chr4:45367830-45367479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
11-351
               

               
Cow position:
               
chr4:45583032-45583385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
184, 67
               

               
Conread position:
               
11-354
               

               
Cow position:
               
chr4:3283356-3283709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-355
               

               
Cow position:
               
chr4:41867526-41867183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
11-355
               

               
Cow position:
               
chr4:63095983-63096336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr4:47348917-47348570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
142, 95
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chr4:66547677-66548015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
11-358
               

               
Cow position:
               
chr4:27530209-27529849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-359
               

               
Cow position:
               
chr4:34641636-34641994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
11-359
               

               
Cow position:
               
chr4:35982089-35981724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr4:19700186-19699833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 96
               

               
Conread position:
               
11-361
               

               
Cow position:
               
chr4:34630989-34630635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr4:46597459-46597115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
212, 66
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr4:54937986-54937618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr4:59785413-59785048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
63, 100
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr4:3341043-3340681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr4:4320900-4321276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr4:3837366-3837004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr4:36755830-36755477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr4:41185829-41186174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
265, 53
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr4:46591758-46591390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr4:5460770-5461126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chr4:21874893-21874561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-379
               

               
Cow position:
               
chr4:45775247-45775628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-381
               

               
Cow position:
               
chr4:39128628-39128242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
115, 67
               

               
Conread position:
               
11-382
               

               
Cow position:
               
chr4:45662422-45662790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
11-382
               

               
Cow position:
               
chr4:48961395-48961780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
11-382
               

               
Cow position:
               
chr4:51728170-51727793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
11-386
               

               
Cow position:
               
chr4:19744966-19744597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
11-390
               

               
Cow position:
               
chr4:2141827-2141451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
11-395
               

               
Cow position:
               
chr4:19582527-19582918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
67, 97
               

               
Conread position:
               
11-399
               

               
Cow position:
               
chr4:54455252-54455637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-402
               

               
Cow position:
               
chr4:36731281-36730880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
68, 97
               

               
Conread position:
               
11-404
               

               
Cow position:
               
chr4:45738384-45738795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 97
               

               
Conread position:
               
11-405
               

               
Cow position:
               
chr4:23600258-23599856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-414
               

               
Cow position:
               
chr4:37935194-37935607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-420
               

               
Cow position:
               
chr4:508818-509230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
11-420
               

               
Cow position:
               
chr4:22009967-22010390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
11-433
               

               
Cow position:
               
chr4:56239769-56240191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
11-434
               

               
Cow position:
               
chr4:42423714-42424146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-434
               

               
Cow position:
               
chr4:48486085-48485647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-435
               

               
Cow position:
               
chr4:44782465-44782027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-437
               

               
Cow position:
               
chr4:60897192-60897622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-442
               

               
Cow position:
               
chr4:62983471-62983891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 54
               

               
Conread position:
               
11-449
               

               
Cow position:
               
chr4:4085020-4085490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 104
               

               
Conread position:
               
11-449
               

               
Cow position:
               
chr4:17111783-17112239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
11-464
               

               
Cow position:
               
chr4:21874266-21873822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
11-469
               

               
Cow position:
               
chr4:36841356-36840899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 6
               

               
Conread position:
               
11-476
               

               
Cow position:
               
chr4:46476855-46477326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
11-476
               

               
Cow position:
               
chr4:58248492-58248024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
11-478
               

               
Cow position:
               
chr4:38952644-38952169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chr4:32259752-32260243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chr4:45919124-45918637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chr4:49794750-49794286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 62
               

               
Conread position:
               
11-485
               

               
Cow position:
               
chr4:21003-20529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-487
               

               
Cow position:
               
chr4:243321-242828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-488
               

               
Cow position:
               
chr4:12903912-12903417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 242
               

               
Conread position:
               
11-489
               

               
Cow position:
               
chr4:38935449-38934978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
11-491
               

               
Cow position:
               
chr4:68387883-68387392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
11-496
               

               
Cow position:
               
chr4:19435346-19434852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
11-496
               

               
Cow position:
               
chr4:63459132-63459623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-497
               

               
Cow position:
               
chr4:12591123-12591618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-498
               

               
Cow position:
               
chr4:3688019-3687515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
11-498
               

               
Cow position:
               
chr4:4319060-4319552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 98
               

               
Conread position:
               
11-498
               

               
Cow position:
               
chr4:48152284-48152780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 59
               

               
Conread position:
               
11-499
               

               
Cow position:
               
chr4:65650043-65650532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chr4:53100892-53100393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chr4:9815256-9815767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:3268274-3268725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:3421713-3421228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:8413032-8413527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:10732314-10731801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:11871831-11872331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 98
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:19097378-19096879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:20327618-20328131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:21531553-21532047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:22744390-22743921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:23646771-23647252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 21
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:23656061-23655577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 95
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:24001876-24002387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:25879481-25878980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:30974424-30973928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:31136846-31136336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:36893450-36892938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:51784270-51783757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 98
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:51851303-51850781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:51899097-51898585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:54191180-54190690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:61391136-61391617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chr4:65919699-65919205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 94
               

               
Conread position:
               
12-165
               

               
Cow position:
               
chr4:65131363-65131519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr4:34369360-34369547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
12-200
               

               
Cow position:
               
chr4:54921001-54921187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
12-322
               

               
Cow position:
               
chr4:16762637-16762954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
12-340
               

               
Cow position:
               
chr4:13941546-13941224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
12-466
               

               
Cow position:
               
chr4:46058687-46059118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
217, 48
               

               
Conread position:
               
12-476
               

               
Cow position:
               
chr4:19315918-19316371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 93
               

               
Conread position:
               
12-496
               

               
Cow position:
               
chr4:46527091-46526592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
12-498
               

               
Cow position:
               
chr4:33433166-33433666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
12-504
               

               
Cow position:
               
chr4:22101176-22101680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr4:3850641-3850134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr4:21257034-21257544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr4:23526782-23526273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chr4:27997777-27997265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
13-131
               

               
Cow position:
               
chr4:16221788-16221909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-164
               

               
Cow position:
               
chr4:28701447-28701291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-168
               

               
Cow position:
               
chr4:36517394-36517553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
13-168
               

               
Cow position:
               
chr4:49800780-49800626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
13-170
               

               
Cow position:
               
chr4:20141883-20142036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
13-175
               

               
Cow position:
               
chr4:61235116-61235277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
13-178
               

               
Cow position:
               
chr4:13990870-13991032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
13-194
               

               
Cow position:
               
chr4:52831928-52832111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
13-196
               

               
Cow position:
               
chr4:11380368-11380190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
13-196
               

               
Cow position:
               
chr4:17084249-17084436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
13-216
               

               
Cow position:
               
chr4:8944-9148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
13-237
               

               
Cow position:
               
chr4:48409180-48409415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
13-298
               

               
Cow position:
               
chr4:19407909-19408198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
13-306
               

               
Cow position:
               
chr4:51769192-51768906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
233, 92
               

               
Conread position:
               
13-323
               

               
Cow position:
               
chr4:46487752-46488059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
13-326
               

               
Cow position:
               
chr4:22860622-22860932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
13-349
               

               
Cow position:
               
chr4:12676888-12676558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
116, 62
               

               
Conread position:
               
13-352
               

               
Cow position:
               
chr4:10379200-10378840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
13-356
               

               
Cow position:
               
chr4:12561129-12560778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
13-360
               

               
Cow position:
               
chr4:46550473-46550118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
13-367
               

               
Cow position:
               
chr4:34337183-34337535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 91
               

               
Conread position:
               
13-382
               

               
Cow position:
               
chr4:12049335-12048958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr4:37915247-37915659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
13-448
               

               
Cow position:
               
chr4:19314101-19313645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
13-448
               

               
Cow position:
               
chr4:40414539-40414991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-469
               

               
Cow position:
               
chr4:62472168-62471687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 247
               

               
Conread position:
               
13-474
               

               
Cow position:
               
chr4:21391723-21392182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
13-501
               

               
Cow position:
               
chr4:11194274-11193772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
13-505
               

               
Cow position:
               
chr4:25984309-25983821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chr4:4084361-4084872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chr4:7430409-7429902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 98
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chr4:37704354-37703848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 91
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chr4:45644229-45644729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 90
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chr4:52748368-52748873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chr4:61897446-61897950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 96
               

               
Conread position:
               
14-468
               

               
Cow position:
               
chr4:41602937-41602496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
14-505
               

               
Cow position:
               
chr4:20139429-20139944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
14-506
               

               
Cow position:
               
chr4:33970809-33971313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
14-506
               

               
Cow position:
               
chr4:66172703-66173213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 100
               

               
Conread position:
               
15-176
               

               
Cow position:
               
chr4:48422964-48422800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
15-196
               

               
Cow position:
               
chr4:46136837-46136656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
15-302
               

               
Cow position:
               
chr4:13344625-13344339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
15-337
               

               
Cow position:
               
chr4:5798051-5797733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
15-361
               

               
Cow position:
               
chr4:23846964-23847318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
15-363
               

               
Cow position:
               
chr4:33030635-33030292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
15-364
               

               
Cow position:
               
chr4:23509680-23509319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
15-498
               

               
Cow position:
               
chr4:13693585-13694078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chr4:22842432-22841932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 99
               

               
Conread position:
               
16-144
               

               
Cow position:
               
chr4:60141436-60141561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
16-224
               

               
Cow position:
               
chr4:13771317-13771525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
16-313
               

               
Cow position:
               
chr4:31505938-31506243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
16-506
               

               
Cow position:
               
chr4:12004300-12003806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 62
               

               
Conread position:
               
17-177
               

               
Cow position:
               
chr4:20505001-20505158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
17-303
               

               
Cow position:
               
chr4:68806096-68805823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
17-358
               

               
Cow position:
               
chr4:7571497-7571145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
17-449
               

               
Cow position:
               
chr4:18095589-18096020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 62
               

               
Conread position:
               
17-498
               

               
Cow position:
               
chr4:16799101-16799598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
18-134
               

               
Cow position:
               
chr4:29516917-29516800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 87
               

               
Conread position:
               
18-506
               

               
Cow position:
               
chr4:65179065-65179551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
19-196
               

               
Cow position:
               
chr4:13026386-13026207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
19-258
               

               
Cow position:
               
chr4:20147265-20147017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
19-506
               

               
Cow position:
               
chr4:10915753-10916241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 93
               

               
Conread position:
               
20-469
               

               
Cow position:
               
chr4:43865776-43866228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
21-218
               

               
Cow position:
               
chr4:51730031-51729835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
21-449
               

               
Cow position:
               
chr4:8947476-8947037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
22-247
               

               
Cow position:
               
chr4:45076997-45077233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
22-506
               

               
Cow position:
               
chr4:66111991-66112491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 86
               

               
Conread position:
               
23-482
               

               
Cow position:
               
chr4:16339524-16339983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
24-191
               

               
Cow position:
               
chr4:64657220-64657386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
24-196
               

               
Cow position:
               
chr4:41370863-41371036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
24-328
               

               
Cow position:
               
chr4:21232796-21233099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 84
               

               
Conread position:
               
24-328
               

               
Cow position:
               
chr4:25356242-25356534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
24-473
               

               
Cow position:
               
chr4:10992124-10992582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 21
               

               
Conread position:
               
25-382
               

               
Cow position:
               
chr4:19597247-19597603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
25-506
               

               
Cow position:
               
chr4:14743328-14742850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 124
               

               
Conread position:
               
26-323
               

               
Cow position:
               
chr4:19549068-19548773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
26-366
               

               
Cow position:
               
chr4:45114534-45114878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 5
               

               
Conread position:
               
27-173
               

               
Cow position:
               
chr4:19493630-19493480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
27-462
               

               
Cow position:
               
chr4:24744331-24744789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
28-429
               

               
Cow position:
               
chr4:65841693-65842091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
28-457
               

               
Cow position:
               
chr4:44665299-44665738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
29-197
               

               
Cow position:
               
chr4:46183486-46183314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
29-483
               

               
Cow position:
               
chr4:21065109-21064644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
29-503
               

               
Cow position:
               
chr4:47730931-47730456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
29-506
               

               
Cow position:
               
chr4:13590156-13589677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
31-324
               

               
Cow position:
               
chr4:44973705-44973418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
32-355
               

               
Cow position:
               
chr4:123140-123462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
32-505
               

               
Cow position:
               
chr4:15905172-15904691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
33-328
               

               
Cow position:
               
chr4:13222118-13222404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
33-356
               

               
Cow position:
               
chr4:31348117-31348456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
33-359
               

               
Cow position:
               
chr4:33612290-33612628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
33-383
               

               
Cow position:
               
chr4:620066-620445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 72
               

               
Conread position:
               
33-438
               

               
Cow position:
               
chr4:11187520-11187109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
33-506
               

               
Cow position:
               
chr4:23854249-23853781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr4:13043331-13043034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
34-348
               

               
Cow position:
               
chr4:27371796-27372110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
34-359
               

               
Cow position:
               
chr4:48235695-48235374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
141, 44
               

               
Conread position:
               
34-360
               

               
Cow position:
               
chr4:19008114-19007777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
34-416
               

               
Cow position:
               
chr4:57584174-57584554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
34-506
               

               
Cow position:
               
chr4:9137347-9136860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
35-498
               

               
Cow position:
               
chr4:19256351-19255914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
35-506
               

               
Cow position:
               
chr4:25806966-25806482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
36-292
               

               
Cow position:
               
chr4:44676259-44676001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
36-349
               

               
Cow position:
               
chr4:49089843-49089539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
36-360
               

               
Cow position:
               
chr4:2894097-2893758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
36-366
               

               
Cow position:
               
chr4:54930356-54930688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
226, 64
               

               
Conread position:
               
37-366
               

               
Cow position:
               
chr4:63349420-63349748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
38-123
               

               
Cow position:
               
chr4:4150115-4150031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
38-506
               

               
Cow position:
               
chr4:14470506-14470986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
39-301
               

               
Cow position:
               
chr4:11332160-11331888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
41-484
               

               
Cow position:
               
chr4:39231460-39231918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
41-506
               

               
Cow position:
               
chr4:27540680-27540203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
43-437
               

               
Cow position:
               
chr4:10905406-10905805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
41, 36
               

               
Conread position:
               
43-437
               

               
Cow position:
               
chr4:19265632-19265224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
43-496
               

               
Cow position:
               
chr4:24458047-24458507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
48-506
               

               
Cow position:
               
chr4:19497212-19497665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
50-423
               

               
Cow position:
               
chr4:275512-275131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
50-465
               

               
Cow position:
               
chr4:19142328-19141918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
51-333
               

               
Cow position:
               
chr4:14964828-14964544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
51-506
               

               
Cow position:
               
chr4:64072304-64072772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
52-196
               

               
Cow position:
               
chr4:12920319-12920176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
53-506
               

               
Cow position:
               
chr4:5610036-5610487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
61-297
               

               
Cow position:
               
chr4:3689745-3689511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
61-506
               

               
Cow position:
               
chr4:35939966-35940413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
62-506
               

               
Cow position:
               
chr4:22236444-22236893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
69-356
               

               
Cow position:
               
chr4:13832578-13832864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
69-360
               

               
Cow position:
               
chr4:20299305-20299003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
69-484
               

               
Cow position:
               
chr4:58834373-58834795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
70-196
               

               
Cow position:
               
chr4:2096351-2096225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 35
               

               
Conread position:
               
71-328
               

               
Cow position:
               
chr4:19463524-19463262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
71-366
               

               
Cow position:
               
chr4:44072740-44073042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
8, 76
               

               
Conread position:
               
71-506
               

               
Cow position:
               
chr4:65825815-65826283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
72-482
               

               
Cow position:
               
chr4:17124265-17124685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
73-401
               

               
Cow position:
               
chr4:60370800-60371145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
74-493
               

               
Cow position:
               
chr4:2422601-2422177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
77-436
               

               
Cow position:
               
chr4:22215630-22216004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
82-237
               

               
Cow position:
               
chr4:47047912-47047744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
83-322
               

               
Cow position:
               
chr4:51083357-51083584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr4:27687939-27687700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
87-328
               

               
Cow position:
               
chr4:33357948-33357703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
91-366
               

               
Cow position:
               
chr4:19438473-19438186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
91-373
               

               
Cow position:
               
chr4:67408535-67408261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
91-483
               

               
Cow position:
               
chr4:43369838-43370244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
91-506
               

               
Cow position:
               
chr4:53546037-53545624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
92-483
               

               
Cow position:
               
chr4:38181689-38181298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
93-344
               

               
Cow position:
               
chr4:33062899-33062663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
93-382
               

               
Cow position:
               
chr4:27511271-27510981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
93-440
               

               
Cow position:
               
chr4:48137918-48137562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
138, 14
               

               
Conread position:
               
93-504
               

               
Cow position:
               
chr4:56233688-56233277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
95-337
               

               
Cow position:
               
chr4:18576766-18577013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
96-506
               

               
Cow position:
               
chr4:561404-560985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
99-328
               

               
Cow position:
               
chr4:41907801-41908020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
107-322
               

               
Cow position:
               
chr4:34924697-34924915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 134
               

               
Conread position:
               
107-328
               

               
Cow position:
               
chr4:53999517-53999735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
108-359
               

               
Cow position:
               
chr4:26746475-26746219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
148, 90
               

               
Conread position:
               
108-506
               

               
Cow position:
               
chr4:30574442-30574038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
112-500
               

               
Cow position:
               
chr4:19307248-19306842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
117-467
               

               
Cow position:
               
chr4:20090605-20090946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
119-435
               

               
Cow position:
               
chr4:45900-45574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr4:14159155-14159547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
131-506
               

               
Cow position:
               
chr4:57931885-57931483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
133-483
               

               
Cow position:
               
chr4:3133224-3132888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
249, 70
               

               
Conread position:
               
134-438
               

               
Cow position:
               
chr4:53763156-53763465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
142-506
               

               
Cow position:
               
chr4:27291997-27292378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
144-486
               

               
Cow position:
               
chr4:54501492-54501847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
161-328
               

               
Cow position:
               
chr4:41292042-41292208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
161-506
               

               
Cow position:
               
chr4:46668507-46668167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 115
               

               
Conread position:
               
194-353
               

               
Cow position:
               
chr4:2536725-2536574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
194-454
               

               
Cow position:
               
chr4:480111-480373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
194-469
               

               
Cow position:
               
chr4:22072776-22073049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
194-477
               

               
Cow position:
               
chr4:65116314-65116601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
195-449
               

               
Cow position:
               
chr4:65168112-65168366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
197-506
               

               
Cow position:
               
chr4:18099083-18099385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
138, 38
               

               
Conread position:
               
202-365
               

               
Cow position:
               
chr4:19577952-19577792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 37
               
Show alignments to all cow chromosomes.