Cow genome map


           Conread name:
           Thy1-THY010122C11
        

               Conread position:
               96-365
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               138-362
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               47, 134
               

               Conread position:
               146-345
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               146-365
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               147-342
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               38, 86
               

               Conread position:
               147-362
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 85
               

               Conread position:
               147-366
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               133, 28
               

               Conread position:
               147-367
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               148-276
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 94
               

               Conread position:
               148-278
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               148-284
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               148-307
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               148-307
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               148-323
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               37, 125
               

               Conread position:
               148-362
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               40, 131
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 133
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 131
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               29, 38
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               148-366
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               37, 53
               

               Conread position:
               148-366
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               37, 82
               

               Conread position:
               148-369
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               148-382
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               22, 126
               

               Conread position:
               149-364
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 79
               

               Conread position:
               149-368
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 123
               

               Conread position:
               150-362
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               150-363
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               35, 58
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               36, 121
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               24, 81
               

               Conread position:
               151-344
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               151-358
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               151-362
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               34, 121
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               34, 92
               

               Conread position:
               152-335
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 75
               

               Conread position:
               152-367
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               153-363
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               153-365
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               86, 56
               

               Conread position:
               154-365
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               32, 72
               

               Conread position:
               154-367
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               155-365
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               28, 79
               

               Conread position:
               155-365
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               30, 117
               

               Conread position:
               156-364
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               130, 115
               

               Conread position:
               156-365
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               156-365
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               156-366
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               31, 81
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 114
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               157-367
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               157-381
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 114
               

               Conread position:
               158-365
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               159-365
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               159-365
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               160-303
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               162-364
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               162-365
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               23, 111
               

               Conread position:
               162-365
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               162-365
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               164-367
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               12, 75
               

               Conread position:
               166-343
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               166-365
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               167-365
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 80
               

               Conread position:
               167-367
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               170-364
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               172-362
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               175-364
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               8, 96
               

               Conread position:
               175-365
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               175-383
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               176-361
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               8, 59
               

               Conread position:
               185-364
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               185-365
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 71
               

               Conread position:
               186-365
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 38
               

               Conread position:
               189-365
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 46
               

               Conread position:
               190-329
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               96, 31
               

               Conread position:
               191-365
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               95, 8
               

               Conread position:
               206-366
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               75, 61
               

               Conread position:
               210-367
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.