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Cow genome map

           
Conread name:
           
Thy1-THY010121B08
        

               
Conread position:
               
9-366
               

               
Cow position:
               
chrX:7425592-7425226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
9-366
               

               
Cow position:
               
chrX:29032535-29032179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chrX:18964703-18964886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
115, 63
               

               
Conread position:
               
10-492
               

               
Cow position:
               
chrX:5118372-5118853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 102
               

               
Conread position:
               
11-104
               

               
Cow position:
               
chrX:23358989-23359082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-104
               

               
Cow position:
               
chrX:40046453-40046546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-118
               

               
Cow position:
               
chrX:41164736-41164630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-123
               

               
Cow position:
               
chrX:25788780-25788894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-133
               

               
Cow position:
               
chrX:2936082-2935958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-133
               

               
Cow position:
               
chrX:16836164-16836285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-134
               

               
Cow position:
               
chrX:4467092-4466967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-134
               

               
Cow position:
               
chrX:29501759-29501881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
11-136
               

               
Cow position:
               
chrX:39290484-39290357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-137
               

               
Cow position:
               
chrX:27668833-27668961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-137
               

               
Cow position:
               
chrX:42479958-42479830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-142
               

               
Cow position:
               
chrX:42160748-42160618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
125, 94
               

               
Conread position:
               
11-143
               

               
Cow position:
               
chrX:16984765-16984632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
11-150
               

               
Cow position:
               
chrX:32942951-32943093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
11-150
               

               
Cow position:
               
chrX:45382921-45383061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
11-153
               

               
Cow position:
               
chrX:36848453-36848599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
11-161
               

               
Cow position:
               
chrX:4615886-4616035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
11-173
               

               
Cow position:
               
chrX:19394678-19394514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
11-173
               

               
Cow position:
               
chrX:45670347-45670183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
11-178
               

               
Cow position:
               
chrX:6599657-6599827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-179
               

               
Cow position:
               
chrX:24749210-24749043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
11-180
               

               
Cow position:
               
chrX:40531918-40532089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-186
               

               
Cow position:
               
chrX:1088018-1088191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
117, 92
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chrX:35985942-35985766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chrX:32977960-32978133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chrX:38208421-38208599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
11-192
               

               
Cow position:
               
chrX:19469381-19469563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chrX:27511553-27511367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 97
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chrX:46429694-46429881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chrX:918591-918788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 49
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chrX:4152906-4153096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chrX:4515815-4515623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chrX:18272933-18273119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
135, 94
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chrX:22115192-22115377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chrX:23562757-23562574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chrX:29050372-29050186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 93
               

               
Conread position:
               
11-196
               

               
Cow position:
               
chrX:45649007-45648812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
11-197
               

               
Cow position:
               
chrX:12095647-12095835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
11-200
               

               
Cow position:
               
chrX:5135394-5135591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
11-209
               

               
Cow position:
               
chrX:27306579-27306375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-209
               

               
Cow position:
               
chrX:33539295-33539099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
11-212
               

               
Cow position:
               
chrX:47650089-47650284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
173, 43
               

               
Conread position:
               
11-213
               

               
Cow position:
               
chrX:20957363-20957168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chrX:2523557-2523759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
11-226
               

               
Cow position:
               
chrX:34836939-34837158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chrX:169421-169646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chrX:29230124-29229900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chrX:30337833-30338054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
185, 52
               

               
Conread position:
               
11-234
               

               
Cow position:
               
chrX:38654316-38654542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-236
               

               
Cow position:
               
chrX:11851554-11851783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
11-237
               

               
Cow position:
               
chrX:26881440-26881683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-239
               

               
Cow position:
               
chrX:42927699-42927936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-248
               

               
Cow position:
               
chrX:34315646-34315399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chrX:19273582-19273849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-254
               

               
Cow position:
               
chrX:41871192-41870940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-255
               

               
Cow position:
               
chrX:34504924-34505178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
11-269
               

               
Cow position:
               
chrX:616134-616407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
11-269
               

               
Cow position:
               
chrX:31294447-31294703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-271
               

               
Cow position:
               
chrX:29585244-29584989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-274
               

               
Cow position:
               
chrX:20584453-20584174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
11-274
               

               
Cow position:
               
chrX:21986166-21986436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
11-274
               

               
Cow position:
               
chrX:34314149-34313889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
11-275
               

               
Cow position:
               
chrX:23561983-23561727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
11-297
               

               
Cow position:
               
chrX:41068850-41068564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-299
               

               
Cow position:
               
chrX:14275618-14275901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
11-306
               

               
Cow position:
               
chrX:6407668-6407376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chrX:22387125-22387421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-309
               

               
Cow position:
               
chrX:27145729-27145447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-312
               

               
Cow position:
               
chrX:31252532-31252239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
185, 34
               

               
Conread position:
               
11-316
               

               
Cow position:
               
chrX:32821153-32820847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chrX:35382912-35383203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chrX:36068140-36067836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-322
               

               
Cow position:
               
chrX:42235399-42235722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-324
               

               
Cow position:
               
chrX:31312154-31311835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-326
               

               
Cow position:
               
chrX:45110781-45110463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chrX:10252075-10252376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
78, 95
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chrX:34411971-34411646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chrX:40035315-40035639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
11-337
               

               
Cow position:
               
chrX:9425628-9425948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
11-340
               

               
Cow position:
               
chrX:38853322-38852987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
11-347
               

               
Cow position:
               
chrX:1499791-1499458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
11-348
               

               
Cow position:
               
chrX:37574965-37574636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-349
               

               
Cow position:
               
chrX:23091996-23091660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
11-354
               

               
Cow position:
               
chrX:7722113-7721758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chrX:9416559-9416921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chrX:17662473-17662825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chrX:21664596-21664951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chrX:35543012-35542663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 68
               

               
Conread position:
               
11-356
               

               
Cow position:
               
chrX:42380987-42381328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-359
               

               
Cow position:
               
chrX:5900587-5900226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
11-359
               

               
Cow position:
               
chrX:12979709-12980060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chrX:4768857-4768518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chrX:22074925-22074568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chrX:27431793-27432151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chrX:45174975-45174612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-361
               

               
Cow position:
               
chrX:9201673-9201314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chrX:38642374-38642026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-365
               

               
Cow position:
               
chrX:30420827-30421176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
11-365
               

               
Cow position:
               
chrX:38549572-38549211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chrX:1514294-1514642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
316, 67
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chrX:16283818-16284185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chrX:23513896-23514256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chrX:27393901-27394252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chrX:37119718-37119361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chrX:41884287-41884656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chrX:44961876-44961509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
11-367
               

               
Cow position:
               
chrX:39558224-39558587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
11-379
               

               
Cow position:
               
chrX:17542083-17541711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
11-380
               

               
Cow position:
               
chrX:25815778-25816150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
11-382
               

               
Cow position:
               
chrX:17726100-17725722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-388
               

               
Cow position:
               
chrX:9635066-9635437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
11-403
               

               
Cow position:
               
chrX:33493901-33493498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 95
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chrX:22482566-22482974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
11-413
               

               
Cow position:
               
chrX:618884-619296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
11-421
               

               
Cow position:
               
chrX:35273489-35273045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
11-437
               

               
Cow position:
               
chrX:33640100-33639653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
11-438
               

               
Cow position:
               
chrX:8925823-8925389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
11-457
               

               
Cow position:
               
chrX:38006645-38007103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
11-460
               

               
Cow position:
               
chrX:10411859-10412324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 99
               

               
Conread position:
               
11-464
               

               
Cow position:
               
chrX:40557554-40558018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-469
               

               
Cow position:
               
chrX:31436599-31436133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
11-475
               

               
Cow position:
               
chrX:43115275-43114818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 96
               

               
Conread position:
               
11-478
               

               
Cow position:
               
chrX:19690340-19689859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chrX:630185-630655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chrX:11614818-11614359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chrX:14973621-14974090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 67
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chrX:17888298-17888744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
136, 61
               

               
Conread position:
               
11-493
               

               
Cow position:
               
chrX:45502271-45501777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
11-496
               

               
Cow position:
               
chrX:13647660-13648158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
11-496
               

               
Cow position:
               
chrX:34402131-34401624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
11-498
               

               
Cow position:
               
chrX:8869277-8869761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-498
               

               
Cow position:
               
chrX:25035257-25035762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
11-499
               

               
Cow position:
               
chrX:11717658-11718155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
11-501
               

               
Cow position:
               
chrX:33855095-33855619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
11-503
               

               
Cow position:
               
chrX:38094395-38094906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 62
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chrX:6414166-6413664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 49
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chrX:34532645-34532149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chrX:42171171-42171681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chrX:37072514-37072023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
11-505
               

               
Cow position:
               
chrX:38218841-38218335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:917243-917760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:5017297-5017790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 24
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:6544379-6543872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 94
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:7695874-7695380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:8797374-8796867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 61
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:9650899-9651430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:11073066-11073595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:11656206-11655693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:12437147-12437619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:13177351-13177847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:14599657-14599152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 6
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:14883830-14884346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:15329767-15329269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:17795106-17794611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:17964397-17964901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:18694806-18695310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:27516644-27516150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:34377067-34376570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:34554848-34554351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:37232532-37232027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:40269617-40269092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:41192829-41192305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 94
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:41526404-41526902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:41878809-41879314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 61
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:42469816-42470321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:43730099-43730574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
11-506
               

               
Cow position:
               
chrX:45429897-45430403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
12-131
               

               
Cow position:
               
chrX:23088976-23088861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
12-173
               

               
Cow position:
               
chrX:4289568-4289401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
12-184
               

               
Cow position:
               
chrX:19943112-19943286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chrX:45977050-45976862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 99
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chrX:1466286-1466100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
12-212
               

               
Cow position:
               
chrX:5134596-5134398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
12-305
               

               
Cow position:
               
chrX:4399243-4398954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-326
               

               
Cow position:
               
chrX:29544754-29545072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
12-345
               

               
Cow position:
               
chrX:37780985-37781330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
12-349
               

               
Cow position:
               
chrX:11633806-11633457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
12-359
               

               
Cow position:
               
chrX:37910569-37910222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
12-364
               

               
Cow position:
               
chrX:21672683-21672315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
12-366
               

               
Cow position:
               
chrX:7513611-7513278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
12-399
               

               
Cow position:
               
chrX:35413734-35413353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
168, 61
               

               
Conread position:
               
12-402
               

               
Cow position:
               
chrX:8731216-8730799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
12-427
               

               
Cow position:
               
chrX:5919620-5919165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
12-427
               

               
Cow position:
               
chrX:45414180-45414605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 99
               

               
Conread position:
               
12-496
               

               
Cow position:
               
chrX:152024-151524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 15
               

               
Conread position:
               
12-505
               

               
Cow position:
               
chrX:35268984-35268510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 15
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chrX:9252039-9252556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chrX:29289701-29289192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chrX:30133195-30133692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
12-506
               

               
Cow position:
               
chrX:35387803-35388291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 94
               

               
Conread position:
               
13-179
               

               
Cow position:
               
chrX:11325975-11326144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
13-184
               

               
Cow position:
               
chrX:22392861-22393035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
13-187
               

               
Cow position:
               
chrX:25328493-25328658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
13-191
               

               
Cow position:
               
chrX:38560682-38560502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
13-196
               

               
Cow position:
               
chrX:40685205-40685392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
13-258
               

               
Cow position:
               
chrX:37986348-37986099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
133, 90
               

               
Conread position:
               
13-309
               

               
Cow position:
               
chrX:4278996-4279290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
13-329
               

               
Cow position:
               
chrX:7162179-7161876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 92
               

               
Conread position:
               
13-337
               

               
Cow position:
               
chrX:45846224-45845889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
62, 88
               

               
Conread position:
               
13-354
               

               
Cow position:
               
chrX:13382448-13382098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
13-360
               

               
Cow position:
               
chrX:11938810-11939156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
13-362
               

               
Cow position:
               
chrX:6690137-6690482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
13-363
               

               
Cow position:
               
chrX:32623694-32623348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
56, 95
               

               
Conread position:
               
13-377
               

               
Cow position:
               
chrX:29601705-29602077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
13-428
               

               
Cow position:
               
chrX:11313663-11314084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
120, 14
               

               
Conread position:
               
13-505
               

               
Cow position:
               
chrX:34565407-34564917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
13-506
               

               
Cow position:
               
chrX:35224419-35223918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
14-506
               

               
Cow position:
               
chrX:878258-878754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
14-506
               

               
Cow position:
               
chrX:24424279-24424776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 94
               

               
Conread position:
               
15-194
               

               
Cow position:
               
chrX:12082203-12082384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
15-279
               

               
Cow position:
               
chrX:38066334-38066604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
15-366
               

               
Cow position:
               
chrX:2029505-2029152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
216, 18
               

               
Conread position:
               
15-449
               

               
Cow position:
               
chrX:25338307-25337850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
15-495
               

               
Cow position:
               
chrX:34503041-34502550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chrX:4043746-4044242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 91
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chrX:11082501-11082998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
15-506
               

               
Cow position:
               
chrX:44054923-44054420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
16-356
               

               
Cow position:
               
chrX:3130692-3130353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 95
               

               
Conread position:
               
16-404
               

               
Cow position:
               
chrX:16762894-16762490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
25, 97
               

               
Conread position:
               
16-506
               

               
Cow position:
               
chrX:32743652-32743154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
16-506
               

               
Cow position:
               
chrX:38964228-38963729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
17-324
               

               
Cow position:
               
chrX:47362504-47362802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
18-196
               

               
Cow position:
               
chrX:48014553-48014374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 88
               

               
Conread position:
               
18-221
               

               
Cow position:
               
chrX:10516371-10516157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
19-366
               

               
Cow position:
               
chrX:34543900-34543549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
21-195
               

               
Cow position:
               
chrX:47345442-47345274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 86
               

               
Conread position:
               
21-506
               

               
Cow position:
               
chrX:26625557-26626073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
22-337
               

               
Cow position:
               
chrX:10831374-10831703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
22-356
               

               
Cow position:
               
chrX:40789320-40788976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
24-258
               

               
Cow position:
               
chrX:29680149-29680394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
24-366
               

               
Cow position:
               
chrX:42011393-42011042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
24-445
               

               
Cow position:
               
chrX:25713907-25713486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
24-449
               

               
Cow position:
               
chrX:7509251-7508800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 38
               

               
Conread position:
               
24-484
               

               
Cow position:
               
chrX:19879150-19878677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
24-496
               

               
Cow position:
               
chrX:4632745-4633224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 88
               

               
Conread position:
               
24-506
               

               
Cow position:
               
chrX:1615931-1616441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
24-506
               

               
Cow position:
               
chrX:7572017-7571519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
24-506
               

               
Cow position:
               
chrX:10865763-10866251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
24-506
               

               
Cow position:
               
chrX:12249927-12249417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
24-506
               

               
Cow position:
               
chrX:37489831-37489334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 84
               

               
Conread position:
               
25-351
               

               
Cow position:
               
chrX:6488686-6488363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
155, 16
               

               
Conread position:
               
26-366
               

               
Cow position:
               
chrX:38935389-38935043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
26-490
               

               
Cow position:
               
chrX:13913185-13912712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 223
               

               
Conread position:
               
27-397
               

               
Cow position:
               
chrX:7497351-7496974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
27-434
               

               
Cow position:
               
chrX:20377079-20376658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
27-506
               

               
Cow position:
               
chrX:39545870-39546363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 53
               

               
Conread position:
               
29-354
               

               
Cow position:
               
chrX:27771861-27772182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
29-359
               

               
Cow position:
               
chrX:36283447-36283114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
29-361
               

               
Cow position:
               
chrX:36976058-36975716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
54, 49
               

               
Conread position:
               
29-492
               

               
Cow position:
               
chrX:31250495-31250022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
33-196
               

               
Cow position:
               
chrX:36866276-36866110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
33-197
               

               
Cow position:
               
chrX:41111819-41111659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
33-385
               

               
Cow position:
               
chrX:27680501-27680146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
33-391
               

               
Cow position:
               
chrX:45598502-45598867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
33-496
               

               
Cow position:
               
chrX:11844138-11844612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
34-358
               

               
Cow position:
               
chrX:21642380-21642708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
34-506
               

               
Cow position:
               
chrX:31948833-31949314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
35-489
               

               
Cow position:
               
chrX:47344397-47343925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
38-506
               

               
Cow position:
               
chrX:26440687-26441164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
39-366
               

               
Cow position:
               
chrX:42498951-42499267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
40-176
               

               
Cow position:
               
chrX:44095356-44095217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
42-384
               

               
Cow position:
               
chrX:24365727-24366087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
42-506
               

               
Cow position:
               
chrX:47145179-47144692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
43-430
               

               
Cow position:
               
chrX:20710166-20709767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
51-447
               

               
Cow position:
               
chrX:5638084-5638493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
52-506
               

               
Cow position:
               
chrX:18294002-18293549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 23
               

               
Conread position:
               
53-506
               

               
Cow position:
               
chrX:13785280-13785762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
55-337
               

               
Cow position:
               
chrX:11589507-11589791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
55-378
               

               
Cow position:
               
chrX:678474-678820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
69-359
               

               
Cow position:
               
chrX:14900669-14900952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
69-364
               

               
Cow position:
               
chrX:26875817-26876117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
69-413
               

               
Cow position:
               
chrX:48676124-48675785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
69-496
               

               
Cow position:
               
chrX:34192734-34192307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
72-506
               

               
Cow position:
               
chrX:3405307-3405740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
227, 14
               

               
Conread position:
               
73-505
               

               
Cow position:
               
chrX:7718909-7718469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
75-366
               

               
Cow position:
               
chrX:23970438-23970151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
6, 32
               

               
Conread position:
               
78-484
               

               
Cow position:
               
chrX:43409064-43408639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
83-366
               

               
Cow position:
               
chrX:9855348-9855062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
83-420
               

               
Cow position:
               
chrX:19015487-19015144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
86-438
               

               
Cow position:
               
chrX:34991083-34990725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
91-200
               

               
Cow position:
               
chrX:5677849-5677958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
92-335
               

               
Cow position:
               
chrX:28835861-28836105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
92-470
               

               
Cow position:
               
chrX:25232634-25232238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
93-353
               

               
Cow position:
               
chrX:29509398-29509669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 122
               

               
Conread position:
               
100-506
               

               
Cow position:
               
chrX:38439514-38439092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 6
               

               
Conread position:
               
105-506
               

               
Cow position:
               
chrX:45412632-45413035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 21
               

               
Conread position:
               
106-503
               

               
Cow position:
               
chrX:48371119-48370714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 133
               

               
Conread position:
               
107-366
               

               
Cow position:
               
chrX:15305272-15305526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
109-397
               

               
Cow position:
               
chrX:23497642-23497931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 111
               

               
Conread position:
               
112-353
               

               
Cow position:
               
chrX:4750281-4750523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 131
               

               
Conread position:
               
112-506
               

               
Cow position:
               
chrX:20583044-20582646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
125-495
               

               
Cow position:
               
chrX:28098120-28097759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
129-366
               

               
Cow position:
               
chrX:10373321-10373069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
130-476
               

               
Cow position:
               
chrX:16732736-16733099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
130-506
               

               
Cow position:
               
chrX:28846876-28847266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
136-438
               

               
Cow position:
               
chrX:30162996-30162681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
137-482
               

               
Cow position:
               
chrX:1978509-1978136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
138-485
               

               
Cow position:
               
chrX:160034-160395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
140-367
               

               
Cow position:
               
chrX:6607406-6607182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chrX:42086851-42086478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chrX:43218396-43218007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
149-337
               

               
Cow position:
               
chrX:46315391-46315587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
155-506
               

               
Cow position:
               
chrX:38967628-38967267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 43
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chrX:24201138-24200839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
157, 63
               

               
Conread position:
               
171-354
               

               
Cow position:
               
chrX:40116371-40116199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
167, 14
               

               
Conread position:
               
171-360
               

               
Cow position:
               
chrX:30832897-30833070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
193-505
               

               
Cow position:
               
chrX:11674994-11674671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
132, 40
               

               
Conread position:
               
194-380
               

               
Cow position:
               
chrX:48536734-48536920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
133, 46
               

               
Conread position:
               
194-402
               

               
Cow position:
               
chrX:9997407-9997611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
133, 39
               

               
Conread position:
               
194-481
               

               
Cow position:
               
chrX:44731526-44731241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 39
               

               
Conread position:
               
194-488
               

               
Cow position:
               
chrX:11806085-11806383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 42
               

               
Conread position:
               
194-499
               

               
Cow position:
               
chrX:42461816-42462125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
195-420
               

               
Cow position:
               
chrX:41238443-41238661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
132, 10
               

               
Conread position:
               
195-487
               

               
Cow position:
               
chrX:29876144-29876416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
195-506
               

               
Cow position:
               
chrX:7806309-7805992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 38
               

               
Conread position:
               
195-506
               

               
Cow position:
               
chrX:32978326-32978641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 30
               

               
Conread position:
               
200-506
               

               
Cow position:
               
chrX:48287527-48287815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
164, 41
               
Show alignments to all cow chromosomes.