Cow genome map


           Conread name:
           Thy1-THY010122C11
        

               Conread position:
               106-365
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               141-364
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               142, 8
               

               Conread position:
               145-365
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               10, 42
               

               Conread position:
               146-362
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               146-367
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               147-328
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 100
               

               Conread position:
               147-364
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               147-364
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               38, 125
               

               Conread position:
               147-365
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               38, 60
               

               Conread position:
               147-371
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               148-312
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               148-343
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               148-351
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               37, 87
               

               Conread position:
               148-358
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 101
               

               Conread position:
               148-363
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               148-363
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               37, 164
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               33, 125
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               175, 97
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               37, 122
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 117
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               148-367
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               148-381
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               149-364
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               150-364
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               17, 86
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               150-367
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               151-279
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 90
               

               Conread position:
               151-311
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               34, 66
               

               Conread position:
               151-321
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               151-345
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               34, 121
               

               Conread position:
               151-359
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               151-359
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               132, 35
               

               Conread position:
               151-361
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               151-362
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               151-364
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               34, 120
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               35, 126
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               34, 19
               

               Conread position:
               151-367
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               151-367
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               152-358
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               152-362
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               118, 43
               

               Conread position:
               152-365
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 23
               

               Conread position:
               155-364
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               155-364
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               131, 35
               

               Conread position:
               155-365
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 81
               

               Conread position:
               156-364
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               156-364
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               156-364
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               156-365
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 58
               

               Conread position:
               157-310
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               128, 24
               

               Conread position:
               157-353
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 114
               

               Conread position:
               157-362
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               10, 52
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               9, 107
               

               Conread position:
               158-279
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               27, 115
               

               Conread position:
               158-368
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               158-406
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               159-363
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               27, 112
               

               Conread position:
               160-365
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               138, 52
               

               Conread position:
               162-362
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 111
               

               Conread position:
               162-365
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               163-362
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               10, 111
               

               Conread position:
               166-358
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               166-361
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               5, 21
               

               Conread position:
               166-361
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 70
               

               Conread position:
               166-381
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               20, 60
               

               Conread position:
               167-328
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 100
               

               Conread position:
               167-364
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               169-365
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               170-363
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               116, 16
               

               Conread position:
               170-366
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               16, 67
               

               Conread position:
               171-358
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               171-364
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               172-365
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               172-367
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               13, 75
               

               Conread position:
               175-364
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               11, 49
               

               Conread position:
               176-364
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 95
               

               Conread position:
               177-361
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 60
               

               Conread position:
               179-368
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               182-364
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               59, 53
               

               Conread position:
               184-365
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               185-365
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               185-366
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 84
               

               Conread position:
               185-366
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               101, 84
               

               Conread position:
               185-367
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               189-365
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 46
               

               Conread position:
               199-364
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               206-363
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 18
               

               Conread position:
               236-361
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               236-362
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               
Show alignments to all cow chromosomes.