Cow genome map
| Conread name: | Thy1-THY010122C11 |
| Conread position: | 138-364 |
| Cow position: | chr1:89341991-89342221 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 96 |
| Conread position: | 145-362 |
| Cow position: | chr1:61737088-61736875 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 63 |
| Conread position: | 145-365 |
| Cow position: | chr1:21934182-21934401 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 145-365 |
| Cow position: | chr1:44506959-44506739 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 145-365 |
| Cow position: | chr1:79278455-79278671 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 146-282 |
| Cow position: | chr1:6734454-6734321 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 146-363 |
| Cow position: | chr1:77118543-77118754 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 146-370 |
| Cow position: | chr1:5062019-5061787 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 147-362 |
| Cow position: | chr1:82378780-82378568 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 90 |
| Conread position: | 147-365 |
| Cow position: | chr1:41735632-41735854 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 147-367 |
| Cow position: | chr1:97422307-97422527 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 39 |
| Conread position: | 147-381 |
| Cow position: | chr1:13056538-13056774 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 148-268 |
| Cow position: | chr1:46205808-46205687 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 148-279 |
| Cow position: | chr1:2997936-2997805 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 148-284 |
| Cow position: | chr1:38692654-38692518 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 148-300 |
| Cow position: | chr1:90413370-90413215 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 148-301 |
| Cow position: | chr1:75347612-75347451 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 148-304 |
| Cow position: | chr1:38525579-38525418 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 97, 37 |
| Conread position: | 148-305 |
| Cow position: | chr1:57782995-57782840 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 138, 38 |
| Conread position: | 148-310 |
| Cow position: | chr1:13195431-13195599 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 148-325 |
| Cow position: | chr1:89548181-89548000 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 148-329 |
| Cow position: | chr1:89443491-89443670 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 148-333 |
| Cow position: | chr1:765577-765770 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 148-358 |
| Cow position: | chr1:46839592-46839372 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 37, 125 |
| Conread position: | 148-360 |
| Cow position: | chr1:29975612-29975822 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 148-362 |
| Cow position: | chr1:14528205-14528426 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 37, 93 |
| Conread position: | 148-362 |
| Cow position: | chr1:69415722-69415943 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 39, 123 |
| Conread position: | 148-362 |
| Cow position: | chr1:85783515-85783299 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 148-363 |
| Cow position: | chr1:5162057-5162280 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 29, 124 |
| Conread position: | 148-363 |
| Cow position: | chr1:8869672-8869891 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 148-363 |
| Cow position: | chr1:13456130-13455916 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 130, 38 |
| Conread position: | 148-363 |
| Cow position: | chr1:26688484-26688706 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 148-363 |
| Cow position: | chr1:94526489-94526266 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 148-364 |
| Cow position: | chr1:2765401-2765188 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 148-364 |
| Cow position: | chr1:9443858-9444078 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 63 |
| Conread position: | 148-364 |
| Cow position: | chr1:31871416-31871192 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 148-364 |
| Cow position: | chr1:81161990-81161789 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 148-364 |
| Cow position: | chr1:93110630-93110854 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 37, 48 |
| Conread position: | 148-365 |
| Cow position: | chr1:3657374-3657596 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 138, 79 |
| Conread position: | 148-365 |
| Cow position: | chr1:6794934-6795165 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 127 |
| Conread position: | 148-365 |
| Cow position: | chr1:10719491-10719714 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 148-365 |
| Cow position: | chr1:56408607-56408384 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 148-365 |
| Cow position: | chr1:56643599-56643818 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 148-365 |
| Cow position: | chr1:64189488-64189273 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 148-365 |
| Cow position: | chr1:80973616-80973843 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 148-365 |
| Cow position: | chr1:90423093-90423315 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 148-365 |
| Cow position: | chr1:95765099-95765318 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 148-369 |
| Cow position: | chr1:16972852-16973072 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 148-384 |
| Cow position: | chr1:45638477-45638254 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 149-313 |
| Cow position: | chr1:5278424-5278594 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 150-344 |
| Cow position: | chr1:58825529-58825340 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 50 |
| Conread position: | 150-364 |
| Cow position: | chr1:57264007-57264215 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 150-364 |
| Cow position: | chr1:70533952-70534162 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 136, 36 |
| Conread position: | 150-364 |
| Cow position: | chr1:99095349-99095135 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 150-365 |
| Cow position: | chr1:30413575-30413356 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 150-365 |
| Cow position: | chr1:74947132-74947346 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 150-365 |
| Cow position: | chr1:78791319-78791535 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 150-365 |
| Cow position: | chr1:85411566-85411350 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 33, 74 |
| Conread position: | 150-367 |
| Cow position: | chr1:23099887-23099668 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 150-487 |
| Cow position: | chr1:45673698-45673360 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 151-364 |
| Cow position: | chr1:56477576-56477366 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 151-364 |
| Cow position: | chr1:81355721-81355932 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 151-364 |
| Cow position: | chr1:97619846-97620069 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 151-365 |
| Cow position: | chr1:7142860-7143078 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 151-367 |
| Cow position: | chr1:19482097-19482304 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 136, 19 |
| Conread position: | 151-367 |
| Cow position: | chr1:32341222-32341439 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 152-360 |
| Cow position: | chr1:81301107-81301319 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 62 |
| Conread position: | 152-364 |
| Cow position: | chr1:56748579-56748361 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 153-298 |
| Cow position: | chr1:52449621-52449770 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 153-365 |
| Cow position: | chr1:12595919-12596130 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 153-365 |
| Cow position: | chr1:12871027-12871236 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 154-362 |
| Cow position: | chr1:91142171-91142383 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 154-364 |
| Cow position: | chr1:71045740-71045526 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 13, 83 |
| Conread position: | 154-365 |
| Cow position: | chr1:29916393-29916185 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 32, 129 |
| Conread position: | 154-365 |
| Cow position: | chr1:39068971-39069180 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 30, 82 |
| Conread position: | 154-366 |
| Cow position: | chr1:57247419-57247207 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 154-368 |
| Cow position: | chr1:9869863-9870086 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 31, 116 |
| Conread position: | 155-349 |
| Cow position: | chr1:85651785-85651974 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 155-361 |
| Cow position: | chr1:97786164-97785958 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 155-365 |
| Cow position: | chr1:49131132-49131351 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 117 |
| Conread position: | 156-365 |
| Cow position: | chr1:25184114-25183896 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 156-365 |
| Cow position: | chr1:97622229-97622427 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 122, 30 |
| Conread position: | 156-374 |
| Cow position: | chr1:7800596-7800370 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 157-268 |
| Cow position: | chr1:44746846-44746735 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 157-354 |
| Cow position: | chr1:64938958-64939161 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 157-366 |
| Cow position: | chr1:6881244-6881454 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 157-366 |
| Cow position: | chr1:78750705-78750923 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 28, 114 |
| Conread position: | 157-371 |
| Cow position: | chr1:15691315-15691101 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 158-365 |
| Cow position: | chr1:34300567-34300777 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 158-365 |
| Cow position: | chr1:70282916-70282706 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 160-365 |
| Cow position: | chr1:35843957-35844159 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 137, 26 |
| Conread position: | 161-367 |
| Cow position: | chr1:51836548-51836340 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 110 |
| Conread position: | 163-364 |
| Cow position: | chr1:20521715-20521911 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 163-364 |
| Cow position: | chr1:34159811-34159603 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 163-364 |
| Cow position: | chr1:81277226-81277430 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 110 |
| Conread position: | 163-365 |
| Cow position: | chr1:24655936-24655731 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 163-365 |
| Cow position: | chr1:36932133-36931930 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 166-363 |
| Cow position: | chr1:67995104-67994902 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 166-364 |
| Cow position: | chr1:32244427-32244627 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 167-364 |
| Cow position: | chr1:50634429-50634634 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 167-367 |
| Cow position: | chr1:25856648-25856460 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 170-364 |
| Cow position: | chr1:10964257-10964066 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 170-364 |
| Cow position: | chr1:33986554-33986746 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 15 |
| Conread position: | 170-364 |
| Cow position: | chr1:71303098-71302912 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 170-365 |
| Cow position: | chr1:21835912-21835719 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 170-366 |
| Cow position: | chr1:4294024-4293832 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 170-367 |
| Cow position: | chr1:56073492-56073692 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 174-359 |
| Cow position: | chr1:70236323-70236515 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 11, 98 |
| Conread position: | 175-363 |
| Cow position: | chr1:44769148-44769339 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 175-364 |
| Cow position: | chr1:11770328-11770522 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 49, 55 |
| Conread position: | 175-369 |
| Cow position: | chr1:69941003-69941198 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 179-365 |
| Cow position: | chr1:58889338-58889523 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 184-364 |
| Cow position: | chr1:54162854-54163038 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 103, 88 |
| Conread position: | 186-311 |
| Cow position: | chr1:75199092-75198969 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 46 |
| Conread position: | 186-363 |
| Cow position: | chr1:31414010-31414186 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 48 |
| Conread position: | 194-364 |
| Cow position: | chr1:92010261-92010085 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 199-349 |
| Cow position: | chr1:40497518-40497366 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 84, 70 |
| Conread position: | 199-364 |
| Cow position: | chr1:67014326-67014155 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 199-364 |
| Cow position: | chr1:98613180-98613013 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 87, 70 |
| Conread position: | 200-364 |
| Cow position: | chr1:92642504-92642670 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 201-364 |
| Cow position: | chr1:10064038-10064207 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 207-363 |
| Cow position: | chr1:70933452-70933610 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 223-367 |
| Cow position: | chr1:48083471-48083324 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 46 |
| Conread position: | 235-364 |
| Cow position: | chr1:62996397-62996266 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 35 |
| Conread position: | 235-394 |
| Cow position: | chr1:66655427-66655276 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 135, 36 |
| Conread position: | 244-366 |
| Cow position: | chr1:76207898-76208023 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 250-364 |
| Cow position: | chr1:44836345-44836458 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.